Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO340G0222 Selaginella moellendorffii HOM05D007361 ORTHO05D009239 1.3e-50 202.6 95 100.0
CDE10G0162 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 8.0e-27 123.6 92 62.0
Aqoxy5G04283 Aquilegia oxysepala HOM05D007361 ORTHO05D009239 4.0e-26 121.3 81 69.1
Nn1g00257 Nelumbo nucifera HOM05D007361 ORTHO05D009239 4.0e-26 121.3 86 65.1
CDE10G0255 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 5.2e-26 120.9 85 64.7
AT5G42070 Arabidopsis thaliana HOM05D007361 ORTHO05D009239 8.8e-26 120.2 95 62.1
CANSAT21G1668 Cannabis sativa HOM05D007361 ORTHO05D009239 8.8e-26 120.2 66 80.3
HPP92_002926 Vanilla planifolia HOM05D007361 ORTHO05D009239 8.8e-26 120.2 87 64.4
AagrBONN_evm.TU.Sc2ySwM_362.1194 Anthoceros agrestis HOM05D007361 ORTHO05D009239 1.2e-25 119.8 85 61.2
Eucgr.D01759 Eucalyptus grandis HOM05D007361 ORTHO05D009239 1.2e-25 119.8 75 73.3
Thhalv10026457m.g Eutrema salsugineum HOM05D007361 ORTHO05D009239 1.2e-25 119.8 81 65.4
Prupe.5G122800 Prunus persica HOM05D007361 ORTHO05D009239 1.2e-25 119.8 66 77.3
Cpa.g.sc634.2 Carica papaya HOM05D007361 ORTHO05D009239 1.5e-25 119.4 91 63.7
RcHm_v2.0_Chr7g0194141 Rosa chinensis HOM05D007361 ORTHO05D009239 1.5e-25 119.4 66 78.8
Carub.0007s3327 Capsella rubella HOM05D007361 ORTHO05D009239 3.3e-25 118.2 90 64.4
Lj4g0006418 Lotus japonicus HOM05D007361 ORTHO05D009239 3.3e-25 118.2 66 75.8
Sabra01G0065600 Salix brachista HOM05D007361 ORTHO05D009239 4.4e-25 117.9 66 75.8
THA.LOC104817582 Tarenaya hassleriana HOM05D007361 ORTHO05D009239 4.4e-25 117.9 72 69.4
Lalb_Chr09g0332251 Lupinus albus HOM05D007361 ORTHO05D009239 5.7e-25 117.5 86 64.0
Potri.003G141700 Populus trichocarpa HOM05D007361 ORTHO05D009239 5.7e-25 117.5 71 71.8
Dinv37514 Davidia involucrata HOM05D007361 ORTHO05D009239 7.5e-25 117.1 75 72.0
Sp7g00060 Schrenkiella parvula HOM05D007361 ORTHO05D009239 7.5e-25 117.1 82 65.9
TAR629G1962 Trochodendron aralioides HOM05D007361 ORTHO05D009239 7.5e-25 117.1 80 67.5
Glyma.08G024100 Glycine max HOM05D007361 ORTHO05D009239 1.3e-24 116.3 71 73.2
Sabra03G0102300 Salix brachista HOM05D007361 ORTHO05D009239 1.3e-24 116.3 65 75.4
arahy.Tifrunner.gnm1.ann1.LM2PGP Arachis hypogaea HOM05D007361 ORTHO05D009239 1.7e-24 115.9 91 60.4
PSO782G1801 Papaver somniferum HOM05D007361 ORTHO05D009239 2.2e-24 115.5 89 62.9
arahy.Tifrunner.gnm1.ann1.F7VJVA Arachis hypogaea HOM05D007361 ORTHO05D009239 2.8e-24 115.2 82 64.6
Glyma.05G218000 Glycine max HOM05D007361 ORTHO05D009239 2.8e-24 115.2 82 64.6
Potri.001G089500 Populus trichocarpa HOM05D007361 ORTHO05D009239 2.8e-24 115.2 90 60.0
FvH4_5g04930 Fragaria vesca HOM05D007361 ORTHO05D009239 3.7e-24 114.8 66 74.2
FAN13G1516 Fragaria x ananassa HOM05D007361 ORTHO05D009239 3.7e-24 114.8 66 74.2
FAN18G1776 Fragaria x ananassa HOM05D007361 ORTHO05D009239 3.7e-24 114.8 66 74.2
FAN18G2902 Fragaria x ananassa HOM05D007361 ORTHO05D009239 3.7e-24 114.8 66 74.2
Mapoly0039s0013 Marchantia polymorpha HOM05D007361 ORTHO05D009239 3.7e-24 114.8 75 68.0
