Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO340G0149 Selaginella moellendorffii HOM05D006956 ORTHO05D008824 9.1e-107 390.2 189 100.0
AagrBONN_evm.TU.Sc2ySwM_368.712 Anthoceros agrestis HOM05D006956 ORTHO05D008824 3.9e-49 198.7 182 50.0
Prupe.4G139000 Prunus persica HOM05D006956 ORTHO05D008824 1.3e-44 183.7 187 46.0
COL.COLO4_07377 Corchorus olitorius HOM05D006956 ORTHO05D008824 9.2e-43 177.6 189 46.0
Pp3c4_6830 Physcomitrium patens HOM05D006956 ORTHO05D008824 3.5e-42 175.6 189 47.6
Pp3c4_6840 Physcomitrium patens HOM05D006956 ORTHO05D008824 3.5e-42 175.6 184 45.1
Thecc.07G151600 Theobroma cacao HOM05D006956 ORTHO05D008824 6.0e-42 174.9 187 44.9
MELO3C019670.2 Cucumis melo HOM05D006956 ORTHO05D008824 7.8e-42 174.5 189 43.4
Dinv19614 Davidia involucrata HOM05D006956 ORTHO05D008824 7.8e-42 174.5 189 44.4
MD10G1203100 Malus domestica HOM05D006956 ORTHO05D008824 7.8e-42 174.5 189 44.4
Peaxi162Scf00286g00448 Petunia axillaris HOM05D006956 ORTHO05D008824 7.8e-42 174.5 189 43.9
CsaV3_6G013760 Cucumis sativus L. HOM05D006956 ORTHO05D008824 3.0e-41 172.6 190 43.7
FAN21G1707 Fragaria x ananassa HOM05D006956 ORTHO05D008824 3.0e-41 172.6 186 44.6
Gorai.007G335600 Gossypium raimondii HOM05D006956 ORTHO05D008824 3.9e-41 172.2 187 44.4
Cc05_g16140 Coffea canephora HOM05D006956 ORTHO05D008824 6.6e-41 171.4 190 42.1
Gohir.A11G291500 Gossypium hirsutum HOM05D006956 ORTHO05D008824 6.6e-41 171.4 187 44.4
FvH4_3g15651 Fragaria vesca HOM05D006956 ORTHO05D008824 1.1e-40 170.6 186 44.1
Aqoxy1G01495 Aquilegia oxysepala HOM05D006956 ORTHO05D008824 1.5e-40 170.2 186 44.1
CSS0020916 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 1.9e-40 169.9 186 44.1
TWI39G0297 Tripterygium wilfordii HOM05D006956 ORTHO05D008824 1.9e-40 169.9 189 42.9
Potri.001G439000 Populus trichocarpa HOM05D006956 ORTHO05D008824 2.5e-40 169.5 189 43.4
QL04p076576 Quercus lobata HOM05D006956 ORTHO05D008824 2.5e-40 169.5 189 42.9
Solyc09g098220.3 Solanum lycopersicum HOM05D006956 ORTHO05D008824 2.5e-40 169.5 189 42.3
Sopen09g036160 Solanum pennellii HOM05D006956 ORTHO05D008824 2.5e-40 169.5 189 42.3
BraA09t41455Z Brassica rapa HOM05D006956 ORTHO05D008824 3.3e-40 169.1 190 42.6
RcHm_v2.0_Chr5g0026331 Rosa chinensis HOM05D006956 ORTHO05D008824 3.3e-40 169.1 186 44.1
VMungo1080G0523 Vigna mungo HOM05D006956 ORTHO05D008824 3.3e-40 169.1 189 44.4
Eucgr.A00498 Eucalyptus grandis HOM05D006956 ORTHO05D008824 4.3e-40 168.7 189 44.4
Rhsim04G0005600 Rhododendron simsii HOM05D006956 ORTHO05D008824 4.3e-40 168.7 186 43.5
CAN.G710.39 Capsicum annuum HOM05D006956 ORTHO05D008824 5.6e-40 168.3 191 41.9
Nn7g38051 Nelumbo nucifera HOM05D006956 ORTHO05D008824 5.6e-40 168.3 186 43.0
C08p44410 Brassica napus HOM05D006956 ORTHO05D008824 9.6e-40 167.5 190 41.6
Sabra16G0296900 Salix brachista HOM05D006956 ORTHO05D008824 9.6e-40 167.5 195 42.6
TAR362G0399 Trochodendron aralioides HOM05D006956 ORTHO05D008824 9.6e-40 167.5 189 41.8
A09p60820 Brassica napus HOM05D006956 ORTHO05D008824 1.6e-39 166.8 190 42.1
BolC8t51982H Brassica oleracea HOM05D006956 ORTHO05D008824 1.6e-39 166.8 190 42.1
