Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO340G0151 Selaginella moellendorffii HOM05D006349 ORTHO05D008205 4.6e-53 211.5 152 100.0
Mapoly0105s0011 Marchantia polymorpha HOM05D006349 ORTHO05D008205 4.0e-36 155.2 148 80.4
Pp3c20_23180 Physcomitrium patens HOM05D006349 ORTHO05D008205 1.9e-30 136.3 152 64.5
CANSAT80G2583 Cannabis sativa HOM05D006349 ORTHO05D008205 1.5e-27 126.7 150 59.3
TPR.G11993 Trifolium pratense HOM05D006349 ORTHO05D008205 2.0e-27 126.3 150 58.7
Psat7g112120 Pisum sativum HOM05D006349 ORTHO05D008205 9.8e-27 124.0 150 56.7
arahy.Tifrunner.gnm1.ann1.FR12T1 Arachis hypogaea HOM05D006349 ORTHO05D008205 1.3e-26 123.6 150 58.7
arahy.Tifrunner.gnm1.ann1.GD5F3R Arachis hypogaea HOM05D006349 ORTHO05D008205 1.3e-26 123.6 150 58.7
ClCG01G014390 Citrullus lanatus HOM05D006349 ORTHO05D008205 2.2e-26 122.9 150 58.7
AagrBONN_evm.TU.Sc2ySwM_362.857 Anthoceros agrestis HOM05D006349 ORTHO05D008205 2.8e-26 122.5 152 70.4
DCAR_015995 Daucus carota HOM05D006349 ORTHO05D008205 6.3e-26 121.3 150 57.3
AUR62021741 Chenopodium quinoa HOM05D006349 ORTHO05D008205 8.3e-26 120.9 146 58.9
AUR62008355 Chenopodium quinoa HOM05D006349 ORTHO05D008205 1.1e-25 120.6 145 59.3
HPP92_022919 Vanilla planifolia HOM05D006349 ORTHO05D008205 1.1e-25 120.6 146 56.2
HPP92_022931 Vanilla planifolia HOM05D006349 ORTHO05D008205 1.1e-25 120.6 146 56.2
MBI19_g30284_MAGBIO Magnolia biondii HOM05D006349 ORTHO05D008205 1.4e-25 120.2 150 57.3
CAN.G999.48 Capsicum annuum HOM05D006349 ORTHO05D008205 1.8e-25 119.8 150 58.7
MELO3C002208.2 Cucumis melo HOM05D006349 ORTHO05D008205 1.8e-25 119.8 150 57.3
HanXRQChr09g0271121 Helianthus annuus HOM05D006349 ORTHO05D008205 2.4e-25 119.4 150 58.0
PSO541G4605 Papaver somniferum HOM05D006349 ORTHO05D008205 3.1e-25 119.0 146 69.2
PSO781G0309 Papaver somniferum HOM05D006349 ORTHO05D008205 3.1e-25 119.0 146 59.6
CsaV3_1G007920 Cucumis sativus L. HOM05D006349 ORTHO05D008205 4.1e-25 118.6 150 57.3
Ca_25734_v3 Cicer arietinum L. HOM05D006349 ORTHO05D008205 5.4e-25 118.2 150 56.0
Nn4g23038 Nelumbo nucifera HOM05D006349 ORTHO05D008205 5.4e-25 118.2 150 57.3
EL10Ac5g10944 Beta vulgaris HOM05D006349 ORTHO05D008205 7.0e-25 117.9 146 58.2
FvH4_5g15500 Fragaria vesca HOM05D006349 ORTHO05D008205 7.0e-25 117.9 150 58.7
FAN18G4547 Fragaria x ananassa HOM05D006349 ORTHO05D008205 7.0e-25 117.9 150 58.7
PGSC0003DMG400025345 Solanum tuberosum HOM05D006349 ORTHO05D008205 7.0e-25 117.9 150 57.3
Zm00001eb160550 Zea mays HOM05D006349 ORTHO05D008205 7.0e-25 117.9 150 55.3
ECA232G0565 Erigeron canadensis HOM05D006349 ORTHO05D008205 1.2e-24 117.1 146 58.9
