Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO340G0097 Selaginella moellendorffii HOM05D004356 ORTHO05D005542 2.4e-212 741.9 366 100.0
Mapoly0044s0034 Marchantia polymorpha HOM05D004356 ORTHO05D005542 1.1e-145 520.4 346 71.7
AagrBONN_evm.TU.Sc2ySwM_344.5470 Anthoceros agrestis HOM05D004356 ORTHO05D005542 1.1e-143 513.8 337 72.7
Pp3c23_9790 Physcomitrium patens HOM05D004356 ORTHO05D005542 1.4e-140 503.4 328 71.0
SEGI_03509 Sequoiadendron giganteum HOM05D004356 ORTHO05D005542 3.9e-138 495.4 341 69.2
COL.COLO4_11966 Corchorus olitorius HOM05D004356 ORTHO05D005542 3.3e-137 492.3 328 70.1
CSS0046210 Camellia sinensis var. sinensis HOM05D004356 ORTHO05D005542 4.3e-137 491.9 328 70.7
ECA247G0627 Erigeron canadensis HOM05D004356 ORTHO05D005542 4.3e-137 491.9 334 69.2
TWI56G1415 Tripterygium wilfordii HOM05D004356 ORTHO05D005542 1.2e-136 490.3 336 68.5
Nitab4.5_0004523g0040 Nicotiana tabacum HOM05D004356 ORTHO05D005542 2.1e-136 489.6 328 69.8
Solyc01g081300.4 Solanum lycopersicum HOM05D004356 ORTHO05D005542 2.1e-136 489.6 328 69.5
THA.LOC104816870 Tarenaya hassleriana HOM05D004356 ORTHO05D005542 2.1e-136 489.6 335 67.2
CANSAT21G1617 Cannabis sativa HOM05D004356 ORTHO05D005542 2.8e-136 489.2 334 68.9
FAN18G3440 Fragaria x ananassa HOM05D004356 ORTHO05D005542 2.8e-136 489.2 334 69.8
Sopen01g032880 Solanum pennellii HOM05D004356 ORTHO05D005542 3.6e-136 488.8 328 69.8
Duzib093G1902 Durio zibethinus HOM05D004356 ORTHO05D005542 6.2e-136 488.0 328 69.2
Lsat_1_v5_gn_1_2520 Lactuca sativa HOM05D004356 ORTHO05D005542 8.1e-136 487.6 334 68.0
FAN04G0906 Fragaria x ananassa HOM05D004356 ORTHO05D005542 3.1e-135 485.7 334 69.5
Oeu025262.1 Olea europaea HOM05D004356 ORTHO05D005542 3.1e-135 485.7 328 68.9
PGSC0003DMG400001802 Solanum tuberosum HOM05D004356 ORTHO05D005542 4.0e-135 485.3 328 69.2
Cc10_g15470 Coffea canephora HOM05D004356 ORTHO05D005542 5.2e-135 485.0 334 67.4
GSVIVG01009120001 Vitis vinifera HOM05D004356 ORTHO05D005542 5.2e-135 485.0 334 68.3
PSO675G0521 Papaver somniferum HOM05D004356 ORTHO05D005542 8.9e-135 484.2 328 69.2
FvH4_5g36000 Fragaria vesca HOM05D004356 ORTHO05D005542 1.2e-134 483.8 334 69.2
Nitab4.5_0001788g0020 Nicotiana tabacum HOM05D004356 ORTHO05D005542 1.5e-134 483.4 328 69.2
RcHm_v2.0_Chr1g0327751 Rosa chinensis HOM05D004356 ORTHO05D005542 1.5e-134 483.4 334 68.9
Aa31LG8G7830 Aethionema arabicum HOM05D004356 ORTHO05D005542 2.0e-134 483.0 342 66.4
Dinv42649 Davidia involucrata HOM05D004356 ORTHO05D005542 2.0e-134 483.0 334 68.6
PSO675G5075 Papaver somniferum HOM05D004356 ORTHO05D005542 2.0e-134 483.0 328 69.2
Sed0016629 Sechium edule HOM05D004356 ORTHO05D005542 2.6e-134 482.6 365 66.3
CDE04G0095 Ceratophyllum demersum HOM05D004356 ORTHO05D005542 4.4e-134 481.9 328 69.8
