Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO337G0046 Selaginella moellendorffii HOM05D011042 ORTHO05D004127 3.6e-244 847.8 431 100.0
SMO209G0005 Selaginella moellendorffii HOM05D011042 ORTHO05D004127 2.6e-226 788.5 426 94.6
SMO200G0200 Selaginella moellendorffii HOM05D011042 ORTHO05D004127 3.0e-222 775.0 426 93.4
SMO200G0190 Selaginella moellendorffii HOM05D011042 ORTHO05D377756 1.5e-221 772.7 426 93.4
SMO200G0176 Selaginella moellendorffii HOM05D011042 ORTHO05D374215 4.3e-221 771.2 449 90.0
SMO356G0254 Selaginella moellendorffii HOM05D011042 ORTHO05D004127 2.8e-172 609.0 446 73.5
SMO146G0231 Selaginella moellendorffii HOM05D011042 ORTHO05D004127 1.0e-166 590.5 443 72.9
SMO351G0063 Selaginella moellendorffii HOM05D011042 ORTHO05D004127 3.3e-152 542.3 444 65.8
SMO111G0065 Selaginella moellendorffii HOM05D011042 ORTHO05D004127 1.9e-136 490.0 441 60.1
SMO173G0046 Selaginella moellendorffii HOM05D011042 ORTHO05D375473 4.0e-134 482.3 336 74.7
SMO173G0013 Selaginella moellendorffii HOM05D011042 ORTHO05D373856 2.9e-124 449.5 434 59.4
SMO173G0062 Selaginella moellendorffii HOM05D011042 ORTHO05D377078 1.4e-118 430.6 394 63.7
SMO146G0195 Selaginella moellendorffii HOM05D011042 ORTHO05D379290 2.3e-81 307.0 338 53.6
SMO170G0009 Selaginella moellendorffii HOM05D011042 ORTHO05D374791 1.7e-60 237.7 337 52.5
SMO356G0492 Selaginella moellendorffii HOM05D011042 ORTHO05D375238 6.1e-42 176.0 394 37.1
SMO141G0164 Selaginella moellendorffii HOM05D011042 ORTHO05D374707 2.3e-41 174.1 214 57.5
SMO356G0441 Selaginella moellendorffii HOM05D011042 ORTHO05D377317 3.3e-35 153.7 214 48.6
Pp3c4_24790 Physcomitrium patens HOM05D003873 ORTHO05D004127 4.0e-17 93.6 196 30.1
SMO141G0289 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 5.2e-17 93.2 187 32.6
Pp3c13_3890 Physcomitrium patens HOM05D003873 ORTHO05D004127 1.5e-16 91.7 183 32.2
CBR_g23787 Chara braunii HOM05D003873 ORTHO05D004127 1.1e-14 85.5 174 31.6
ECA233G5425 Erigeron canadensis HOM05D003873 ORTHO05D004127 1.4e-14 85.1 178 29.8
Duzib114G0555 Durio zibethinus HOM05D003873 ORTHO05D004127 2.4e-14 84.3 170 31.2
Prupe.2G262000 Prunus persica HOM05D003873 ORTHO05D004127 2.4e-14 84.3 174 29.9
RcHm_v2.0_Chr1g0371921 Rosa chinensis HOM05D003873 ORTHO05D004127 3.2e-14 84.0 174 29.9
Thecc.10G182200 Theobroma cacao HOM05D003873 ORTHO05D004127 3.2e-14 84.0 172 30.8
SMO013G0025 Selaginella moellendorffii HOM05D011042 ORTHO05D378378 7.1e-14 82.8 163 39.9
COL.COLO4_19435 Corchorus olitorius HOM05D003873 ORTHO05D004127 9.2e-14 82.4 169 31.4
Mapoly0093s0078 Marchantia polymorpha HOM05D003873 ORTHO05D004127 2.1e-13 81.3 182 30.2
Cfa001222 Carpinus fangiana HOM05D003873 ORTHO05D004127 3.5e-13 80.5 174 31.0
Carub.0004s2288 Capsella rubella HOM05D003873 ORTHO05D004127 4.6e-13 80.1 202 28.2
Potri.013G092700 Populus trichocarpa HOM05D003873 ORTHO05D004127 4.6e-13 80.1 179 31.3
