Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO337G0057 Selaginella moellendorffii HOM05D000586 ORTHO05D008681 4.0e-79 298.1 162 100.0
Aqoxy5G01445 Aquilegia oxysepala HOM05D000586 ORTHO05D008681 1.4e-52 209.9 165 69.1
AagrBONN_evm.TU.Sc2ySwM_228.435 Anthoceros agrestis HOM05D000586 ORTHO05D008681 4.6e-51 204.9 146 71.2
Ciclev10029227m.g Citrus clementina HOM05D000586 ORTHO05D008681 1.5e-49 199.9 168 66.7
Gohir.D13G090500 Gossypium hirsutum HOM05D000586 ORTHO05D008681 1.9e-49 199.5 168 64.3
Gorai.001G244200 Gossypium raimondii HOM05D000586 ORTHO05D008681 1.9e-49 199.5 168 64.3
Nn6g32309 Nelumbo nucifera HOM05D000586 ORTHO05D008681 3.3e-49 198.7 167 64.1
BcaNung00666 Brassica carinata HOM05D000586 ORTHO05D008681 4.3e-49 198.4 162 64.2
BcaNung04297 Brassica carinata HOM05D000586 ORTHO05D008681 4.3e-49 198.4 162 64.2
C01p04060 Brassica napus HOM05D000586 ORTHO05D003356 5.7e-49 198.0 161 64.0
BraA01t00363Z Brassica rapa HOM05D000586 ORTHO05D008681 7.4e-49 197.6 162 63.6
QL11p046751 Quercus lobata HOM05D000586 ORTHO05D008681 7.4e-49 197.6 168 66.1
A01p03780 Brassica napus HOM05D000586 ORTHO05D003356 9.7e-49 197.2 161 63.4
PGR042G2570 Punica granatum HOM05D000586 ORTHO05D008681 9.7e-49 197.2 167 65.3
BolC1t00397H Brassica oleracea HOM05D000586 ORTHO05D003356 1.3e-48 196.8 160 64.4
CBR_g38914 Chara braunii HOM05D000586 ORTHO05D008681 1.3e-48 196.8 157 65.6
Nitab4.5_0002096g0050 Nicotiana tabacum HOM05D000586 ORTHO05D008681 1.3e-48 196.8 167 62.9
Potri.004G164200 Populus trichocarpa HOM05D000586 ORTHO05D008681 1.3e-48 196.8 167 64.1
SalBow6G4654 Salvia bowleyana HOM05D000586 ORTHO05D008681 1.3e-48 196.8 170 63.5
Sp7g32510 Schrenkiella parvula HOM05D000586 ORTHO05D008681 1.3e-48 196.8 162 64.2
AT4G34730 Arabidopsis thaliana HOM05D000586 ORTHO05D008681 1.6e-48 196.4 164 65.2
C07p60740 Brassica napus HOM05D000586 ORTHO05D001010 1.6e-48 196.4 162 63.0
BolC7t46503H Brassica oleracea HOM05D000586 ORTHO05D008681 1.6e-48 196.4 162 63.6
Glyma.06G007300 Glycine max HOM05D000586 ORTHO05D008681 2.2e-48 196.1 163 62.6
Thecc.02G073100 Theobroma cacao HOM05D000586 ORTHO05D008681 2.2e-48 196.1 168 64.3
Cpa.g.sc150.2 Carica papaya HOM05D000586 ORTHO05D008681 2.8e-48 195.7 167 65.3
Nitab4.5_0010885g0020 Nicotiana tabacum HOM05D000586 ORTHO05D008681 2.8e-48 195.7 167 63.5
TAR381G1606 Trochodendron aralioides HOM05D000586 ORTHO05D008681 3.7e-48 195.3 167 62.3
Carub.0007s0556 Capsella rubella HOM05D000586 ORTHO05D008681 4.8e-48 194.9 167 63.5
Haze_02225 Corylus avellana HOM05D000586 ORTHO05D008681 6.3e-48 194.5 166 64.5
