Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO339G0064 Selaginella moellendorffii HOM05D002209 ORTHO05D007926 2.5e-136 488.8 249 100.0
Pp3c9_17380 Physcomitrium patens HOM05D002209 ORTHO05D007926 4.2e-59 232.3 236 50.4
Phvul.002G327300 Phaseolus vulgaris HOM05D002209 ORTHO05D007926 1.3e-57 227.3 235 48.1
Mapoly0110s0002 Marchantia polymorpha HOM05D002209 ORTHO05D007926 1.8e-57 226.9 234 48.7
Lj4g0023570 Lotus japonicus HOM05D002209 ORTHO05D007926 2.3e-57 226.5 238 47.5
VMungo0251G3506 Vigna mungo HOM05D002209 ORTHO05D007926 2.3e-57 226.5 230 48.7
AagrBONN_evm.TU.Sc2ySwM_344.2039 Anthoceros agrestis HOM05D002209 ORTHO05D007926 3.0e-57 226.1 224 49.6
Glyma.05G243600 Glycine max HOM05D002209 ORTHO05D007926 1.1e-56 224.2 229 48.0
Glyma.08G051400 Glycine max HOM05D002209 ORTHO05D007926 5.6e-56 221.9 233 46.8
Medtr8g106740 Medicago truncatula HOM05D002209 ORTHO05D007926 3.7e-55 219.2 229 46.3
Lalb_Chr09g0330531 Lupinus albus HOM05D002209 ORTHO05D007926 4.8e-55 218.8 225 46.7
MELO3C002120.2 Cucumis melo HOM05D002209 ORTHO05D007926 1.8e-54 216.9 233 45.1
PSO017G1461 Papaver somniferum HOM05D002209 ORTHO05D007926 4.0e-54 215.7 230 43.5
PSO478G0876 Papaver somniferum HOM05D002209 ORTHO05D007926 4.0e-54 215.7 230 43.5
arahy.Tifrunner.gnm1.ann1.IWL1UH Arachis hypogaea HOM05D002209 ORTHO05D007926 5.3e-54 215.3 236 45.8
CsaV3_1G007020 Cucumis sativus L. HOM05D002209 ORTHO05D007926 5.3e-54 215.3 233 44.6
arahy.Tifrunner.gnm1.ann1.7LX2IS Arachis hypogaea HOM05D002209 ORTHO05D007926 1.5e-53 213.8 237 44.7
Nitab4.5_0001158g0030 Nicotiana tabacum HOM05D002209 ORTHO05D007926 1.5e-53 213.8 232 45.3
ClCG04G010780 Citrullus lanatus HOM05D002209 ORTHO05D007926 2.0e-53 213.4 233 43.8
MBI13_g00575_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D007926 2.0e-53 213.4 225 44.9
Nitab4.5_0012369g0010 Nicotiana tabacum HOM05D002209 ORTHO05D007926 2.0e-53 213.4 229 45.4
SalBow5G1692 Salvia bowleyana HOM05D002209 ORTHO05D007926 2.0e-53 213.4 225 45.8
Sed0021446 Sechium edule HOM05D002209 ORTHO05D007926 2.6e-53 213.0 233 43.8
ATR0068G069 Amborella trichopoda HOM05D002209 ORTHO05D007926 3.4e-53 212.6 238 43.7
Peaxi162Scf00683g10026 Petunia axillaris HOM05D002209 ORTHO05D007926 3.4e-53 212.6 225 45.8
TAR622G1089 Trochodendron aralioides HOM05D002209 ORTHO05D007926 3.4e-53 212.6 225 44.4
arahy.Tifrunner.gnm1.ann1.X5TZ4V Arachis hypogaea HOM05D002209 ORTHO05D007926 4.5e-53 212.2 224 46.9
CDE08G0043 Ceratophyllum demersum HOM05D002209 ORTHO05D007926 5.8e-53 211.8 225 43.1
CSS0012934 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 9.9e-53 211.1 232 44.0
CSS0018698 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 9.9e-53 211.1 232 44.0
Actinidia35109 Actinidia chinensis HOM05D002209 ORTHO05D007926 1.3e-52 210.7 230 43.9