QL08p064588 Quercus lobata HOM05D003873 ORTHO05D004127 4.6e-13 80.1 174 31.0
GSVIVG01032680001 Vitis vinifera HOM05D003873 ORTHO05D004127 4.6e-13 80.1 169 32.5
MD01G1164200 Malus domestica HOM05D003873 ORTHO05D004127 6.0e-13 79.7 174 31.0
AL4G38460 Arabidopsis lyrata HOM05D003873 ORTHO05D004127 7.8e-13 79.3 201 28.9
Dinv34475 Davidia involucrata HOM05D003873 ORTHO05D004127 1.0e-12 79.0 169 31.4
Solyc05g052260.3 Solanum lycopersicum HOM05D003873 ORTHO05D004127 1.0e-12 79.0 176 30.7
BolC4t28343H Brassica oleracea HOM05D000114 ORTHO05D004127 1.3e-12 78.6 179 30.2
A05p01810 Brassica napus HOM05D003873 ORTHO05D004127 1.7e-12 78.2 179 29.6
Rhsim09G0185200 Rhododendron simsii HOM05D003873 ORTHO05D004127 1.7e-12 78.2 174 29.9
SMO119G0134 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 1.7e-12 78.2 179 33.0
SMO170G0066 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 1.7e-12 78.2 175 29.7
CAN.G203.49 Capsicum annuum HOM05D003873 ORTHO05D004127 2.3e-12 77.8 176 30.7
Duzib128G1260 Durio zibethinus HOM05D003873 ORTHO05D004127 2.3e-12 77.8 169 30.8
Lsat_1_v5_gn_9_122981 Lactuca sativa HOM05D003873 ORTHO05D004127 2.3e-12 77.8 176 28.4
Phvul.001G074800 Phaseolus vulgaris HOM05D003873 ORTHO05D004127 2.3e-12 77.8 181 29.3
Psat6g035920 Pisum sativum HOM05D003873 ORTHO05D004127 2.3e-12 77.8 177 28.8
SMO198G0098 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 2.3e-12 77.8 229 29.3
TWI09G0384 Tripterygium wilfordii HOM05D003873 ORTHO05D004127 2.3e-12 77.8 176 30.1
AT2G40600 Arabidopsis thaliana HOM05D003873 ORTHO05D004127 3.0e-12 77.4 179 30.2
Hma1.2p1_0292F.1_g115910 Hydrangea macrophylla HOM05D003873 ORTHO05D004127 3.0e-12 77.4 169 30.8
Manes.07G140600 Manihot esculenta HOM05D003873 ORTHO05D004127 3.0e-12 77.4 169 32.0
Medtr1g007640 Medicago truncatula HOM05D003873 ORTHO05D004127 3.0e-12 77.4 177 29.4
PGR044G2565 Punica granatum HOM05D003873 ORTHO05D004127 3.0e-12 77.4 179 29.6
arahy.Tifrunner.gnm1.ann1.I2EQP5 Arachis hypogaea HOM05D003873 ORTHO05D004127 3.9e-12 77.0 174 30.5
BcaC02g12725 Brassica carinata HOM05D003873 ORTHO05D004127 3.9e-12 77.0 179 30.2
Gohir.A13G006800 Gossypium hirsutum HOM05D003873 ORTHO05D004127 3.9e-12 77.0 168 29.8
Gohir.D13G007000 Gossypium hirsutum HOM05D003873 ORTHO05D004127 3.9e-12 77.0 168 29.8
Gorai.013G007200 Gossypium raimondii HOM05D003873 ORTHO05D004127 3.9e-12 77.0 168 29.8
Nitab4.5_0002279g0070 Nicotiana tabacum HOM05D003873 ORTHO05D004127 3.9e-12 77.0 176 30.1
SHI30175 Sapria himalayana HOM05D003873 ORTHO05D004127 3.9e-12 77.0 173 28.9
TPR.G24518 Trifolium pratense HOM05D003873 ORTHO05D004127 3.9e-12 77.0 177 29.4
HanXRQChr17g0560751 Helianthus annuus HOM05D003873 ORTHO05D004127 5.1e-12 76.6 169 29.0
SMO119G0485 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 5.1e-12 76.6 161 34.8
PGSC0003DMG400011653 Solanum tuberosum HOM05D003873 ORTHO05D004127 5.1e-12 76.6 176 29.5