Lalb_Chr16g0391381 Lupinus albus HOM05D000586 ORTHO05D008681 6.3e-48 194.5 162 63.0
Manes.11G092006 Manihot esculenta HOM05D000586 ORTHO05D008681 6.3e-48 194.5 167 62.3
PGSC0003DMG400001616 Solanum tuberosum HOM05D000586 ORTHO05D008681 6.3e-48 194.5 132 72.0
MBI05_g26502_MAGBIO Magnolia biondii HOM05D000586 ORTHO05D008681 8.2e-48 194.1 167 65.3
THA.LOC104807288 Tarenaya hassleriana HOM05D000586 ORTHO05D008681 8.2e-48 194.1 167 62.3
EL10Ac9g21609 Beta vulgaris HOM05D000586 ORTHO05D008681 1.4e-47 193.4 168 61.3
Dinv41988 Davidia involucrata HOM05D000586 ORTHO05D008681 1.4e-47 193.4 171 63.7
Thhalv10026220m.g Eutrema salsugineum HOM05D000586 ORTHO05D008681 1.4e-47 193.4 162 63.6
Lj9A383T66 Lonicera japonica HOM05D000586 ORTHO05D008681 1.4e-47 193.4 132 72.7
arahy.Tifrunner.gnm1.ann1.89FNHL Arachis hypogaea HOM05D000586 ORTHO05D008681 1.8e-47 193.0 164 62.8
ClCG11G003770 Citrullus lanatus HOM05D000586 ORTHO05D008681 1.8e-47 193.0 170 63.5
COL.COLO4_10614 Corchorus olitorius HOM05D000586 ORTHO05D008681 1.8e-47 193.0 133 72.9
HPP92_020672 Vanilla planifolia HOM05D000586 ORTHO05D008681 1.8e-47 193.0 135 71.1
Actinidia20476 Actinidia chinensis HOM05D000586 ORTHO05D008681 2.4e-47 192.6 168 63.7
CARHR243030 Cardamine hirsuta HOM05D000586 ORTHO05D008681 2.4e-47 192.6 167 62.3
Lsat_1_v5_gn_4_67621 Lactuca sativa HOM05D000586 ORTHO05D008681 2.4e-47 192.6 165 63.0
AL7G16470 Arabidopsis lyrata HOM05D000586 ORTHO05D008681 3.1e-47 192.2 167 62.9
Pp3c12_16410 Physcomitrium patens HOM05D000586 ORTHO05D008681 3.1e-47 192.2 161 62.7
CiPaw.05G074600 Carya illinoinensis HOM05D000586 ORTHO05D008681 4.1e-47 191.8 166 63.9
DCAR_022927 Daucus carota HOM05D000586 ORTHO05D008681 4.1e-47 191.8 174 63.2
Lj1g0002953 Lotus japonicus HOM05D000586 ORTHO05D008681 4.1e-47 191.8 166 62.0
MD00G1066800 Malus domestica HOM05D000586 ORTHO05D008681 4.1e-47 191.8 167 61.1
PSO170G6416 Papaver somniferum HOM05D000586 ORTHO05D008681 4.1e-47 191.8 162 64.2
Prupe.8G082300 Prunus persica HOM05D000586 ORTHO05D008681 4.1e-47 191.8 166 62.7
Sabra04G0110300 Salix brachista HOM05D000586 ORTHO05D008681 4.1e-47 191.8 167 62.9
VMungo1309G1236 Vigna mungo HOM05D000586 ORTHO05D008681 5.3e-47 191.4 166 61.4
arahy.Tifrunner.gnm1.ann1.I5P0FU Arachis hypogaea HOM05D000586 ORTHO05D008681 6.9e-47 191.0 160 63.8
MSTRG.20023 Avicennia marina HOM05D000586 ORTHO05D008681 6.9e-47 191.0 161 63.4
Duzib052G0483 Durio zibethinus HOM05D000586 ORTHO05D008681 6.9e-47 191.0 167 61.1
Psat5g000280 Pisum sativum HOM05D000586 ORTHO05D008681 6.9e-47 191.0 178 60.1
Sed0014971 Sechium edule HOM05D000586 ORTHO05D008681 6.9e-47 191.0 166 63.3