Phvul.005G057800 Phaseolus vulgaris HOM05D006956 ORTHO05D008824 1.6e-39 166.8 189 42.9
PGR142G1185 Punica granatum HOM05D006956 ORTHO05D008824 1.6e-39 166.8 187 44.9
Cfa010806 Carpinus fangiana HOM05D006956 ORTHO05D008824 2.8e-39 166.0 187 42.8
ClCG02G018480 Citrullus lanatus HOM05D006956 ORTHO05D008824 2.8e-39 166.0 208 40.9
Ciclev10022296m.g Citrus clementina HOM05D006956 ORTHO05D008824 2.8e-39 166.0 186 44.1
TPR.G9744 Trifolium pratense HOM05D006956 ORTHO05D008824 2.8e-39 166.0 188 44.7
AL1G28750 Arabidopsis lyrata HOM05D006956 ORTHO05D008824 6.2e-39 164.9 188 40.4
Hma1.2p1_0334F.1_g128720 Hydrangea macrophylla HOM05D006956 ORTHO05D008824 6.2e-39 164.9 187 42.8
arahy.Tifrunner.gnm1.ann1.JC2BA5 Arachis hypogaea HOM05D006956 ORTHO05D008824 8.1e-39 164.5 189 43.4
CiPaw.11G066300 Carya illinoinensis HOM05D006956 ORTHO05D008824 8.1e-39 164.5 187 41.7
Glyma.15G256600 Glycine max HOM05D006956 ORTHO05D008824 8.1e-39 164.5 184 43.5
Migut.H01688 Erythranthe guttata HOM05D006956 ORTHO05D008824 1.1e-38 164.1 186 42.5
Lalb_Chr20g0108711 Lupinus albus HOM05D006956 ORTHO05D008824 1.1e-38 164.1 189 42.3
HPP92_011671 Vanilla planifolia HOM05D006956 ORTHO05D008824 1.1e-38 164.1 187 41.2
CDE05G1956 Ceratophyllum demersum HOM05D003342 ORTHO05D003861 1.4e-38 163.7 187 40.6
Lj3g0018815 Lotus japonicus HOM05D006956 ORTHO05D008824 1.4e-38 163.7 187 42.2
Manes.06G172400 Manihot esculenta HOM05D006956 ORTHO05D008824 5.3e-38 161.8 189 43.9
THA.LOC104808124 Tarenaya hassleriana HOM05D006956 ORTHO05D008824 5.3e-38 161.8 187 43.9
Atru.chr9.1519 Acer truncatum HOM05D006956 ORTHO05D008824 6.9e-38 161.4 190 44.2
CANSAT54G1214 Cannabis sativa HOM05D006956 ORTHO05D008824 6.9e-38 161.4 188 42.0
Medtr2g069340 Medicago truncatula HOM05D006956 ORTHO05D008824 6.9e-38 161.4 188 43.1
Zm00001eb198240 Zea mays HOM05D006956 ORTHO05D008824 6.9e-38 161.4 188 40.4
vmacro00957 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 9.0e-38 161.0 187 41.7
Haze_03154 Corylus avellana HOM05D006956 ORTHO05D008824 1.2e-37 160.6 187 41.2
Psat1g012040 Pisum sativum HOM05D006956 ORTHO05D008824 1.2e-37 160.6 188 43.6
Lj3g0016125 Lotus japonicus HOM05D006956 ORTHO05D008824 2.0e-37 159.8 188 40.4
MSTRG.13068 Avicennia marina HOM05D006956 ORTHO05D008824 2.6e-37 159.5 185 40.5
AUR62042418 Chenopodium quinoa HOM05D006956 ORTHO05D008824 2.6e-37 159.5 184 42.4
FAN11G3326 Fragaria x ananassa HOM05D006956 ORTHO05D008824 2.6e-37 159.5 203 40.4
CARHR017060 Cardamine hirsuta HOM05D006956 ORTHO05D008824 5.8e-37 158.3 189 39.2
SalBow5G4858 Salvia bowleyana HOM05D006956 ORTHO05D008824 9.9e-37 157.5 187 40.6
CSS0000379 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 1.3e-36 157.1 188 42.6
Thhalv10008810m.g Eutrema salsugineum HOM05D006956 ORTHO05D008824 1.3e-36 157.1 188 41.0
AT1G16590 Arabidopsis thaliana HOM05D006956 ORTHO05D008824 1.7e-36 156.8 189 38.6
AUR62026907 Chenopodium quinoa HOM05D006956 ORTHO05D008824 2.9e-36 156.0 184 42.9
Nitab4.5_0001526g0100 Nicotiana tabacum HOM05D006956 ORTHO05D008824 1.4e-35 153.7 213 37.6
Carub.0001s1634 Capsella rubella HOM05D006956 ORTHO05D008824 1.9e-35 153.3 185 40.5