Solyc03g113240.3 Solanum lycopersicum HOM05D006349 ORTHO05D008205 1.2e-24 117.1 150 56.7
Sopen03g032300 Solanum pennellii HOM05D006349 ORTHO05D008205 1.2e-24 117.1 150 56.7
Thecc.03G079100 Theobroma cacao HOM05D006349 ORTHO05D008205 1.6e-24 116.7 150 62.7
FAN13G0390 Fragaria x ananassa HOM05D006349 ORTHO05D008205 2.0e-24 116.3 150 58.0
Gohir.A13G008300 Gossypium hirsutum HOM05D006349 ORTHO05D008205 2.0e-24 116.3 150 56.7
Gohir.D13G009000 Gossypium hirsutum HOM05D006349 ORTHO05D008205 2.0e-24 116.3 150 56.7
Gorai.013G009800 Gossypium raimondii HOM05D006349 ORTHO05D008205 2.0e-24 116.3 150 56.7
RcHm_v2.0_Chr7g0180591 Rosa chinensis HOM05D006349 ORTHO05D008205 2.0e-24 116.3 150 56.7
Atru.chr9.2318 Acer truncatum HOM05D006349 ORTHO05D008205 2.7e-24 115.9 150 55.3
Aqoxy3G03265 Aquilegia oxysepala HOM05D006349 ORTHO05D008205 2.7e-24 115.9 146 59.6
Cpa.g.sc17.203 Carica papaya HOM05D006349 ORTHO05D008205 2.7e-24 115.9 150 55.3
PGR083G1017 Punica granatum HOM05D006349 ORTHO05D008205 2.7e-24 115.9 150 54.7
Sc12g0006210 Simmondsia chinensis HOM05D006349 ORTHO05D008205 2.7e-24 115.9 146 58.2
Oeu006473.1 Olea europaea HOM05D006349 ORTHO05D008205 3.5e-24 115.5 150 54.7
Hma1.2p1_0104F.1_g050210 Hydrangea macrophylla HOM05D006349 ORTHO05D008205 5.9e-24 114.8 150 56.7
Phvul.009G190100 Phaseolus vulgaris HOM05D006349 ORTHO05D008205 5.9e-24 114.8 150 56.0
Migut.D01854 Erythranthe guttata HOM05D006349 ORTHO05D008205 7.7e-24 114.4 150 55.3
FAN04G0897 Fragaria x ananassa HOM05D006349 ORTHO05D008205 7.7e-24 114.4 150 56.7
Lj1g0000266 Lotus japonicus HOM05D006349 ORTHO05D008205 7.7e-24 114.4 150 54.7
Peaxi162Scf00009g00321 Petunia axillaris HOM05D006349 ORTHO05D008205 7.7e-24 114.4 150 56.0
Glyma.06G190300 Glycine max HOM05D006349 ORTHO05D008205 1.0e-23 114.0 150 54.7
Actinidia37657 Actinidia chinensis HOM05D006349 ORTHO05D008205 1.3e-23 113.6 145 56.6
CDE07G1088 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 1.3e-23 113.6 150 54.7
Dinv38665 Davidia involucrata HOM05D006349 ORTHO05D008205 1.3e-23 113.6 149 56.4
Glyma.04G174400 Glycine max HOM05D006349 ORTHO05D008205 1.3e-23 113.6 150 55.3
BcaC08g46899 Brassica carinata HOM05D006349 ORTHO05D008205 1.7e-23 113.2 150 55.3
C06p48760 Brassica napus HOM05D006349 ORTHO05D008205 1.7e-23 113.2 150 55.3
BraA07t31583Z Brassica rapa HOM05D006349 ORTHO05D008205 1.7e-23 113.2 150 55.3
MD06G1188100 Malus domestica HOM05D006349 ORTHO05D008205 1.7e-23 113.2 150 54.7
Potri.015G065100 Populus trichocarpa HOM05D006349 ORTHO05D008205 1.7e-23 113.2 150 54.7
