Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO337G0053 Selaginella moellendorffii HOM05D005970 ORTHO05D007146 7.7e-225 783.5 397 100.0
SMO336G0028 Selaginella moellendorffii HOM05D005970 ORTHO05D007146 6.5e-30 136.0 244 41.8
SMO337G0034 Selaginella moellendorffii HOM05D005970 ORTHO05D007146 5.5e-29 132.9 244 41.0
SMO337G0042 Selaginella moellendorffii HOM05D005970 ORTHO05D007146 2.4e-24 117.5 243 39.1
CBR_g2768 Chara braunii HOM05D005970 ORTHO05D007146 3.7e-17 93.6 217 35.9
Peaxi162Scf00286g00235 Petunia axillaris HOM05D005970 ORTHO05D007146 1.0e-14 85.5 201 34.3
CSS0014236 Camellia sinensis var. sinensis HOM05D005970 ORTHO05D007146 1.5e-13 81.6 208 32.7
Potri.014G150800 Populus trichocarpa HOM05D005970 ORTHO05D007146 1.5e-13 81.6 212 31.1
MBI08_g17320_MAGBIO Magnolia biondii HOM05D005970 ORTHO05D007146 3.2e-13 80.5 201 33.8
Nn1g09841 Nelumbo nucifera HOM05D005970 ORTHO05D007146 5.5e-13 79.7 208 32.2
Dinv22666 Davidia involucrata HOM05D005970 ORTHO05D007146 7.2e-13 79.3 211 31.8
Duzib151G0884 Durio zibethinus HOM05D005970 ORTHO05D007146 7.2e-13 79.3 186 33.9
Nitab4.5_0002313g0060 Nicotiana tabacum HOM05D005970 ORTHO05D007146 9.4e-13 79.0 201 33.3
Actinidia32934 Actinidia chinensis HOM05D005970 ORTHO05D007146 1.2e-12 78.6 208 32.7
COL.COLO4_24350 Corchorus olitorius HOM05D005970 ORTHO05D007146 1.2e-12 78.6 205 30.7
Atru.chr3.1658_Atru.chr3.1659 Acer truncatum HOM05D005970 ORTHO05D007146 2.1e-12 77.8 206 31.6
CAN.G710.55 Capsicum annuum HOM05D005970 ORTHO05D007146 2.1e-12 77.8 201 32.3
FAN12G0387 Fragaria x ananassa HOM05D005970 ORTHO05D007146 2.1e-12 77.8 199 32.7
Solyc09g098450.4 Solanum lycopersicum HOM05D005970 ORTHO05D007146 2.1e-12 77.8 201 31.3
HPP92_002722 Vanilla planifolia HOM05D005970 ORTHO05D007146 2.1e-12 77.8 209 29.7
CANSAT80G1971 Cannabis sativa HOM05D005970 ORTHO05D007146 2.7e-12 77.4 214 32.7
FvH4_4g11690 Fragaria vesca HOM05D005970 ORTHO05D007146 2.7e-12 77.4 199 32.7
FAN12G1273 Fragaria x ananassa HOM05D005970 ORTHO05D007146 2.7e-12 77.4 199 32.7
Sabra02G0176700 Salix brachista HOM05D005970 ORTHO05D007146 2.7e-12 77.4 204 30.9
Sopen09g036380 Solanum pennellii HOM05D005970 ORTHO05D007146 2.7e-12 77.4 201 31.3
TPR.G8892 Trifolium pratense HOM05D005970 ORTHO05D007146 3.6e-12 77.0 206 28.2
Mapoly0123s0015 Marchantia polymorpha HOM05D005970 ORTHO05D007146 4.7e-12 76.6 237 31.2
Nitab4.5_0001049g0010 Nicotiana tabacum HOM05D005970 ORTHO05D007146 4.7e-12 76.6 201 32.3
Os04g0489100 Oryza sativa ssp. japonica HOM05D005970 ORTHO05D007146 4.7e-12 76.6 207 31.9
Prupe.1G181900 Prunus persica HOM05D005970 ORTHO05D007146 4.7e-12 76.6 205 31.2
RcHm_v2.0_Chr4g0408981 Rosa chinensis HOM05D005970 ORTHO05D007146 4.7e-12 76.6 196 33.7
HPP92_001263 Vanilla planifolia HOM05D005970 ORTHO05D007146 4.7e-12 76.6 212 31.6
Ca_11416_v3 Cicer arietinum L. HOM05D005970 ORTHO05D007146 1.4e-11 75.1 206 28.2