Cc07_g18320 Coffea canephora HOM05D004356 ORTHO05D005542 4.4e-134 481.9 334 66.8
QL09p016893 Quercus lobata HOM05D004356 ORTHO05D005542 4.4e-134 481.9 334 67.1
SalBow8G3481 Salvia bowleyana HOM05D004356 ORTHO05D005542 4.4e-134 481.9 326 69.0
AT3G21110 Arabidopsis thaliana HOM05D004356 ORTHO05D005542 5.8e-134 481.5 336 66.7
A01p33740 Brassica napus HOM05D004356 ORTHO05D005542 5.8e-134 481.5 336 66.7
A03p42020 Brassica napus HOM05D004356 ORTHO05D005542 5.8e-134 481.5 335 65.7
Carub.0003s2101 Capsella rubella HOM05D004356 ORTHO05D005542 5.8e-134 481.5 336 66.7
CsaV3_2G030020 Cucumis sativus L. HOM05D004356 ORTHO05D005542 5.8e-134 481.5 328 68.9
Lj1g0019049 Lotus japonicus HOM05D004356 ORTHO05D005542 5.8e-134 481.5 335 69.3
Os09g0467100 Oryza sativa ssp. japonica HOM05D004356 ORTHO05D005542 5.8e-134 481.5 328 70.1
TAR381G1323 Trochodendron aralioides HOM05D004356 ORTHO05D005542 5.8e-134 481.5 334 68.0
Cc10_g15440 Coffea canephora HOM05D004356 ORTHO05D005542 7.6e-134 481.1 334 66.8
MD15G1379800 Malus domestica HOM05D004356 ORTHO05D005542 7.6e-134 481.1 334 68.6
PSO017G1942 Papaver somniferum HOM05D004356 ORTHO05D005542 7.6e-134 481.1 328 69.2
MELO3C011060.2 Cucumis melo HOM05D004356 ORTHO05D005542 1.3e-133 480.3 328 68.6
Zm00001eb284720 Zea mays HOM05D004356 ORTHO05D005542 1.3e-133 480.3 364 64.6
Actinidia33114 Actinidia chinensis HOM05D004356 ORTHO05D005542 1.7e-133 479.9 334 68.0
Thhalv10020825m.g Eutrema salsugineum HOM05D004356 ORTHO05D005542 1.7e-133 479.9 336 66.1
Gohir.A05G222100 Gossypium hirsutum HOM05D004356 ORTHO05D005542 2.2e-133 479.6 328 67.7
Hund16880 Selenicereus undatus HOM05D004356 ORTHO05D005542 2.2e-133 479.6 326 69.0
vmacro04684 Vaccinium macrocarpon HOM05D004356 ORTHO05D005542 2.2e-133 479.6 357 64.4
BraA01t03487Z Brassica rapa HOM05D004356 ORTHO05D005542 2.9e-133 479.2 338 66.0
Glyma.14G178900 Glycine max HOM05D004356 ORTHO05D005542 2.9e-133 479.2 343 67.3
RcHm_v2.0_Chr7g0237731 Rosa chinensis HOM05D004356 ORTHO05D005542 3.8e-133 478.8 334 68.3
CAN.G992.8 Capsicum annuum HOM05D004356 ORTHO05D005542 4.9e-133 478.4 328 68.6
HanXRQChr02g0040341 Helianthus annuus HOM05D004356 ORTHO05D005542 4.9e-133 478.4 334 67.1
Glyma.02G211300 Glycine max HOM05D004356 ORTHO05D005542 6.4e-133 478.0 342 67.8
MD00G1136500 Malus domestica HOM05D004356 ORTHO05D005542 6.4e-133 478.0 328 68.9
Carub.0003s2106 Capsella rubella HOM05D004356 ORTHO05D005542 8.4e-133 477.6 336 66.1
BraA03t13356Z Brassica rapa HOM05D004356 ORTHO05D005542 1.1e-132 477.2 338 65.7
CiPaw.16G056200 Carya illinoinensis HOM05D004356 ORTHO05D005542 1.1e-132 477.2 328 67.7
HPP92_011797 Vanilla planifolia HOM05D004356 ORTHO05D005542 1.1e-132 477.2 351 64.7
ATR0022G038 Amborella trichopoda HOM05D004356 ORTHO05D005542 1.4e-132 476.9 340 66.5