QL10p015567 Quercus lobata HOM05D006349 ORTHO05D008205 1.7e-23 113.2 150 54.7
Sp5g29850 Schrenkiella parvula HOM05D006349 ORTHO05D008205 1.7e-23 113.2 150 54.7
Ciclev10022359m.g Citrus clementina HOM05D006349 ORTHO05D008205 2.2e-23 112.8 146 54.8
Lalb_Chr08g0235931 Lupinus albus HOM05D006349 ORTHO05D008205 2.2e-23 112.8 150 56.0
Nitab4.5_0000785g0220 Nicotiana tabacum HOM05D006349 ORTHO05D008205 2.9e-23 112.5 150 55.3
vmacro19434 Vaccinium macrocarpon HOM05D006349 ORTHO05D008205 2.9e-23 112.5 147 55.8
BolC6t39912H Brassica oleracea HOM05D006349 ORTHO05D008205 3.8e-23 112.1 150 55.3
CSS0001294 Camellia sinensis var. sinensis HOM05D006349 ORTHO05D008205 3.8e-23 112.1 147 56.5
Lsat_1_v5_gn_4_107320 Lactuca sativa HOM05D006349 ORTHO05D008205 3.8e-23 112.1 148 56.1
A07p40410 Brassica napus HOM05D006349 ORTHO05D008205 5.0e-23 111.7 150 54.7
Duzib068G1139 Durio zibethinus HOM05D006349 ORTHO05D008205 5.0e-23 111.7 146 56.8
GSVIVG01008063001 Vitis vinifera HOM05D006349 ORTHO05D008205 5.0e-23 111.7 146 55.5
Ah.02g113210 Amaranthus hybridus HOM05D006349 ORTHO05D008205 6.5e-23 111.3 145 56.6
ATR1120G128 Amborella trichopoda HOM05D006349 ORTHO05D008205 6.5e-23 111.3 150 52.7
BcaC03g15525 Brassica carinata HOM05D006349 ORTHO05D008205 6.5e-23 111.3 150 54.0
C02p32090 Brassica napus HOM05D006349 ORTHO05D008205 6.5e-23 111.3 150 54.0
BraA02t06992Z Brassica rapa HOM05D006349 ORTHO05D008205 6.5e-23 111.3 150 54.0
Eucgr.B00425 Eucalyptus grandis HOM05D006349 ORTHO05D008205 6.5e-23 111.3 150 53.3
Nitab4.5_0004605g0070 Nicotiana tabacum HOM05D006349 ORTHO05D008205 8.5e-23 110.9 150 54.7
CDE04G3639 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 1.1e-22 110.5 150 59.3
Prupe.5G186300 Prunus persica HOM05D006349 ORTHO05D008205 1.1e-22 110.5 150 63.3
TAR622G0703 Trochodendron aralioides HOM05D006349 ORTHO05D008205 1.1e-22 110.5 146 63.7
Aa31LG4G4960 Aethionema arabicum HOM05D006349 ORTHO05D008205 1.5e-22 110.2 150 56.0
CARHR068050 Cardamine hirsuta HOM05D006349 ORTHO05D008205 1.9e-22 109.8 150 52.0
Medtr4g089080 Medicago truncatula HOM05D006349 ORTHO05D008205 1.9e-22 109.8 150 54.7
BolC2t09244H Brassica oleracea HOM05D006349 ORTHO05D008205 2.5e-22 109.4 150 52.7
CiPaw.11G038000 Carya illinoinensis HOM05D006349 ORTHO05D008205 2.5e-22 109.4 150 52.7
Cc04_g15550 Coffea canephora HOM05D006349 ORTHO05D008205 3.2e-22 109.0 148 54.7
Lj9P459T48 Lonicera japonica HOM05D006349 ORTHO05D008205 3.2e-22 109.0 147 55.1
Os01g0585300 Oryza sativa ssp. japonica HOM05D006349 ORTHO05D008205 3.2e-22 109.0 150 54.0