FAN07G1016 Fragaria x ananassa HOM05D005970 ORTHO05D007146 1.4e-11 75.1 199 32.2
Gorai.005G017800 Gossypium raimondii HOM05D005970 ORTHO05D007146 1.4e-11 75.1 205 29.8
TAR362G0058 Trochodendron aralioides HOM05D005970 ORTHO05D007146 1.4e-11 75.1 219 30.6
AagrBONN_evm.TU.Sc2ySwM_368.849 Anthoceros agrestis HOM05D005970 ORTHO05D007146 1.8e-11 74.7 48 72.9
AagrBONN_evm.TU.Sc2ySwM_368.857 Anthoceros agrestis HOM05D005970 ORTHO05D007146 1.8e-11 74.7 48 72.9
Psat6g242520 Pisum sativum HOM05D005970 ORTHO05D007146 2.3e-11 74.3 206 29.1
ATR0618G312 Amborella trichopoda HOM05D005970 ORTHO05D007146 3.0e-11 73.9 216 29.6
Medtr1g116780 Medicago truncatula HOM05D005970 ORTHO05D007146 3.0e-11 73.9 206 29.1
arahy.Tifrunner.gnm1.ann1.ILR90A Arachis hypogaea HOM05D005970 ORTHO05D007146 5.2e-11 73.2 248 25.4
Ciclev10023314m.g Citrus clementina HOM05D005970 ORTHO05D007146 5.2e-11 73.2 205 29.3
Gohir.D02G014300 Gossypium hirsutum HOM05D005970 ORTHO05D007146 5.2e-11 73.2 205 29.3
Eucgr.A00211 Eucalyptus grandis HOM05D005970 ORTHO05D007146 6.7e-11 72.8 207 29.5
Lj5g0014069 Lotus japonicus HOM05D005970 ORTHO05D007146 8.8e-11 72.4 206 28.6
Manes.04G050700 Manihot esculenta HOM05D005970 ORTHO05D007146 8.8e-11 72.4 206 29.6
GSVIVG01013548001 Vitis vinifera HOM05D005970 ORTHO05D007146 8.8e-11 72.4 208 30.3
Cc00_g08710 Coffea canephora HOM05D005970 ORTHO05D007146 2.0e-10 71.2 197 31.5
Glyma.20G248000 Glycine max HOM05D005970 ORTHO05D007146 2.0e-10 71.2 206 27.2
Lsat_1_v5_gn_4_37800 Lactuca sativa HOM05D005970 ORTHO05D007146 2.0e-10 71.2 198 28.8
ECA234G4469 Erigeron canadensis HOM05D005970 ORTHO05D007146 2.6e-10 70.9 198 30.3
Thecc.04G181600 Theobroma cacao HOM05D005970 ORTHO05D007146 4.4e-10 70.1 159 30.8
Phvul.007G002300 Phaseolus vulgaris HOM05D005970 ORTHO05D007146 5.7e-10 69.7 206 27.2
SMO367G0517 Selaginella moellendorffii HOM05D005970 ORTHO05D007146 9.7e-10 68.9 77 57.1
VMungo0720G0532 Vigna mungo HOM05D005970 ORTHO05D007146 9.7e-10 68.9 206 27.7
arahy.Tifrunner.gnm1.ann1.R0ZLJW Arachis hypogaea HOM05D005970 ORTHO05D007146 1.3e-09 68.6 260 24.2
HPP92_001247 Vanilla planifolia HOM05D005970 ORTHO05D007146 2.2e-09 67.8 220 29.1
CiPaw.01G106400 Carya illinoinensis HOM05D005970 ORTHO05D007146 3.7e-09 67.0 48 64.6
Haze_11055 Corylus avellana HOM05D005970 ORTHO05D007146 3.7e-09 67.0 48 62.5
Cpa.g.sc164.4 Carica papaya HOM05D005970 ORTHO05D007146 4.8e-09 66.6 66 48.5
Gohir.A02G013401 Gossypium hirsutum HOM05D005970 ORTHO05D007146 4.8e-09 66.6 159 31.4
Potri.002G231534 Populus trichocarpa HOM05D005970 ORTHO05D007146 4.8e-09 66.6 51 58.8
THA.LOC104800916 Tarenaya hassleriana HOM05D005970 ORTHO05D007146 4.8e-09 66.6 207 30.4
BolC5t29189H Brassica oleracea HOM05D005970 ORTHO05D007146 6.3e-09 66.2 182 30.8
HanXRQChr17g0557031 Helianthus annuus HOM05D005970 ORTHO05D007146 6.3e-09 66.2 48 62.5