CANSAT80G1708 Cannabis sativa HOM05D002209 ORTHO05D007926 1.7e-52 210.3 241 45.2
CANSAT80G2078 Cannabis sativa HOM05D002209 ORTHO05D007926 1.7e-52 210.3 241 45.2
Duzib160G0876 Durio zibethinus HOM05D002209 ORTHO05D007926 1.7e-52 210.3 234 44.4
Rhsim12G0139900 Rhododendron simsii HOM05D002209 ORTHO05D007926 1.7e-52 210.3 237 43.9
Actinidia18911 Actinidia chinensis HOM05D002209 ORTHO05D007926 2.2e-52 209.9 230 42.6
Aqoxy3G00431 Aquilegia oxysepala HOM05D002209 ORTHO05D007926 2.2e-52 209.9 225 43.1
Cfa019698 Carpinus fangiana HOM05D002209 ORTHO05D007926 2.9e-52 209.5 236 43.2
QL10p027511 Quercus lobata HOM05D002209 ORTHO05D007926 3.8e-52 209.1 236 44.1
Nitab4.5_0000150g0080 Nicotiana tabacum HOM05D002209 ORTHO05D007926 4.9e-52 208.8 225 45.8
Hma1.2p1_1257F.1_g270850 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 1.4e-51 207.2 230 44.8
Thecc.06G020700 Theobroma cacao HOM05D002209 ORTHO05D007926 1.4e-51 207.2 234 44.0
arahy.Tifrunner.gnm1.ann1.A2QZNW Arachis hypogaea HOM05D002209 ORTHO05D007926 1.9e-51 206.8 224 45.5
CAN.G1129.32 Capsicum annuum HOM05D002209 ORTHO05D007926 1.9e-51 206.8 230 45.7
Lalb_Chr16g0387151 Lupinus albus HOM05D002209 ORTHO05D007926 3.2e-51 206.1 208 48.1
Sc10g0009340 Simmondsia chinensis HOM05D002209 ORTHO05D007926 4.2e-51 205.7 247 42.5
Ah.11g045280 Amaranthus hybridus HOM05D002209 ORTHO05D007926 5.5e-51 205.3 238 44.1
Zm00001eb128260 Zea mays HOM05D002209 ORTHO05D007926 5.5e-51 205.3 232 42.7
Sopen00g010550 Solanum pennellii HOM05D002209 ORTHO05D007926 7.1e-51 204.9 230 44.3
PGSC0003DMG400005659 Solanum tuberosum HOM05D002209 ORTHO05D007926 9.3e-51 204.5 230 44.3
SGA_v2.0_scaffold21G09613 Striga asiatica HOM05D002209 ORTHO05D007926 9.3e-51 204.5 225 44.4
ECA240G0871 Erigeron canadensis HOM05D002209 ORTHO05D007926 1.6e-50 203.8 235 43.8
Migut.L01913 Erythranthe guttata HOM05D002209 ORTHO05D007926 1.6e-50 203.8 225 44.0
Gohir.D06G123100 Gossypium hirsutum HOM05D002209 ORTHO05D007926 2.1e-50 203.4 235 45.5
Solyc03g119010.3 Solanum lycopersicum HOM05D002209 ORTHO05D007926 2.1e-50 203.4 230 43.9
TWI81G0293 Tripterygium wilfordii HOM05D002209 ORTHO05D007926 2.1e-50 203.4 238 43.7
Atru.chr9.948 Acer truncatum HOM05D002209 ORTHO05D007926 4.6e-50 202.2 232 43.1
Gorai.010G143200 Gossypium raimondii HOM05D002209 ORTHO05D007926 4.6e-50 202.2 235 45.1
Lsat_1_v5_gn_3_114081 Lactuca sativa HOM05D002209 ORTHO05D007926 4.6e-50 202.2 230 43.0
Manes.14G168500 Manihot esculenta HOM05D002209 ORTHO05D007926 6.0e-50 201.8 234 44.4
TPR.G12761 Trifolium pratense HOM05D002209 ORTHO05D007926 7.9e-50 201.4 233 43.3
MD14G1233600 Malus domestica HOM05D002209 ORTHO05D007926 2.3e-49 199.9 247 40.9
PGR083G0394 Punica granatum HOM05D002209 ORTHO05D007926 3.0e-49 199.5 233 42.1
