Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO340G0150 Selaginella moellendorffii HOM05D006638 ORTHO05D008246 3.9e-94 348.2 187 100.0
AagrBONN_evm.TU.Sc2ySwM_228.3890 Anthoceros agrestis HOM05D006638 ORTHO05D008246 1.0e-41 174.1 185 50.3
Mapoly0010s0011 Marchantia polymorpha HOM05D006638 ORTHO05D008246 1.4e-35 153.7 178 47.8
TAR636G0703 Trochodendron aralioides HOM05D006638 ORTHO05D008246 3.6e-31 139.0 170 47.1
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 1.0e-30 137.5 169 46.2
Pp3c1_23680 Physcomitrium patens HOM05D006638 ORTHO05D008246 3.1e-30 136.0 178 41.0
HPP92_022319 Vanilla planifolia HOM05D006638 ORTHO05D008246 4.0e-30 135.6 152 46.1
HPP92_022327 Vanilla planifolia HOM05D006638 ORTHO05D008246 4.0e-30 135.6 152 46.1
Thecc.01G384300 Theobroma cacao HOM05D006638 ORTHO05D008246 2.0e-29 133.3 168 47.0
COL.COLO4_12484 Corchorus olitorius HOM05D006638 ORTHO05D008246 4.4e-29 132.1 168 46.4
Hund17047 Selenicereus undatus HOM05D006638 ORTHO05D008246 4.4e-29 132.1 154 47.4
Cc02_g24450 Coffea canephora HOM05D006638 ORTHO05D008246 7.5e-29 131.3 145 49.0
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 7.5e-29 131.3 170 47.1
MSTRG.4914 Avicennia marina HOM05D006638 ORTHO05D008246 1.7e-28 130.2 152 49.3
Duzib133G1291 Durio zibethinus HOM05D006638 ORTHO05D008246 2.9e-28 129.4 173 45.7
Nn2g12739 Nelumbo nucifera HOM05D006638 ORTHO05D008246 2.9e-28 129.4 170 45.9
PSO170G5140 Papaver somniferum HOM05D006638 ORTHO05D008246 2.9e-28 129.4 152 49.3
Potri.004G225600 Populus trichocarpa HOM05D006638 ORTHO05D008246 2.9e-28 129.4 173 43.9
Atru.chr5.234 Acer truncatum HOM05D006638 ORTHO05D008246 3.7e-28 129.0 170 45.3
Cpa.g.sc49.148 Carica papaya HOM05D006638 ORTHO05D008246 3.7e-28 129.0 147 46.9
Lsat_1_v5_gn_4_45501 Lactuca sativa HOM05D006638 ORTHO05D008246 4.9e-28 128.6 169 46.2
CANSAT56G0739 Cannabis sativa HOM05D006638 ORTHO05D008246 6.4e-28 128.3 170 44.7
Sabra01G0171300 Salix brachista HOM05D006638 ORTHO05D008246 6.4e-28 128.3 173 44.5
FvH4_7g11040 Fragaria vesca HOM05D006638 ORTHO05D008246 8.3e-28 127.9 170 45.3
FAN06G4764 Fragaria x ananassa HOM05D006638 ORTHO05D008246 8.3e-28 127.9 170 45.3
Atru.BG.68.p Acer truncatum HOM05D006638 ORTHO05D008246 1.1e-27 127.5 170 44.7
RcHm_v2.0_Chr1g0349031 Rosa chinensis HOM05D006638 ORTHO05D008246 1.1e-27 127.5 147 47.6
CDE02G4315 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 1.4e-27 127.1 172 44.8
FAN03G2254 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.4e-27 127.1 178 45.5
Gohir.A12G095100 Gossypium hirsutum HOM05D006638 ORTHO05D008246 1.4e-27 127.1 168 44.0
Gorai.008G106400 Gossypium raimondii HOM05D006638 ORTHO05D008246 1.4e-27 127.1 168 44.0
Hma1.2p1_0001F.1_g001240 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 1.4e-27 127.1 170 44.1
Os10g0555200 Oryza sativa ssp. japonica HOM05D006638 ORTHO05D008246 1.4e-27 127.1 178 43.3
SGA_v2.0_scaffold43G16517 Striga asiatica HOM05D006638 ORTHO05D008246 1.9e-27 126.7 170 45.9
unitig_748.g7114 Utricularia gibba HOM05D006638 ORTHO05D008246 1.9e-27 126.7 170 44.1
EL10Ac1g00836 Beta vulgaris HOM05D006638 ORTHO05D008246 2.4e-27 126.3 174 43.7
Lj7A537T49 Lonicera japonica HOM05D006638 ORTHO05D008246 2.4e-27 126.3 171 43.9