Thecc.10G182600 Theobroma cacao HOM05D003873 ORTHO05D004127 5.1e-12 76.6 169 30.2
CARHR135690 Cardamine hirsuta HOM05D003873 ORTHO05D004127 6.6e-12 76.3 179 29.6
Nitab4.5_0000375g0180 Nicotiana tabacum HOM05D003873 ORTHO05D004127 6.6e-12 76.3 176 30.1
arahy.Tifrunner.gnm1.ann1.26CUCK Arachis hypogaea HOM05D003873 ORTHO05D004127 8.6e-12 75.9 170 30.0
Cc02_g05430 Coffea canephora HOM05D003873 ORTHO05D004127 8.6e-12 75.9 176 29.5
Sabra13G0064000 Salix brachista HOM05D003873 ORTHO05D004127 8.6e-12 75.9 169 31.4
Sp4g22920 Schrenkiella parvula HOM05D003873 ORTHO05D004127 8.6e-12 75.9 178 29.8
vmacro09968 Vaccinium macrocarpon HOM05D003873 ORTHO05D004127 1.1e-11 75.5 149 32.9
C04p02110 Brassica napus HOM05D003873 ORTHO05D004127 1.5e-11 75.1 179 29.6
BolC4t21859H Brassica oleracea HOM05D003873 ORTHO05D004127 1.5e-11 75.1 179 29.6
BraA05t19179Z Brassica rapa HOM05D003873 ORTHO05D004127 1.5e-11 75.1 187 28.3
CANSAT56G3412 Cannabis sativa HOM05D003873 ORTHO05D004127 1.5e-11 75.1 174 28.7
Eucgr.J00121 Eucalyptus grandis HOM05D003873 ORTHO05D004127 1.5e-11 75.1 171 29.2
Peaxi162Scf00167g01217 Petunia axillaris HOM05D003873 ORTHO05D004127 1.5e-11 75.1 176 29.0
THA.LOC104824360 Tarenaya hassleriana HOM05D003873 ORTHO05D004127 1.5e-11 75.1 169 30.2
Atru.chr1.2930 Acer truncatum HOM05D003873 ORTHO05D004127 1.9e-11 74.7 175 29.1
BcaC02g07324 Brassica carinata HOM05D000114 ORTHO05D004127 1.9e-11 74.7 179 29.6
unitig_747.g21397 Utricularia gibba HOM05D003873 ORTHO05D004127 1.9e-11 74.7 169 31.4
CiPaw.02G198500 Carya illinoinensis HOM05D003873 ORTHO05D004127 3.3e-11 73.9 170 31.2
PSO210G0819 Papaver somniferum HOM05D000620 ORTHO05D000537 3.3e-11 73.9 184 29.3
CARHR135710 Cardamine hirsuta HOM05D003873 ORTHO05D004127 4.3e-11 73.6 177 29.4
CDE06G1522 Ceratophyllum demersum HOM05D003873 ORTHO05D004127 4.3e-11 73.6 181 28.2
SMO141G0106 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 4.3e-11 73.6 175 27.4
Hund15823 Selenicereus undatus HOM05D003873 ORTHO05D004127 4.3e-11 73.6 220 26.4
BraA04t18560Z Brassica rapa HOM05D000114 ORTHO05D004127 5.6e-11 73.2 169 30.2
Hma1.2p1_0292F.1_g115890 Hydrangea macrophylla HOM05D003873 ORTHO05D004127 5.6e-11 73.2 169 30.2
BcaB06g29154 Brassica carinata HOM05D003873 ORTHO05D004127 7.3e-11 72.8 176 30.7
Lsat_1_v5_gn_8_13601 Lactuca sativa HOM05D003873 ORTHO05D004127 7.3e-11 72.8 159 29.6
MBI03_g22825_MAGBIO Magnolia biondii HOM05D003873 ORTHO05D004127 7.3e-11 72.8 168 31.0
TAR369G0800 Trochodendron aralioides HOM05D003873 ORTHO05D004127 7.3e-11 72.8 169 29.6
Atru.BG.255.p Acer truncatum HOM05D003873 ORTHO05D004127 9.6e-11 72.4 168 28.0
A04p31040 Brassica napus HOM05D000114 ORTHO05D004127 9.6e-11 72.4 169 30.2
MELO3C020142.2 Cucumis melo HOM05D003873 ORTHO05D004127 9.6e-11 72.4 170 29.4
Lalb_Chr08g0239001 Lupinus albus HOM05D003873 ORTHO05D004127 9.6e-11 72.4 174 28.2
arahy.Tifrunner.gnm1.ann1.8SN1W1 Arachis hypogaea HOM05D003873 ORTHO05D004127 1.2e-10 72.0 174 27.6
