Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO340G0100 Selaginella moellendorffii HOM05D006302 ORTHO05D007960 0.0e+00 2055.8 1079 100.0
AagrBONN_evm.TU.Sc2ySwM_362.1719 Anthoceros agrestis HOM05D006302 ORTHO05D007960 4.5e-235 818.9 1126 42.9
Mapoly0172s0015 Marchantia polymorpha HOM05D006302 ORTHO05D007960 2.5e-233 813.1 971 46.8
Pp3c9_1610 Physcomitrium patens HOM05D006302 ORTHO05D007960 1.9e-204 717.2 1165 39.7
Pp3c9_1614 Physcomitrium patens HOM05D006302 ORTHO05D007960 1.1e-196 691.4 1150 39.0
TAR629G0371 Trochodendron aralioides HOM05D006302 ORTHO05D007960 3.5e-195 686.4 1031 38.8
SEGI_33145 Sequoiadendron giganteum HOM05D006302 ORTHO05D007960 3.0e-194 683.3 1059 39.0
ClCG01G014910 Citrullus lanatus HOM05D006302 ORTHO05D007960 4.3e-193 679.5 1037 38.4
CsaV3_1G007420 Cucumis sativus L. HOM05D006302 ORTHO05D007960 4.3e-193 679.5 1037 38.1
Sed0020457 Sechium edule HOM05D006302 ORTHO05D007960 1.2e-192 677.9 1141 39.1
MSTRG.23195 Avicennia marina HOM05D006302 ORTHO05D007960 1.1e-188 664.8 1026 38.0
Ca_23670_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 1.2e-187 661.4 1139 37.4
Eucgr.H00592 Eucalyptus grandis HOM05D006302 ORTHO05D007960 1.6e-187 661.0 1139 38.4
ATR0598G116 Amborella trichopoda HOM05D006302 ORTHO05D007960 2.1e-187 660.6 1016 38.5
Potri.015G033300 Populus trichocarpa HOM05D006302 ORTHO05D007960 2.7e-187 660.2 1029 37.9
CDE07G1110 Ceratophyllum demersum HOM05D006302 ORTHO05D007960 1.0e-186 658.3 1006 38.3
PSO063G0294 Papaver somniferum HOM05D006302 ORTHO05D007960 1.7e-186 657.5 1021 37.5
GSVIVG01012939001 Vitis vinifera HOM05D006302 ORTHO05D007960 6.6e-186 655.6 1045 37.1
TPR.G28992 Trifolium pratense HOM05D006302 ORTHO05D007960 1.1e-185 654.8 1136 37.4
Psat1g124600 Pisum sativum HOM05D006302 ORTHO05D007960 3.6e-184 649.8 1031 37.5
Carub.0003s1747 Capsella rubella HOM05D006302 ORTHO05D007960 6.2e-184 649.0 1017 38.0
Glyma.16G219200 Glycine max HOM05D006302 ORTHO05D007960 1.4e-183 647.9 1134 37.6
Lalb_Chr14g0370421 Lupinus albus HOM05D006302 ORTHO05D007960 1.2e-182 644.8 1120 36.1
TWI81G1078 Tripterygium wilfordii HOM05D006302 ORTHO05D007960 2.6e-182 643.7 1141 36.0
FAN13G0246 Fragaria x ananassa HOM05D006302 ORTHO05D007960 4.9e-181 639.4 1044 36.6
SalBow5G5149 Salvia bowleyana HOM05D006302 ORTHO05D007960 4.9e-181 639.4 1011 37.1
Gohir.A03G090800 Gossypium hirsutum HOM05D006302 ORTHO05D007960 6.4e-181 639.0 1017 36.8
Gorai.005G134900 Gossypium raimondii HOM05D006302 ORTHO05D007960 6.4e-181 639.0 1017 36.9
Gohir.D02G118900 Gossypium hirsutum HOM05D006302 ORTHO05D007960 8.4e-181 638.6 1017 36.8
VMungo0464G0980 Vigna mungo HOM05D006302 ORTHO05D007960 8.4e-181 638.6 1131 37.0
Dinv19314 Davidia involucrata HOM05D006302 ORTHO05D007960 1.1e-180 638.3 1038 37.0
Manes.06G000900 Manihot esculenta HOM05D006302 ORTHO05D007960 1.1e-180 638.3 1014 38.0
Thecc.03G067700 Theobroma cacao HOM05D006302 ORTHO05D007960 1.1e-180 638.3 1017 37.5
Cc04_g09070 Coffea canephora HOM05D006302 ORTHO05D007960 1.4e-180 637.9 1035 36.1
Medtr4g016590 Medicago truncatula HOM05D006302 ORTHO05D007960 2.4e-180 637.1 1119 37.5
CiPaw.15G150000 Carya illinoinensis HOM05D006302 ORTHO05D007960 4.2e-180 636.3 1020 36.9