Dinv44116 Davidia involucrata HOM05D006638 ORTHO05D008246 3.2e-27 125.9 168 43.5
Migut.N01611 Erythranthe guttata HOM05D006638 ORTHO05D008246 3.2e-27 125.9 170 44.1
Rhsim05G0215700 Rhododendron simsii HOM05D006638 ORTHO05D008246 4.1e-27 125.6 152 46.7
ClCG05G000210 Citrullus lanatus HOM05D006638 ORTHO05D008246 5.4e-27 125.2 145 45.5
FAN10G1288 Fragaria x ananassa HOM05D006638 ORTHO05D008246 5.4e-27 125.2 170 44.7
MD07G1114500 Malus domestica HOM05D006638 ORTHO05D008246 5.4e-27 125.2 147 48.3
SalBow1G6174 Salvia bowleyana HOM05D006638 ORTHO05D008246 5.4e-27 125.2 147 46.9
CsaV3_3G007360 Cucumis sativus L. HOM05D006638 ORTHO05D008246 7.0e-27 124.8 145 45.5
Lalb_Chr07g0190301 Lupinus albus HOM05D006638 ORTHO05D008246 7.0e-27 124.8 152 47.4
DCAR_029874 Daucus carota HOM05D006638 ORTHO05D008246 9.2e-27 124.4 168 44.6
FAN10G2039 Fragaria x ananassa HOM05D006638 ORTHO05D008246 9.2e-27 124.4 170 44.7
Nitab4.5_0011151g0010 Nicotiana tabacum HOM05D006638 ORTHO05D008246 9.2e-27 124.4 170 44.1
Sc23g0003780 Simmondsia chinensis HOM05D006638 ORTHO05D008246 9.2e-27 124.4 129 50.4
Psat0s3685g0120 Pisum sativum HOM05D006638 ORTHO05D008246 1.2e-26 124.0 168 44.6
Solyc01g090880.3 Solanum lycopersicum HOM05D006638 ORTHO05D008246 1.2e-26 124.0 176 43.8
Sopen01g036620 Solanum pennellii HOM05D006638 ORTHO05D008246 1.2e-26 124.0 176 43.8
PGSC0003DMG400025975 Solanum tuberosum HOM05D006638 ORTHO05D008246 1.2e-26 124.0 176 43.8
Haze_02520 Corylus avellana HOM05D006638 ORTHO05D008246 1.6e-26 123.6 168 43.5
Nitab4.5_0000859g0190 Nicotiana tabacum HOM05D006638 ORTHO05D008246 1.6e-26 123.6 178 42.7
Prupe.2G137100 Prunus persica HOM05D006638 ORTHO05D008246 2.0e-26 123.2 170 45.9
ATR0317G113 Amborella trichopoda HOM05D006638 ORTHO05D008246 2.7e-26 122.9 142 47.2
BolC8t52292H Brassica oleracea HOM05D006638 ORTHO05D008246 2.7e-26 122.9 147 48.3
CARHR012550 Cardamine hirsuta HOM05D006638 ORTHO05D008246 2.7e-26 122.9 147 47.6
Ca_19858_v3 Cicer arietinum L. HOM05D006638 ORTHO05D008246 2.7e-26 122.9 145 44.1
THA.LOC104809455 Tarenaya hassleriana HOM05D006638 ORTHO05D008246 2.7e-26 122.9 172 42.4
Carub.0001s1192 Capsella rubella HOM05D006638 ORTHO05D008246 4.6e-26 122.1 172 43.6
AT1G12244 Arabidopsis thaliana HOM05D006638 ORTHO05D008246 6.0e-26 121.7 147 46.9
arahy.Tifrunner.gnm1.ann1.WQW1G6 Arachis hypogaea HOM05D006638 ORTHO05D008246 1.0e-25 120.9 152 46.1
Lj3g0022109 Lotus japonicus HOM05D006638 ORTHO05D008246 1.0e-25 120.9 145 43.4
QL04p037061 Quercus lobata HOM05D006638 ORTHO05D008246 1.0e-25 120.9 168 42.3
Glyma.03G033200 Glycine max HOM05D006638 ORTHO05D008246 1.3e-25 120.6 145 44.8
Aa31LG1G2420 Aethionema arabicum HOM05D006638 ORTHO05D008246 1.7e-25 120.2 147 46.9
BcaC07g41715 Brassica carinata HOM05D006638 ORTHO05D008246 1.7e-25 120.2 147 47.6
C08p47510 Brassica napus HOM05D006638 ORTHO05D008246 1.7e-25 120.2 147 47.6
Aqoxy7G00747 Aquilegia oxysepala HOM05D006638 ORTHO05D008246 2.3e-25 119.8 147 46.9
AL1G23530 Arabidopsis lyrata HOM05D006638 ORTHO05D008246 2.3e-25 119.8 147 45.6
ECA234G0121 Erigeron canadensis HOM05D006638 ORTHO05D008246 2.3e-25 119.8 168 43.5
Eucgr.H00160 Eucalyptus grandis HOM05D006638 ORTHO05D008246 2.3e-25 119.8 168 44.6