Sabra14G0114200 Salix brachista HOM05D005970 ORTHO05D007146 8.2e-09 65.9 90 38.9
Rhsim09G0037500 Rhododendron simsii HOM05D005970 ORTHO05D007146 1.1e-08 65.5 54 57.4
C08p02230 Brassica napus HOM05D005970 ORTHO05D007146 1.4e-08 65.1 199 30.2
BolC8t47015H Brassica oleracea HOM05D005970 ORTHO05D007146 1.4e-08 65.1 199 30.2
ClCG08G003970 Citrullus lanatus HOM05D005970 ORTHO05D007146 1.4e-08 65.1 48 62.5
vmacro00562 Vaccinium macrocarpon HOM05D005970 ORTHO05D007146 1.8e-08 64.7 48 66.7
Hma1.2p1_1477F.1_g285890 Hydrangea macrophylla HOM05D005970 ORTHO05D007146 2.4e-08 64.3 48 62.5
Pp3c6_14360 Physcomitrium patens HOM05D005970 ORTHO05D007146 3.1e-08 63.9 48 64.6
Sed0012260 Sechium edule HOM05D005970 ORTHO05D007146 3.1e-08 63.9 48 62.5
Aqoxy2G04048 Aquilegia oxysepala HOM05D005970 ORTHO05D007146 4.1e-08 63.5 203 29.6
Pp3c5_12210 Physcomitrium patens HOM05D005970 ORTHO05D007146 4.1e-08 63.5 227 30.0
QL10p046561 Quercus lobata HOM05D005970 ORTHO05D007146 4.1e-08 63.5 206 28.6
Carub.0001s0513 Capsella rubella HOM05D005970 ORTHO05D007146 5.3e-08 63.2 202 29.2
Lj3A262T16 Lonicera japonica HOM05D005970 ORTHO05D007146 7.0e-08 62.8 51 60.8
Lalb_Chr06g0164591 Lupinus albus HOM05D005970 ORTHO05D007146 7.0e-08 62.8 48 58.3
Thhalv10006938m.g Eutrema salsugineum HOM05D005970 ORTHO05D007146 9.1e-08 62.4 202 29.7
PGR083G2204 Punica granatum HOM05D005970 ORTHO05D007146 1.2e-07 62.0 48 58.3
A08p36290 Brassica napus HOM05D005970 ORTHO05D007146 2.6e-07 60.8 202 29.2
BraA08t35533Z Brassica rapa HOM05D005970 ORTHO05D007146 2.6e-07 60.8 202 29.2
Sp1g04590 Schrenkiella parvula HOM05D005970 ORTHO05D007146 2.6e-07 60.8 202 29.2
MELO3C011504.2 Cucumis melo HOM05D005970 ORTHO05D007146 3.5e-07 60.5 48 60.4
AT1G05790 Arabidopsis thaliana HOM05D005970 ORTHO05D007146 7.7e-07 59.3 202 28.7
CsaV3_6G003170 Cucumis sativus L. HOM05D005970 ORTHO05D007146 7.7e-07 59.3 48 58.3
SMO199G0009 Selaginella moellendorffii HOM05D005970 ORTHO05D007146 7.7e-07 59.3 100 41.0
Sc22g0002260 Simmondsia chinensis HOM05D005970 ORTHO05D007146 1.0e-06 58.9 201 29.9
Ah.12g062330 Amaranthus hybridus HOM05D005970 ORTHO05D007146 1.3e-06 58.5 210 29.0
C05p04110 Brassica napus HOM05D005970 ORTHO05D007146 1.3e-06 58.5 184 29.9
A10p04500 Brassica napus HOM05D005970 ORTHO05D007146 1.7e-06 58.2 200 28.5
CARHR005310 Cardamine hirsuta HOM05D005970 ORTHO05D007146 1.7e-06 58.2 202 28.2
Aa31LG1G8570 Aethionema arabicum HOM05D005970 ORTHO05D007146 2.2e-06 57.8 50 56.0
BraA10t42716Z Brassica rapa HOM05D005970 ORTHO05D007146 2.9e-06 57.4 262 26.7
AUR62042870 Chenopodium quinoa HOM05D005970 ORTHO05D007146 2.9e-06 57.4 48 54.2
Zm00001eb425400 Zea mays HOM05D005970 ORTHO05D007146 2.9e-06 57.4 48 56.2
AL1G15700 Arabidopsis lyrata HOM05D005970 ORTHO05D007146 3.8e-06 57.0 202 28.7


User provided reference genes

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