arahy.Tifrunner.gnm1.ann1.VLAW7V Arachis hypogaea HOM05D004356 ORTHO05D005542 1.4e-132 476.9 335 67.8
CARHR096940 Cardamine hirsuta HOM05D004356 ORTHO05D005542 1.9e-132 476.5 336 65.8
AL3G35050 Arabidopsis lyrata HOM05D004356 ORTHO05D005542 2.4e-132 476.1 336 65.8
AUR62027839 Chenopodium quinoa HOM05D004356 ORTHO05D005542 2.4e-132 476.1 326 68.4
BolC3t17429H Brassica oleracea HOM05D004356 ORTHO05D005542 3.2e-132 475.7 335 64.8
Migut.M02007 Erythranthe guttata HOM05D004356 ORTHO05D005542 3.2e-132 475.7 326 68.1
arahy.Tifrunner.gnm1.ann1.QY7301 Arachis hypogaea HOM05D004356 ORTHO05D005542 4.2e-132 475.3 335 67.8
Ca_19032_v3 Cicer arietinum L. HOM05D004356 ORTHO05D005542 4.2e-132 475.3 326 68.1
arahy.Tifrunner.gnm1.ann1.JC6ZCB Arachis hypogaea HOM05D004356 ORTHO05D005542 5.4e-132 474.9 335 67.5
FAN08G0112 Fragaria x ananassa HOM05D004356 ORTHO05D005542 7.1e-132 474.6 361 64.5
Manes.18G062300 Manihot esculenta HOM05D004356 ORTHO05D005542 7.1e-132 474.6 309 70.9
Rhsim07G0209000 Rhododendron simsii HOM05D004356 ORTHO05D005542 7.1e-132 474.6 357 64.1
Ah.05g170540 Amaranthus hybridus HOM05D004356 ORTHO05D005542 1.2e-131 473.8 363 63.6
Phvul.008G178500 Phaseolus vulgaris HOM05D004356 ORTHO05D005542 1.2e-131 473.8 338 66.6
SGA_v2.0_scaffold175G39331 Striga asiatica HOM05D004356 ORTHO05D005542 1.2e-131 473.8 334 67.1
BcaB04g19136 Brassica carinata HOM05D004356 ORTHO05D005542 2.1e-131 473.0 336 65.5
VMungo0647G1889 Vigna mungo HOM05D004356 ORTHO05D005542 2.1e-131 473.0 341 66.0
Ciclev10001304m.g Citrus clementina HOM05D004356 ORTHO05D005542 4.6e-131 471.9 332 66.9
PGR102G1623 Punica granatum HOM05D004356 ORTHO05D005542 6.0e-131 471.5 328 68.6
Atru.chr13.1064 Acer truncatum HOM05D004356 ORTHO05D005542 7.8e-131 471.1 328 67.1
Atru.chr13.1070 Acer truncatum HOM05D004356 ORTHO05D005542 7.8e-131 471.1 328 67.1
CSS0005507 Camellia sinensis var. sinensis HOM05D004356 ORTHO05D005542 7.8e-131 471.1 329 68.7
Gorai.009G232200 Gossypium raimondii HOM05D004356 ORTHO05D005542 1.0e-130 470.7 328 66.5
Peaxi162Scf00592g00454 Petunia axillaris HOM05D004356 ORTHO05D005542 1.0e-130 470.7 354 63.8
TPR.G16206 Trifolium pratense HOM05D004356 ORTHO05D005542 1.0e-130 470.7 376 61.7
Gohir.D05G224800 Gossypium hirsutum HOM05D004356 ORTHO05D005542 1.3e-130 470.3 328 66.5
Aqoxy3G00172 Aquilegia oxysepala HOM05D004356 ORTHO05D005542 1.7e-130 469.9 334 65.9
EL10Ac9g21432 Beta vulgaris HOM05D000128 ORTHO05D005542 2.3e-130 469.5 340 67.1
MSTRG.16368 Avicennia marina HOM05D004356 ORTHO05D005542 3.9e-130 468.8 325 66.2
Lalb_Chr10g0102631 Lupinus albus HOM05D004356 ORTHO05D005542 5.1e-130 468.4 314 70.1
TPR.G30120 Trifolium pratense HOM05D004356 ORTHO05D005542 5.1e-130 468.4 374 62.0
Haze_22357 Corylus avellana HOM05D004356 ORTHO05D005542 6.6e-130 468.0 365 62.7