Aa31LG2G15790 Aethionema arabicum HOM05D000586 ORTHO05D008681 9.0e-47 190.7 167 62.3
Zm00001eb377790 Zea mays HOM05D000586 ORTHO05D008681 9.0e-47 190.7 169 60.9
Peaxi162Scf00362g01176 Petunia axillaris HOM05D000586 ORTHO05D008681 1.2e-46 190.3 172 61.0
Solyc01g110550.3 Solanum lycopersicum HOM05D000586 ORTHO05D008681 1.2e-46 190.3 164 62.8
A03p63110 Brassica napus HOM05D000586 ORTHO05D001010 1.5e-46 189.9 162 62.3
BraA03t15387Z Brassica rapa HOM05D000586 ORTHO05D008681 1.5e-46 189.9 162 62.3
CsaV3_2G015360 Cucumis sativus L. HOM05D000586 ORTHO05D008681 1.5e-46 189.9 167 63.5
Hund06294 Selenicereus undatus HOM05D000586 ORTHO05D008681 1.5e-46 189.9 166 60.8
Migut.B00127 Erythranthe guttata HOM05D000586 ORTHO05D008681 2.0e-46 189.5 175 58.9
Eucgr.G01743 Eucalyptus grandis HOM05D000586 ORTHO05D008681 2.0e-46 189.5 166 63.3
FAN20G2293 Fragaria x ananassa HOM05D000586 ORTHO05D008681 2.0e-46 189.5 167 61.1
Phvul.009G002100 Phaseolus vulgaris HOM05D000586 ORTHO05D008681 2.0e-46 189.5 165 60.6
FAN24G2793 Fragaria x ananassa HOM05D000586 ORTHO05D008681 2.6e-46 189.1 167 61.1
PSO210G2611 Papaver somniferum HOM05D000586 ORTHO05D008681 2.6e-46 189.1 162 63.6
Ah.01g018630 Amaranthus hybridus HOM05D000586 ORTHO05D008681 3.4e-46 188.7 167 59.9
FvH4_2g10740 Fragaria vesca HOM05D000586 ORTHO05D008681 4.5e-46 188.3 167 61.7
RcHm_v2.0_Chr6g0268531 Rosa chinensis HOM05D000586 ORTHO05D008681 4.5e-46 188.3 167 61.1
Sopen01g052670 Solanum pennellii HOM05D000586 ORTHO05D008681 4.5e-46 188.3 164 62.2
Sc08g0000980 Simmondsia chinensis HOM05D000586 ORTHO05D008681 5.9e-46 188.0 170 62.4
Ca_15328_v3 Cicer arietinum L. HOM05D000586 ORTHO05D008681 7.7e-46 187.6 177 59.3
HanXRQChr10g0294191 Helianthus annuus HOM05D000586 ORTHO05D008681 7.7e-46 187.6 162 64.8
Medtr3g117600 Medicago truncatula HOM05D000586 ORTHO05D008681 1.0e-45 187.2 177 59.3
CAN.G1329.7 Capsicum annuum HOM05D000586 ORTHO05D008681 5.0e-45 184.9 170 60.0
Oeu020677.1 Olea europaea HOM05D000586 ORTHO05D008681 5.0e-45 184.9 168 61.9
FAN15G3000 Fragaria x ananassa HOM05D000586 ORTHO05D008681 1.4e-44 183.3 166 60.8
Dinv23444 Davidia involucrata HOM05D000586 ORTHO05D008681 4.2e-44 181.8 168 59.5
Hma1.2p1_0032F.1_g019990 Hydrangea macrophylla HOM05D000586 ORTHO05D008681 5.5e-44 181.4 121 73.6
ECA234G3975 Erigeron canadensis HOM05D000586 ORTHO05D008681 7.2e-44 181.0 158 62.7
Os06g0137600 Oryza sativa ssp. japonica HOM05D000586 ORTHO05D008681 7.2e-44 181.0 170 57.1
unitig_60.g25431 Utricularia gibba HOM05D000586 ORTHO05D008681 7.2e-44 181.0 169 60.9