Sed0017120 Sechium edule HOM05D007361 ORTHO05D009239 3.7e-24 114.8 96 57.3
SEGI_33878 Sequoiadendron giganteum HOM05D007361 ORTHO05D009239 3.7e-24 114.8 75 65.3
Actinidia27311 Actinidia chinensis HOM05D007361 ORTHO05D009239 4.8e-24 114.4 65 73.8
Aa31LG9G130 Aethionema arabicum HOM05D007361 ORTHO05D009239 4.8e-24 114.4 83 63.9
Phvul.002G299900 Phaseolus vulgaris HOM05D007361 ORTHO05D009239 4.8e-24 114.4 86 64.0
CiPaw.12G081300 Carya illinoinensis HOM05D007361 ORTHO05D009239 6.3e-24 114.0 73 65.8
MELO3C016276.2 Cucumis melo HOM05D007361 ORTHO05D009239 6.3e-24 114.0 90 57.8
Lj2C163G16 Lonicera japonica HOM05D005144 ORTHO05D006112 6.3e-24 114.0 80 67.5
Manes.01G052200 Manihot esculenta HOM05D007361 ORTHO05D009239 6.3e-24 114.0 91 62.6
Os01g0235100 Oryza sativa ssp. japonica HOM05D007361 ORTHO05D009239 6.3e-24 114.0 71 70.4
PGR031G2691 Punica granatum HOM05D007361 ORTHO05D009239 6.3e-24 114.0 101 57.4
Sc01g0010390 Simmondsia chinensis HOM05D007361 ORTHO05D009239 6.3e-24 114.0 65 72.3
Thecc.03G300700 Theobroma cacao HOM05D007361 ORTHO05D009239 6.3e-24 114.0 84 61.9
Ah.12g052700 Amaranthus hybridus HOM05D007361 ORTHO05D009239 1.1e-23 113.2 65 72.3
ClCG07G011490 Citrullus lanatus HOM05D007361 ORTHO05D009239 1.1e-23 113.2 89 60.7
QL02p030053 Quercus lobata HOM05D007361 ORTHO05D009239 1.1e-23 113.2 65 73.8
A07p21120 Brassica napus HOM05D007361 ORTHO05D009239 1.4e-23 112.8 83 61.4
BraA07t29798Z Brassica rapa HOM05D007361 ORTHO05D009239 1.4e-23 112.8 83 61.4
Ciclev10024054m.g Citrus clementina HOM05D007361 ORTHO05D009239 1.4e-23 112.8 65 72.3
Gohir.A12G237900 Gossypium hirsutum HOM05D007361 ORTHO05D009239 1.4e-23 112.8 70 71.4
Gohir.D12G239000 Gossypium hirsutum HOM05D007361 ORTHO05D009239 1.4e-23 112.8 70 71.4
Gorai.008G256100 Gossypium raimondii HOM05D007361 ORTHO05D009239 1.4e-23 112.8 70 71.4
SalBow8G1606 Salvia bowleyana HOM05D007361 ORTHO05D009239 1.4e-23 112.8 66 71.2
BcaB02g07865 Brassica carinata HOM05D007361 ORTHO05D009239 1.8e-23 112.5 83 60.2
CARHR212500 Cardamine hirsuta HOM05D007361 ORTHO05D009239 1.8e-23 112.5 93 57.0
Ca_17469_v3 Cicer arietinum L. HOM05D007361 ORTHO05D009239 1.8e-23 112.5 87 62.1
Psat7g024200 Pisum sativum HOM05D007361 ORTHO05D009239 1.8e-23 112.5 65 72.3
Hund14207 Selenicereus undatus HOM05D007361 ORTHO05D009239 1.8e-23 112.5 65 72.3
TWI60G0282 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 1.8e-23 112.5 65 72.3
ATR0602G025 Amborella trichopoda HOM05D007361 ORTHO05D009239 2.4e-23 112.1 75 66.7
BcaC08g44581 Brassica carinata HOM05D007361 ORTHO05D009239 2.4e-23 112.1 83 61.4
C06p20480 Brassica napus HOM05D007361 ORTHO05D009239 2.4e-23 112.1 83 61.4
BolC4t26525H Brassica oleracea HOM05D000331 ORTHO05D000732 2.4e-23 112.1 82 64.6
BolC6t37229H Brassica oleracea HOM05D000331 ORTHO05D000732 2.4e-23 112.1 83 61.4
BcaC02g08893 Brassica carinata HOM05D007361 ORTHO05D009239 3.1e-23 111.7 71 70.4
C04p49390 Brassica napus HOM05D007361 ORTHO05D009239 3.1e-23 111.7 71 70.4
Haze_09090 Corylus avellana HOM05D007361 ORTHO05D009239 3.1e-23 111.7 79 65.8