Lj1g0006758 Lotus japonicus HOM05D004356 ORTHO05D005542 1.9e-129 466.5 330 68.5
Psat2g068800 Pisum sativum HOM05D004356 ORTHO05D005542 2.5e-129 466.1 337 65.6
Dinv44826 Davidia involucrata HOM05D004356 ORTHO05D005542 1.6e-128 463.4 301 71.4
unitig_37.g12048 Utricularia gibba HOM05D004356 ORTHO05D005542 1.6e-128 463.4 353 63.7
Medtr5g065270 Medicago truncatula HOM05D004356 ORTHO05D005542 2.1e-128 463.0 337 65.9
BcaB04g20611 Brassica carinata HOM05D004356 ORTHO05D005542 4.8e-128 461.8 336 64.9
BcaC01g03528 Brassica carinata HOM05D004356 ORTHO05D004900 4.8e-128 461.8 313 66.8
Eucgr.F00397 Eucalyptus grandis HOM05D004356 ORTHO05D005542 1.4e-127 460.3 346 64.5
Aqoxy1G00182 Aquilegia oxysepala HOM05D004356 ORTHO05D005542 1.8e-127 459.9 334 65.6
Potri.017G051500 Populus trichocarpa HOM05D004356 ORTHO05D005542 6.9e-127 458.0 299 71.6
AUR62018997 Chenopodium quinoa HOM05D004356 ORTHO05D005542 2.9e-125 452.6 299 69.9
C01p43120 Brassica napus HOM05D004356 ORTHO05D005542 4.9e-125 451.8 300 68.0
C03p51440 Brassica napus HOM05D004356 ORTHO05D005542 4.9e-125 451.8 340 62.4
BolC1t04259H Brassica oleracea HOM05D004356 ORTHO05D005542 4.9e-125 451.8 300 68.0
Carub.0043s0008 Capsella rubella HOM05D004356 ORTHO05D005542 4.9e-125 451.8 293 68.6
Thecc.08G065800 Theobroma cacao HOM05D004356 ORTHO05D005542 6.4e-125 451.4 294 71.1
Duzib106G0787 Durio zibethinus HOM05D004356 ORTHO05D005542 1.2e-123 447.2 334 63.8
CBR_g27760 Chara braunii HOM05D004356 ORTHO05D005542 2.3e-122 443.0 327 65.7
Sabra17G0038400 Salix brachista HOM05D004356 ORTHO05D005542 8.7e-122 441.0 340 63.8
Sabra17G0043000 Salix brachista HOM05D004356 ORTHO05D005542 8.7e-122 441.0 340 63.8
Sabra17G0037700 Salix brachista HOM05D004356 ORTHO05D005542 5.6e-121 438.3 340 63.5
Sp3g19060 Schrenkiella parvula HOM05D004356 ORTHO05D005542 1.1e-119 434.1 336 61.9
arahy.Tifrunner.gnm1.ann1.3Z7WCZ Arachis hypogaea HOM05D004356 ORTHO05D005542 4.0e-119 432.2 335 63.3
Cfa013712 Carpinus fangiana HOM05D004356 ORTHO05D005542 6.9e-119 431.4 328 64.0
Prupe.1G526100 Prunus persica HOM05D004356 ORTHO05D005542 2.0e-118 429.9 281 71.9
arahy.Tifrunner.gnm1.ann1.1YQ32R Arachis hypogaea HOM05D004356 ORTHO05D005542 1.3e-114 417.2 360 58.3
Carub.0043s0006 Capsella rubella HOM05D004356 ORTHO05D005542 1.3e-114 417.2 336 59.8
arahy.Tifrunner.gnm1.ann1.L8UQBM Arachis hypogaea HOM05D004356 ORTHO05D005542 6.2e-112 408.3 274 70.1
Cre03.g202113 Chlamydomonas reinhardtii HOM05D004356 ORTHO05D005542 2.5e-108 396.4 337 57.9
Carub.0043s0010 Capsella rubella HOM05D004356 ORTHO05D005542 3.2e-108 396.0 322 58.7
Sc23g0000510 Simmondsia chinensis HOM05D004356 ORTHO05D005542 1.1e-105 387.5 265 69.1
PRCOL_00002575 Prasinoderma coloniale HOM05D004356 ORTHO05D005542 1.4e-103 380.6 306 61.4
MCO12G379 Micromonas commoda HOM05D004356 ORTHO05D005542 1.3e-101 374.0 363 54.0