EL10Ac5g11521 Beta vulgaris HOM05D002209 ORTHO05D007926 5.1e-49 198.7 238 43.7
MD00G1160500 Malus domestica HOM05D002209 ORTHO05D007926 5.1e-49 198.7 238 41.6
MSTRG.22939 Avicennia marina HOM05D002209 ORTHO05D007926 6.7e-49 198.4 225 43.6
Prupe.5G229800 Prunus persica HOM05D002209 ORTHO05D007926 8.7e-49 198.0 224 42.9
AUR62033751 Chenopodium quinoa HOM05D002209 ORTHO05D007926 1.9e-48 196.8 258 41.1
HPP92_026682 Vanilla planifolia HOM05D002209 ORTHO05D007926 2.5e-48 196.4 223 41.7
CiPaw.15G139100 Carya illinoinensis HOM05D002209 ORTHO05D007926 3.3e-48 196.1 230 43.0
Ciclev10009263m.g Citrus clementina HOM05D002209 ORTHO05D007926 5.6e-48 195.3 242 42.1
Potri.015G041800 Populus trichocarpa HOM05D002209 ORTHO05D007926 5.6e-48 195.3 234 42.3
Gohir.A06G114800 Gossypium hirsutum HOM05D002209 ORTHO05D007926 7.4e-48 194.9 235 43.8
Ca_14628_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 1.6e-47 193.7 233 43.3
Sabra15G0055300 Salix brachista HOM05D002209 ORTHO05D007926 4.8e-47 192.2 234 41.9
BcaC05g28661 Brassica carinata HOM05D002209 ORTHO05D007926 6.2e-47 191.8 234 41.0
BolC5t33504H Brassica oleracea HOM05D002209 ORTHO05D007926 6.2e-47 191.8 234 41.0
Eucgr.B00853 Eucalyptus grandis HOM05D002209 ORTHO05D007926 6.2e-47 191.8 233 41.2
HanXRQChr03g0090991 Helianthus annuus HOM05D002209 ORTHO05D007926 6.2e-47 191.8 227 42.3
Nn2g14536 Nelumbo nucifera HOM05D002209 ORTHO05D007926 1.1e-46 191.0 230 40.0
BcaB04g20790 Brassica carinata HOM05D002209 ORTHO05D007926 1.8e-46 190.3 234 39.3
unitig_27.g24963 Utricularia gibba HOM05D002209 ORTHO05D007926 2.4e-46 189.9 226 42.0
C05p47920 Brassica napus HOM05D002209 ORTHO05D007926 3.1e-46 189.5 234 40.6
BraA05t21994Z Brassica rapa HOM05D002209 ORTHO05D007926 3.1e-46 189.5 234 40.6
CARHR093490 Cardamine hirsuta HOM05D002209 ORTHO05D007926 3.1e-46 189.5 234 40.6
AT3G18165 Arabidopsis thaliana HOM05D002209 ORTHO05D007926 4.0e-46 189.1 234 40.2
DCAR_011381 Daucus carota HOM05D002209 ORTHO05D007926 5.3e-46 188.7 239 41.8
CBR_g46893 Chara braunii HOM05D006221 ORTHO05D007759 6.9e-46 188.3 234 43.6
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 1.5e-45 187.2 234 41.0
A05p31590 Brassica napus HOM05D002209 ORTHO05D007926 1.5e-45 187.2 234 40.2
Sp3g16280 Schrenkiella parvula HOM05D002209 ORTHO05D007926 1.5e-45 187.2 234 40.2
THA.LOC104820370 Tarenaya hassleriana HOM05D002209 ORTHO05D007926 1.5e-45 187.2 234 41.0
AL3G31340 Arabidopsis lyrata HOM05D002209 ORTHO05D007926 2.6e-45 186.4 234 39.3
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 2.6e-45 186.4 234 38.9
BcaC09g48772 Brassica carinata HOM05D002209 ORTHO05D007926 3.4e-45 186.0 234 38.9
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 3.4e-45 186.0 234 38.9
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 4.5e-45 185.7 234 38.9