Sed0016194 Sechium edule HOM05D006349 ORTHO05D008205 3.2e-22 109.0 150 53.3
SGA_v2.0_scaffold7G04081 Striga asiatica HOM05D006349 ORTHO05D008205 3.2e-22 109.0 146 56.8
Carub.0002s2152 Capsella rubella HOM05D006349 ORTHO05D008205 4.2e-22 108.6 150 53.3
Potri.012G070600 Populus trichocarpa HOM05D006349 ORTHO05D008205 4.2e-22 108.6 150 52.7
BcaB05g24870 Brassica carinata HOM05D003553 ORTHO05D005072 5.5e-22 108.2 150 52.7
Manes.06G096400 Manihot esculenta HOM05D006349 ORTHO05D008205 5.5e-22 108.2 146 54.1
AL2G34620 Arabidopsis lyrata HOM05D006349 ORTHO05D008205 9.5e-22 107.5 150 52.7
AT1G74730 Arabidopsis thaliana HOM05D006349 ORTHO05D008205 9.5e-22 107.5 150 52.7
COL.COLO4_05705 Corchorus olitorius HOM05D006349 ORTHO05D008205 9.5e-22 107.5 142 56.3
Thhalv10019168m.g Eutrema salsugineum HOM05D006349 ORTHO05D008205 9.5e-22 107.5 150 58.7
Hund02668 Selenicereus undatus HOM05D006349 ORTHO05D008205 2.1e-21 106.3 152 53.9
Sabra15G0090500 Salix brachista HOM05D006349 ORTHO05D008205 3.6e-21 105.5 146 54.1
SalBow7G1566 Salvia bowleyana HOM05D006349 ORTHO05D008205 4.7e-21 105.1 150 53.3
Cfa018991 Carpinus fangiana HOM05D006349 ORTHO05D008205 2.3e-20 102.8 150 51.3
TWI81G0140 Tripterygium wilfordii HOM05D006349 ORTHO05D008205 1.5e-19 100.1 146 51.4
BcaC08g46920 Brassica carinata HOM05D006349 ORTHO05D008205 7.5e-19 97.8 133 55.6
unitig_46.g18468 Utricularia gibba HOM05D006349 ORTHO05D008205 1.1e-17 94.0 150 49.3
MSTRG.4410 Avicennia marina HOM05D006349 ORTHO05D008205 3.1e-17 92.4 150 48.7
MD14G1194200 Malus domestica HOM05D006349 ORTHO05D008205 5.4e-17 91.7 150 50.0
FAN08G2244 Fragaria x ananassa HOM05D006349 ORTHO05D008205 1.1e-14 84.0 150 54.7
CBR_g48703 Chara braunii HOM05D006349 ORTHO05D008205 2.5e-14 82.8 150 56.0
SEGI_24937 Sequoiadendron giganteum HOM05D006349 ORTHO05D008205 4.3e-14 82.0 150 49.3
Pp3c24_420 Physcomitrium patens HOM05D006349 ORTHO05D008205 3.6e-13 79.0 152 54.6
Pp3c25_12400 Physcomitrium patens HOM05D006349 ORTHO05D008205 1.0e-12 77.4 110 59.1
Haze_07380 Corylus avellana HOM05D006349 ORTHO05D008205 1.7e-10 70.1 150 44.0
CARHR103880 Cardamine hirsuta HOM05D006349 ORTHO05D008205 1.4e-09 67.0 136 52.2
BcaC03g15526 Brassica carinata HOM05D006349 ORTHO05D008205 2.4e-09 66.2 70 55.7
Actinidia04919 Actinidia chinensis HOM05D006349 ORTHO05D008205 1.2e-08 63.9 41 65.9
SGA_v2.0_scaffold294G47475 Striga asiatica HOM05D006349 ORTHO05D008205 2.7e-08 62.8 121 38.0
A02p19550 Brassica napus HOM05D006349 ORTHO05D008205 1.5e-06 57.0 45 53.3


User provided reference genes

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