Ca_03670_v3 Cicer arietinum L. HOM05D006956 ORTHO05D008824 3.2e-35 152.5 187 40.6
PGSC0003DMG400014067 Solanum tuberosum HOM05D006956 ORTHO05D008466 4.2e-35 152.1 188 39.9
Aa31LG7G1120 Aethionema arabicum HOM05D006956 ORTHO05D008824 1.0e-33 147.5 197 38.6
arahy.Tifrunner.gnm1.ann1.82TPB7 Arachis hypogaea HOM05D006956 ORTHO05D008824 6.6e-33 144.8 220 36.8
PSO210G3417 Papaver somniferum HOM05D006956 ORTHO05D008824 1.1e-32 144.1 190 36.8
PSO223G0077 Papaver somniferum HOM05D006956 ORTHO05D008824 2.5e-32 142.9 190 36.3
MBI18_g45405_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 3.3e-32 142.5 151 43.7
HanXRQChr08g0231891 Helianthus annuus HOM05D006956 ORTHO05D008824 7.3e-32 141.4 188 37.2
Cfa010808 Carpinus fangiana HOM05D006956 ORTHO05D008824 4.8e-31 138.7 170 39.4
ECA247G3084 Erigeron canadensis HOM05D006956 ORTHO05D008824 4.8e-31 138.7 192 38.5
GSVIVG01020406001 Vitis vinifera HOM05D006956 ORTHO05D008824 3.1e-30 136.0 162 40.1
Sed0013658 Sechium edule HOM05D006956 ORTHO05D008824 9.0e-30 134.4 148 43.9
SGA_v2.0_scaffold49G18176 Striga asiatica HOM05D006956 ORTHO05D008824 1.2e-29 134.0 184 36.4
Mapoly0023s0023 Marchantia polymorpha HOM05D006956 ORTHO05D008824 3.4e-29 132.5 127 48.8
Sp1g14740 Schrenkiella parvula HOM05D006956 ORTHO05D008824 3.4e-29 132.5 190 36.8
SEGI_37897 Sequoiadendron giganteum HOM05D006956 ORTHO05D008824 7.6e-29 131.3 123 47.2
Sc08g0007560 Simmondsia chinensis HOM05D006956 ORTHO05D008824 1.1e-27 127.5 152 40.1
Lsat_1_v5_gn_6_63040 Lactuca sativa HOM05D006956 ORTHO05D008824 1.9e-24 116.7 171 39.2
Prupe.4G141800 Prunus persica HOM05D006956 ORTHO05D008824 1.1e-22 110.9 123 41.5
QL04p076191 Quercus lobata HOM05D006956 ORTHO05D008824 9.9e-21 104.4 123 39.8
QL93p0133_0021 Quercus lobata HOM05D006956 ORTHO05D008824 9.9e-21 104.4 123 39.8
FAN25G3578 Fragaria x ananassa HOM05D006956 ORTHO05D008824 6.4e-20 101.7 124 39.5
RcHm_v2.0_Chr5g0026311 Rosa chinensis HOM05D006956 ORTHO05D008824 1.9e-19 100.1 186 32.3
MD17G1180100 Malus domestica HOM05D006956 ORTHO05D008824 1.0e-17 94.4 124 37.9
Actinidia35432 Actinidia chinensis HOM05D006956 ORTHO05D008824 2.8e-15 86.3 133 35.3
Cre13.g575333 Chlamydomonas reinhardtii HOM05D006956 ORTHO05D008824 5.3e-14 82.0 193 31.1
Prupe.4G139100 Prunus persica HOM05D006956 ORTHO05D008824 1.2e-13 80.9 164 29.3
ATR0753G159 Amborella trichopoda HOM05D006956 ORTHO05D008824 3.5e-10 69.3 73 45.2
vmacro09782 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 3.5e-10 69.3 61 50.8
Potri.011G142501 Populus trichocarpa HOM05D006956 ORTHO05D008824 6.1e-10 68.6 80 43.8
Lju41A37T48 Lonicera japonica HOM05D006956 ORTHO05D008824 1.3e-09 67.4 74 41.9
FAN16G1261 Fragaria x ananassa HOM05D006956 ORTHO05D008824 8.7e-09 64.7 62 46.8
MBI18_g44288_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 2.5e-08 63.2 60 46.7
vmacro22747 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 1.4e-06 57.4 168 26.2
AagrBONN_evm.TU.Sc2ySwM_362.2804 Anthoceros agrestis HOM05D006956 ORTHO05D008824 1.8e-06 57.0 69 42.0
Sed0023640 Sechium edule HOM05D004675 ORTHO05D005631 6.9e-06 55.1 170 22.9


User provided reference genes

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