vmacro02046 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 7.2e-44 181.0 120 75.0
vmacro22695 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 7.2e-44 181.0 120 75.0
AUR62016853 Chenopodium quinoa HOM05D000586 ORTHO05D008681 9.4e-44 180.6 163 60.7
AUR62010365 Chenopodium quinoa HOM05D000586 ORTHO05D008681 7.9e-43 177.6 164 60.4
CDE01G0237 Ceratophyllum demersum HOM05D000586 ORTHO05D008681 1.0e-42 177.2 175 56.0
Lj9A385G33 Lonicera japonica HOM05D000586 ORTHO05D008681 1.0e-42 177.2 120 72.5
CANSAT11G1696 Cannabis sativa HOM05D000586 ORTHO05D008681 5.1e-42 174.9 120 72.5
VMungo1309G1424 Vigna mungo HOM05D000586 ORTHO05D008681 1.5e-41 173.3 119 70.6
MELO3C020750.2 Cucumis melo HOM05D000586 ORTHO05D008681 1.3e-40 170.2 189 54.0
Mapoly0005s0278 Marchantia polymorpha HOM05D000586 ORTHO05D008681 1.1e-39 167.2 189 51.3
Cc02_g16800 Coffea canephora HOM05D000586 ORTHO05D008681 1.8e-39 166.4 147 62.6
Rhsim11G0184900 Rhododendron simsii HOM05D000586 ORTHO05D008681 4.1e-39 165.2 160 55.6
Gohir.A13G086800 Gossypium hirsutum HOM05D000586 ORTHO05D008681 1.5e-38 163.3 168 57.1
GSVIVG01024154001 Vitis vinifera HOM05D000586 ORTHO05D008681 1.5e-38 163.3 147 60.5
SGA_v2.0_scaffold58G20435 Striga asiatica HOM05D000586 ORTHO05D008681 3.4e-38 162.2 256 44.1
Oeu046110.1 Olea europaea HOM05D000586 ORTHO05D008681 3.2e-36 155.6 156 59.0
Duzib132G1196 Durio zibethinus HOM05D000586 ORTHO05D008681 1.4e-34 150.2 187 50.8
TPR.G32182 Trifolium pratense HOM05D000586 ORTHO05D008681 1.4e-34 150.2 149 59.7
MCO15G163 Micromonas commoda HOM05D000586 ORTHO05D008681 2.8e-32 142.5 173 48.6
SEGI_30788 Sequoiadendron giganteum HOM05D000586 ORTHO05D008681 1.8e-26 123.2 98 61.2
Cre02.g145000 Chlamydomonas reinhardtii HOM05D000586 ORTHO05D008681 2.6e-25 119.4 155 43.2
CSS0047409 Camellia sinensis var. sinensis HOM05D000586 ORTHO05D008681 1.3e-21 107.1 108 57.4
ATR0910G002 Amborella trichopoda HOM05D000586 ORTHO05D008681 3.2e-20 102.4 114 50.9
PRCOL_00004217 Prasinoderma coloniale HOM05D000586 ORTHO05D008681 9.4e-20 100.9 149 40.3
Sed0014045 Sechium edule HOM05D000586 ORTHO05D008681 4.0e-18 95.5 166 41.6
Nn017s41473 Nelumbo nucifera HOM05D000586 ORTHO05D008681 2.2e-16 89.7 62 72.6
VMungo0720G0167 Vigna mungo HOM05D000028 ORTHO05D001812 1.8e-15 86.7 87 54.0
Atru.chr5.3178 Acer truncatum HOM05D000586 ORTHO05D008681 7.0e-15 84.7 97 53.6
BcaB07g33434 Brassica carinata HOM05D000586 ORTHO05D008681 5.9e-14 81.6 71 60.6
MD10G1061600 Malus domestica HOM05D000586 ORTHO05D008681 6.3e-08 61.6 56 58.9


User provided reference genes

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