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 4.5e-45 185.7 234 38.9
Carub.0003s1789 Capsella rubella HOM05D002209 ORTHO05D007926 4.5e-45 185.7 234 39.7
Thhalv10021375m.g Eutrema salsugineum HOM05D002209 ORTHO05D007926 7.6e-45 184.9 234 38.9
GSVIVG01008385001 Vitis vinifera HOM05D002209 ORTHO05D007926 5.5e-43 178.7 197 44.7
Lj9A422G65 Lonicera japonica HOM05D002209 ORTHO05D007926 2.1e-42 176.8 185 45.9
Hund02335 Selenicereus undatus HOM05D002209 ORTHO05D007926 3.5e-42 176.0 240 43.3
Sabra15G0061600 Salix brachista HOM05D002209 ORTHO05D007926 7.9e-42 174.9 269 36.4
vmacro16426 Vaccinium macrocarpon HOM05D002209 ORTHO05D007926 5.7e-40 168.7 291 35.1
COL.COLO4_07530 Corchorus olitorius HOM05D002209 ORTHO05D007926 2.2e-39 166.8 189 43.9
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 2.0e-37 160.2 224 38.4
RcHm_v2.0_Chr7g0178821 Rosa chinensis HOM05D002209 ORTHO05D007926 4.5e-37 159.1 226 38.9
FAN08G0602 Fragaria x ananassa HOM05D002209 ORTHO05D007926 2.9e-36 156.4 226 38.9
FvH4_5g17030 Fragaria vesca HOM05D002209 ORTHO05D007926 5.0e-36 155.6 226 38.5
FAN13G0553 Fragaria x ananassa HOM05D002209 ORTHO05D007926 6.5e-36 155.2 226 38.5
Cc04_g06640 Coffea canephora HOM05D002209 ORTHO05D007926 8.5e-36 154.8 197 41.1
FAN18G2854 Fragaria x ananassa HOM05D002209 ORTHO05D007926 2.1e-34 150.2 226 37.6
HPP92_018005 Vanilla planifolia HOM05D002209 ORTHO05D007926 8.2e-31 138.3 153 41.8
AUR62029954 Chenopodium quinoa HOM05D002209 ORTHO05D007926 1.8e-30 137.1 194 40.2
Dinv13547 Davidia involucrata HOM05D002209 ORTHO05D007926 6.9e-30 135.2 230 32.6
Psat7g003920 Pisum sativum HOM05D002209 ORTHO05D007926 6.9e-30 135.2 141 46.8
Cre17.g697350 Chlamydomonas reinhardtii HOM05D002209 ORTHO05D007926 5.9e-29 132.1 228 35.5
Oeu014368.1 Olea europaea HOM05D002209 ORTHO05D007926 5.9e-29 132.1 152 41.4
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 7.7e-29 131.7 160 40.6
SEGI_33728 Sequoiadendron giganteum HOM05D002209 ORTHO05D007926 1.7e-28 130.6 139 43.9
MCO11G869 Micromonas commoda HOM05D002209 ORTHO05D007926 1.6e-26 124.0 237 34.6
Hma1.2p1_1257F.1_g270860 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 6.7e-25 118.6 134 44.0
C05p44850 Brassica napus HOM05D002209 ORTHO05D007926 1.0e-09 68.2 79 36.7
BolC5t33212H Brassica oleracea HOM05D002209 ORTHO05D007926 1.0e-09 68.2 79 36.7
AUR62029953 Chenopodium quinoa HOM05D002209 ORTHO05D007926 6.7e-09 65.5 69 43.5
Ca_29797_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 4.4e-08 62.8 41 61.0
Ca_17308_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 3.7e-07 59.7 68 42.6
Psat7g003960 Pisum sativum HOM05D002209 ORTHO05D007926 1.8e-06 57.4 68 41.2


User provided reference genes

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