Medtr4g027430 Medicago truncatula HOM05D006638 ORTHO05D008246 2.3e-25 119.8 146 48.6
BcaC07g42567 Brassica carinata HOM05D006638 ORTHO05D008246 3.0e-25 119.4 147 46.3
HanXRQChr12g0384211 Helianthus annuus HOM05D006638 ORTHO05D008246 3.9e-25 119.0 168 43.5
BraA09t41748Z Brassica rapa HOM05D006638 ORTHO05D008246 5.0e-25 118.6 147 46.3
Thhalv10008640m.g Eutrema salsugineum HOM05D006638 ORTHO05D008246 5.0e-25 118.6 147 46.9
CiPaw.14G025400 Carya illinoinensis HOM05D006638 ORTHO05D008246 6.6e-25 118.2 168 41.7
Zm00001eb023510 Zea mays HOM05D006638 ORTHO05D008246 6.6e-25 118.2 126 51.6
Lj1g0022300 Lotus japonicus HOM05D006638 ORTHO05D008246 8.6e-25 117.9 129 45.0
TWI23G0519 Tripterygium wilfordii HOM05D006638 ORTHO05D008246 1.5e-24 117.1 145 46.2
CAN.G1872.5 Capsicum annuum HOM05D006638 ORTHO05D008246 2.5e-24 116.3 176 42.6
TAR629G0886 Trochodendron aralioides HOM05D006638 ORTHO05D008246 4.3e-24 115.5 170 43.5
arahy.Tifrunner.gnm1.ann1.B645Y9 Arachis hypogaea HOM05D006638 ORTHO05D008246 1.6e-23 113.6 175 41.7
Pp3c1_23620 Physcomitrium patens HOM05D006638 ORTHO05D008246 4.7e-23 112.1 152 39.5
Gohir.D12G097700 Gossypium hirsutum HOM05D006638 ORTHO05D008246 1.4e-22 110.5 121 48.8
Manes.17G011000 Manihot esculenta HOM05D006638 ORTHO05D008246 1.4e-22 110.5 126 50.0
PGR142G0596 Punica granatum HOM05D006638 ORTHO05D008246 3.4e-21 105.9 214 36.0
MELO3C005958.2 Cucumis melo HOM05D006638 ORTHO05D008246 7.5e-21 104.8 129 44.2
Phvul.010G071600 Phaseolus vulgaris HOM05D006638 ORTHO05D008246 1.3e-20 104.0 121 45.5
Sed0019776 Sechium edule HOM05D006638 ORTHO05D008246 1.7e-20 103.6 128 46.1
Ah.01g003990 Amaranthus hybridus HOM05D006638 ORTHO05D008246 1.4e-19 100.5 105 48.6
TPR.G27556 Trifolium pratense HOM05D006638 ORTHO05D008246 3.2e-19 99.4 105 49.5
Sp1g10860 Schrenkiella parvula HOM05D006638 ORTHO05D008246 9.2e-19 97.8 160 40.6
CBR_g17705 Chara braunii HOM05D006638 ORTHO05D008246 1.6e-18 97.1 109 46.8
Peaxi162Scf00803g00218 Petunia axillaris HOM05D006638 ORTHO05D008246 3.5e-18 95.9 176 38.6
FAN01G0965 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.0e-17 94.4 98 51.0
Actinidia33482 Actinidia chinensis HOM05D006638 ORTHO05D008246 5.1e-17 92.0 173 37.0
vmacro21035 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 6.6e-17 91.7 106 49.1
VMungo0331G0589 Vigna mungo HOM05D006638 ORTHO05D008246 8.6e-17 91.3 145 37.2
Hma1.2p1_0001F.1_g001250 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 1.9e-16 90.1 106 48.1
CSS0019813 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 4.7e-15 85.5 101 44.6
CSS0044007 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 4.7e-15 85.5 101 44.6
Rhsim01G0151400 Rhododendron simsii HOM05D006638 ORTHO05D008246 3.1e-14 82.8 83 48.2
Medtr2g064690 Medicago truncatula HOM05D006638 ORTHO05D008246 1.2e-13 80.9 117 44.4
Oeu000021.1 Olea europaea HOM05D006638 ORTHO05D008246 1.5e-13 80.5 107 43.9
CSS0006996 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 2.0e-13 80.1 109 41.3
MBI04_g09497_MAGBIO Magnolia biondii HOM05D006638 ORTHO05D008246 6.4e-12 75.1 128 39.8
CSS0041268 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 2.7e-10 69.7 101 41.6


User provided reference genes

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