Lj2g0026336 Lotus japonicus HOM05D006302 ORTHO05D007960 1.6e-179 634.4 1030 36.3
RcHm_v2.0_Chr7g0177661 Rosa chinensis HOM05D006302 ORTHO05D007960 2.7e-179 633.6 1039 36.6
C05p48650 Brassica napus HOM05D006302 ORTHO05D007960 3.5e-179 633.3 1011 37.5
BolC5t33600H Brassica oleracea HOM05D006302 ORTHO05D007960 3.5e-179 633.3 1011 37.5
Zm00001eb256430 Zea mays HOM05D006302 ORTHO05D007960 3.5e-179 633.3 1032 37.0
FAN08G1906 Fragaria x ananassa HOM05D006302 ORTHO05D007960 7.8e-179 632.1 1042 36.9
PGR083G1118 Punica granatum HOM05D006302 ORTHO05D007960 1.0e-178 631.7 1134 36.9
Lsat_1_v5_gn_2_15380 Lactuca sativa HOM05D006302 ORTHO05D007960 5.1e-178 629.4 1026 37.3
EL10Ac8g19491 Beta vulgaris HOM05D006302 ORTHO05D007960 1.1e-177 628.2 1027 37.3
FAN04G1871 Fragaria x ananassa HOM05D006302 ORTHO05D007960 1.9e-177 627.5 1023 37.0
Sopen03g028860 Solanum pennellii HOM05D006302 ORTHO05D007960 1.9e-177 627.5 1037 36.6
CAN.G637.21 Capsicum annuum HOM05D006302 ORTHO05D007960 3.3e-177 626.7 1140 36.9
Sp3g15860 Schrenkiella parvula HOM05D006302 ORTHO05D007960 3.3e-177 626.7 1132 35.1
HanXRQChr01g0002621 Helianthus annuus HOM05D006302 ORTHO05D007960 6.2e-176 622.5 1019 37.7
MELO3C002158.2 Cucumis melo HOM05D006302 ORTHO05D007960 3.1e-175 620.2 986 37.1
Thhalv10019937m.g Eutrema salsugineum HOM05D006302 ORTHO05D007960 6.9e-175 619.0 1142 35.8
Solyc03g098160.3 Solanum lycopersicum HOM05D006302 ORTHO05D007960 6.9e-175 619.0 1037 36.5
Aa31LG8G4630 Aethionema arabicum HOM05D006302 ORTHO05D007960 9.0e-175 618.6 1160 35.4
MD14G1242200 Malus domestica HOM05D006302 ORTHO05D007960 9.0e-175 618.6 1035 36.5
Nitab4.5_0005200g0040 Nicotiana tabacum HOM05D006302 ORTHO05D007960 7.6e-174 615.5 1033 36.4
Sabra15G0027400 Salix brachista HOM05D006302 ORTHO05D007960 7.6e-174 615.5 1221 35.1
FvH4_5g17940 Fragaria vesca HOM05D006302 ORTHO05D007960 9.9e-174 615.1 1046 36.1
FAN18G4444 Fragaria x ananassa HOM05D006302 ORTHO05D007960 3.8e-173 613.2 1046 36.0
ECA238G1211 Erigeron canadensis HOM05D006302 ORTHO05D007960 6.4e-173 612.5 1031 37.6
Prupe.5G239800 Prunus persica HOM05D006302 ORTHO05D007960 6.4e-173 612.5 1031 36.7
Ciclev10018592m.g Citrus clementina HOM05D006302 ORTHO05D007960 7.1e-172 609.0 1014 36.3
Rhsim09G0028600 Rhododendron simsii HOM05D006302 ORTHO05D007960 1.2e-171 608.2 1035 35.3
arahy.Tifrunner.gnm1.ann1.YU9TRY Arachis hypogaea HOM05D006302 ORTHO05D007960 2.1e-171 607.4 1068 35.4
DCAR_010206 Daucus carota HOM05D006302 ORTHO05D007960 3.5e-171 606.7 1034 36.0
SGA_v2.0_scaffold90G27777 Striga asiatica HOM05D006302 ORTHO05D007960 4.6e-171 606.3 1058 36.1
A05p32110 Brassica napus HOM05D006302 ORTHO05D007960 1.0e-170 605.1 995 36.4
Phvul.004G145200 Phaseolus vulgaris HOM05D006302 ORTHO05D007960 1.3e-170 604.7 1136 35.9
AL3G30880 Arabidopsis lyrata HOM05D006302 ORTHO05D007960 1.7e-170 604.4 1124 35.7
Actinidia34644 Actinidia chinensis HOM05D006302 ORTHO05D007960 3.0e-170 603.6 1014 35.8
Os02g0772500 Oryza sativa ssp. japonica HOM05D006302 ORTHO05D007960 3.0e-170 603.6 1030 36.1
CSS0040809 Camellia sinensis var. sinensis HOM05D006302 ORTHO05D007960 2.5e-169 600.5 1027 36.0
THA.LOC104821822 Tarenaya hassleriana HOM05D006302 ORTHO05D007960 1.6e-168 597.8 1126 34.1