SHI20358 Sapria himalayana HOM05D004356 ORTHO05D005542 1.0e-98 364.4 325 54.5
Lj4C732G13 Lonicera japonica HOM05D004356 ORTHO05D005542 8.2e-96 354.8 366 52.2
Cpa.g.sc198.38 Carica papaya HOM05D004356 ORTHO05D005542 3.7e-88 329.3 259 61.4
Gohir.A05G222001 Gossypium hirsutum HOM05D004356 ORTHO05D005542 5.0e-85 318.9 260 58.8
CiPaw.16G030800 Carya illinoinensis HOM05D004356 ORTHO05D005542 7.0e-79 298.5 260 56.5
Actinidia29604 Actinidia chinensis HOM05D004356 ORTHO05D005542 3.7e-72 276.2 187 68.4
arahy.Tifrunner.gnm1.ann1.PGQR8U Arachis hypogaea HOM05D004356 ORTHO05D005542 7.0e-71 271.9 300 49.0
Nn1g08498 Nelumbo nucifera HOM05D004356 ORTHO05D005542 5.2e-66 255.8 179 65.9
RcHm_v2.0_Chr3g0491851 Rosa chinensis HOM05D004356 ORTHO05D005542 5.4e-63 245.7 275 49.5
ClCG00G002050 Citrullus lanatus HOM05D004356 ORTHO05D005542 1.6e-62 244.2 213 58.7
ClCG08G011430 Citrullus lanatus HOM05D004356 ORTHO05D005542 1.1e-60 238.0 156 73.1
Carub.0516s0001 Capsella rubella HOM05D004356 ORTHO05D005542 4.7e-59 232.6 141 73.0
Nn1g08495 Nelumbo nucifera HOM05D004356 ORTHO05D005542 1.0e-58 231.5 155 70.3
DCAR_012871 Daucus carota HOM05D004356 ORTHO05D005542 4.4e-49 199.5 294 40.5
arahy.Tifrunner.gnm1.ann1.X0GHYT Arachis hypogaea HOM05D004356 ORTHO05D005542 2.7e-46 190.3 239 45.2
arahy.Tifrunner.gnm1.ann1.HK5GW2 Arachis hypogaea HOM05D004356 ORTHO05D005542 1.3e-40 171.4 206 48.1
arahy.Tifrunner.gnm1.ann1.F3AJY4 Arachis hypogaea HOM05D004356 ORTHO05D005542 1.7e-37 161.0 119 63.9
Psat0s4321g0120 Pisum sativum HOM05D004356 ORTHO05D005542 5.0e-37 159.5 116 63.8
arahy.Tifrunner.gnm1.ann1.F88CCI Arachis hypogaea HOM05D004356 ORTHO05D005542 6.2e-35 152.5 270 36.3
arahy.Tifrunner.gnm1.ann1.FASD2W Arachis hypogaea HOM05D004356 ORTHO05D005542 8.9e-34 148.7 119 60.5
arahy.Tifrunner.gnm1.ann1.MUPT6T Arachis hypogaea HOM05D004356 ORTHO05D005542 8.9e-34 148.7 119 60.5
arahy.Tifrunner.gnm1.ann1.D1TUAT Arachis hypogaea HOM05D004356 ORTHO05D005542 2.0e-33 147.5 127 61.4
arahy.Tifrunner.gnm1.ann1.6VP8YS Arachis hypogaea HOM05D004356 ORTHO05D005542 1.1e-31 141.7 122 60.7
arahy.Tifrunner.gnm1.ann1.H4UIY2 Arachis hypogaea HOM05D004356 ORTHO05D005542 1.6e-27 127.9 159 47.2
arahy.Tifrunner.gnm1.ann1.JXGW17 Arachis hypogaea HOM05D004356 ORTHO05D005542 1.6e-27 127.9 159 47.2
EL10As8g23848 Beta vulgaris HOM05D004356 ORTHO05D090264 1.6e-27 127.9 235 37.4
Cfa024383 Carpinus fangiana HOM05D004356 ORTHO05D124745 5.6e-20 102.8 170 37.6
Zm00001eb297900 Zea mays HOM05D004356 ORTHO05D005542 2.6e-17 94.0 49 79.6
Zm00001eb297960 Zea mays HOM05D004356 ORTHO05D444542 2.6e-17 94.0 49 79.6
arahy.Tifrunner.gnm1.ann1.8IDC4C Arachis hypogaea HOM05D004356 ORTHO05D005542 1.9e-07 61.2 51 56.9


User provided reference genes

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