AUR62019861 Chenopodium quinoa HOM05D007361 ORTHO05D009239 4.1e-23 111.3 65 69.2
DCAR_006523 Daucus carota HOM05D007361 ORTHO05D009239 4.1e-23 111.3 63 74.6
ECA246G3595 Erigeron canadensis HOM05D007361 ORTHO05D009239 4.1e-23 111.3 62 72.6
Migut.E01281 Erythranthe guttata HOM05D007361 ORTHO05D009239 4.1e-23 111.3 65 70.8
GSVIVG01019560001 Vitis vinifera HOM05D007361 ORTHO05D009239 4.1e-23 111.3 93 54.8
Medtr8g099615 Medicago truncatula HOM05D007361 ORTHO05D009239 7.0e-23 110.5 65 70.8
Atru.chr9.1927 Acer truncatum HOM05D001889 ORTHO05D009239 9.1e-23 110.2 73 65.8
Peaxi162Scf00074g00624 Petunia axillaris HOM05D007361 ORTHO05D009239 9.1e-23 110.2 64 73.4
SGA_v2.0_scaffold111G31398 Striga asiatica HOM05D007361 ORTHO05D009239 9.1e-23 110.2 65 69.2
TPR.G3427 Trifolium pratense HOM05D007361 ORTHO05D009239 9.1e-23 110.2 85 61.2
MSTRG.1799 Avicennia marina HOM05D007361 ORTHO05D009239 1.2e-22 109.8 81 64.2
CsaV3_4G006730 Cucumis sativus L. HOM05D007361 ORTHO05D009239 1.2e-22 109.8 91 57.1
Duzib205G2046 Durio zibethinus HOM05D007361 ORTHO05D009239 1.2e-22 109.8 91 57.1
TWI81G0394 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 1.2e-22 109.8 65 70.8
EL10Ac5g12938 Beta vulgaris HOM05D007361 ORTHO05D009239 1.6e-22 109.4 69 65.2
Solyc08g082570.4 Solanum lycopersicum HOM05D007361 ORTHO05D009239 1.6e-22 109.4 64 73.4
Nitab4.5_0000798g0080 Nicotiana tabacum HOM05D007361 ORTHO05D009239 3.5e-22 108.2 63 73.0
CSS0025387 Camellia sinensis var. sinensis HOM05D007361 ORTHO05D009239 4.5e-22 107.8 68 69.1
Nitab4.5_0008496g0040 Nicotiana tabacum HOM05D007361 ORTHO05D009239 4.5e-22 107.8 63 71.4
vmacro11341 Vaccinium macrocarpon HOM05D007361 ORTHO05D009239 4.5e-22 107.8 64 71.9
Actinidia22174 Actinidia chinensis HOM05D005144 ORTHO05D006112 7.7e-22 107.1 83 61.4
A04p15160 Brassica napus HOM05D007361 ORTHO05D009239 7.7e-22 107.1 71 69.0
CAN.G567.14 Capsicum annuum HOM05D007361 ORTHO05D009239 1.0e-21 106.7 74 64.9
Cc08_g16280 Coffea canephora HOM05D007361 ORTHO05D009239 1.0e-21 106.7 92 53.3
Pp3c20_23090 Physcomitrium patens HOM05D007361 ORTHO05D009239 1.0e-21 106.7 69 62.3
PGSC0003DMG400012265 Solanum tuberosum HOM05D007361 ORTHO05D009239 1.0e-21 106.7 91 60.4
unitig_0.g323 Utricularia gibba HOM05D007361 ORTHO05D009239 1.0e-21 106.7 70 64.3
Sopen08g030820 Solanum pennellii HOM05D007361 ORTHO05D009239 2.2e-21 105.5 91 58.2
HanXRQChr17g0534961 Helianthus annuus HOM05D007361 ORTHO05D009239 5.0e-21 104.4 87 59.8
Lsat_1_v5_gn_3_11260 Lactuca sativa HOM05D007361 ORTHO05D009239 2.5e-20 102.1 52 76.9
Rhsim02G0246000 Rhododendron simsii HOM05D007361 ORTHO05D009239 3.2e-20 101.7 85 57.6
CBR_g8730 Chara braunii HOM05D003343 ORTHO05D003787 2.3e-18 95.5 75 57.3
Cre02.g074100 Chlamydomonas reinhardtii HOM05D007361 ORTHO05D009239 1.6e-14 82.8 65 52.3
MCO14G090 Micromonas commoda HOM05D007361 ORTHO05D009239 2.7e-14 82.0 69 52.2
PRCOL_00001131 Prasinoderma coloniale HOM05D007361 ORTHO05D009239 3.5e-06 55.1 48 47.9


User provided reference genes

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