AT3G17740 Arabidopsis thaliana HOM05D006302 ORTHO05D007960 2.0e-166 590.9 1133 34.2
BcaC05g28760 Brassica carinata HOM05D006302 ORTHO05D007960 4.5e-166 589.7 996 35.9
CSS0030577 Camellia sinensis var. sinensis HOM05D006302 ORTHO05D007960 2.4e-164 583.9 1025 35.6
Peaxi162Scf00171g00631 Petunia axillaris HOM05D006302 ORTHO05D007960 3.2e-164 583.6 967 36.5
Atru.chr9.205 Acer truncatum HOM05D006302 ORTHO05D007960 4.2e-164 583.2 1020 35.4
Nitab4.5_0001180g0010 Nicotiana tabacum HOM05D006302 ORTHO05D007960 9.3e-164 582.0 1003 36.4
arahy.Tifrunner.gnm1.ann1.2W4JQ8 Arachis hypogaea HOM05D006302 ORTHO05D007960 1.6e-163 581.3 1049 35.5
Oeu060652.1 Olea europaea HOM05D006302 ORTHO05D007960 3.7e-160 570.1 1013 35.8
BraA05t22040Z Brassica rapa HOM05D006302 ORTHO05D007960 8.1e-160 568.9 997 35.9
vmacro22676 Vaccinium macrocarpon HOM05D006302 ORTHO05D007960 5.3e-159 566.2 1197 33.7
SalBow5G5312 Salvia bowleyana HOM05D006302 ORTHO05D007960 1.4e-156 558.1 977 35.2
Nn4g24592 Nelumbo nucifera HOM05D006302 ORTHO05D007960 1.5e-153 548.1 961 35.8
CBR_g4862 Chara braunii HOM05D006302 ORTHO05D007960 4.5e-150 536.6 1223 30.9
Haze_18958 Corylus avellana HOM05D006302 ORTHO05D007960 4.5e-150 536.6 1313 32.7
Migut.O00235 Erythranthe guttata HOM05D006302 ORTHO05D007960 4.5e-150 536.6 930 35.2
Lj9C414G14 Lonicera japonica HOM05D006302 ORTHO05D007960 5.0e-149 533.1 950 34.7
Duzib084G0934 Durio zibethinus HOM05D006302 ORTHO05D007960 2.5e-145 520.8 1017 33.4
SHI19119 Sapria himalayana HOM05D006302 ORTHO05D007960 6.3e-136 489.6 1095 31.7
AUR62034018 Chenopodium quinoa HOM05D006302 ORTHO05D007960 1.2e-134 485.3 811 37.0
unitig_22.g5442 Utricularia gibba HOM05D006302 ORTHO05D007960 5.3e-127 459.9 803 34.1
Sc10g0008940 Simmondsia chinensis HOM05D006302 ORTHO05D007960 2.6e-126 457.6 712 37.4
CARHR093080 Cardamine hirsuta HOM05D006302 ORTHO05D007960 2.0e-121 441.4 723 36.7
QL10p033145 Quercus lobata HOM05D006302 ORTHO05D007960 4.8e-120 436.8 1514 24.9
HPP92_002770 Vanilla planifolia HOM05D006302 ORTHO05D007960 4.2e-116 423.7 918 32.6
Ca_26696_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 1.3e-109 402.1 800 35.1
Ca_05032_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 2.3e-101 374.8 658 35.3
Ca_22760_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 2.3e-101 374.8 658 35.4
Glyma.09G169600 Glycine max HOM05D006302 ORTHO05D007960 1.2e-97 362.5 621 35.6
AT3G17712 Arabidopsis thaliana HOM05D006302 ORTHO05D007960 5.4e-95 353.6 752 32.2
Cpa.g.sc7.123 Carica papaya HOM05D006302 ORTHO05D007960 9.5e-92 342.8 483 39.3
COL.COLO4_09239 Corchorus olitorius HOM05D006302 ORTHO05D007960 2.6e-89 334.7 450 40.9
C05p48600 Brassica napus HOM05D006302 ORTHO05D007960 1.9e-60 238.8 428 34.6
Sc10g0008950 Simmondsia chinensis HOM05D006302 ORTHO05D007960 6.0e-46 190.7 309 37.5
Ah.14g085900 Amaranthus hybridus HOM05D006302 ORTHO05D007960 8.4e-32 143.7 160 48.1
Cre13.g589650 Chlamydomonas reinhardtii HOM05D006302 ORTHO05D007960 1.3e-24 119.8 277 28.5
Lsat_1_v5_gn_0_6420 Lactuca sativa HOM05D002112 ORTHO05D007960 1.3e-16 93.2 270 27.8
Medtr6g072640 Medicago truncatula HOM05D006302 ORTHO05D007960 4.7e-06 58.2 68 48.5


User provided reference genes

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