C04p68430 Brassica napus HOM05D000114 ORTHO05D004127 1.2e-10 72.0 169 30.2
arahy.Tifrunner.gnm1.ann1.HNCJ3C Arachis hypogaea HOM05D003873 ORTHO05D004127 1.6e-10 71.6 174 27.6
CsaV3_5G010890 Cucumis sativus L. HOM05D003873 ORTHO05D004127 1.6e-10 71.6 170 29.4
Thhalv10017560m.g Eutrema salsugineum HOM05D003873 ORTHO05D004127 2.1e-10 71.2 190 28.9
Sed0001367 Sechium edule HOM05D003873 ORTHO05D004127 2.1e-10 71.2 170 29.4
Actinidia31621 Actinidia chinensis HOM05D003873 ORTHO05D004127 2.8e-10 70.9 174 28.7
Thecc.10G182400 Theobroma cacao HOM05D003873 ORTHO05D004127 2.8e-10 70.9 165 30.3
FAN06G3214 Fragaria x ananassa HOM05D000009 ORTHO05D000008 3.6e-10 70.5 151 28.5
Glyma.14G145000 Glycine max HOM05D003873 ORTHO05D004127 3.6e-10 70.5 173 28.3
Lj1g0013289 Lotus japonicus HOM05D003873 ORTHO05D004127 3.6e-10 70.5 170 27.1
PSO017G6038 Papaver somniferum HOM05D003873 ORTHO05D004127 3.6e-10 70.5 184 30.4
AL4G38470 Arabidopsis lyrata HOM05D003873 ORTHO05D004127 4.7e-10 70.1 173 29.5
FvH4_7g25700 Fragaria vesca HOM05D003873 ORTHO05D004127 4.7e-10 70.1 151 27.8
FAN03G1281 Fragaria x ananassa HOM05D003873 ORTHO05D004127 4.7e-10 70.1 151 27.8
ATR1127G039 Amborella trichopoda HOM05D003873 ORTHO05D004127 6.2e-10 69.7 161 29.8
AUR62030624 Chenopodium quinoa HOM05D003873 ORTHO05D004127 6.2e-10 69.7 174 28.7
Ciclev10002574m.g Citrus clementina HOM05D003873 ORTHO05D004127 6.2e-10 69.7 176 30.1
AUR62024920 Chenopodium quinoa HOM05D003873 ORTHO05D004127 8.1e-10 69.3 174 29.3
PSO210G1471 Papaver somniferum HOM05D000620 ORTHO05D000537 8.1e-10 69.3 172 29.1
PSO017G6047 Papaver somniferum HOM05D003873 ORTHO05D004127 1.1e-09 68.9 174 30.5
TWI73G0123 Tripterygium wilfordii HOM05D003873 ORTHO05D004127 1.1e-09 68.9 169 29.0
Aqoxy4G02390 Aquilegia oxysepala HOM05D003873 ORTHO05D004127 1.4e-09 68.6 169 29.6
EL10Ac2g02628 Beta vulgaris HOM05D003873 ORTHO05D004127 1.4e-09 68.6 171 29.8
CSS0018140 Camellia sinensis var. sinensis HOM05D003873 ORTHO05D004127 1.4e-09 68.6 144 31.9
Carub.0004s2289 Capsella rubella HOM05D003873 ORTHO05D004127 1.4e-09 68.6 181 28.2
Oeu027748.1 Olea europaea HOM05D003873 ORTHO05D004127 1.4e-09 68.6 144 30.6
SEGI_07333 Sequoiadendron giganteum HOM05D003873 ORTHO05D004127 1.4e-09 68.6 161 31.7
VMungo0647G2356 Vigna mungo HOM05D003873 ORTHO05D004127 1.8e-09 68.2 158 29.1
Ca_12777_v3 Cicer arietinum L. HOM05D003873 ORTHO05D004127 2.4e-09 67.8 149 28.9
TPR.G3290 Trifolium pratense HOM05D003873 ORTHO05D004127 2.4e-09 67.8 172 27.9
Lj1C966G3 Lonicera japonica HOM05D003873 ORTHO05D004127 3.1e-09 67.4 104 34.6
PSO384G4386 Papaver somniferum HOM05D003873 ORTHO05D004127 3.1e-09 67.4 184 29.9
Sc11g0005790 Simmondsia chinensis HOM05D003873 ORTHO05D004127 3.1e-09 67.4 169 30.2
Aa31LG3G1520 Aethionema arabicum HOM05D003873 ORTHO05D004127 4.0e-09 67.0 107 31.8
HPP92_011975 Vanilla planifolia HOM05D003873 ORTHO05D004127 4.0e-09 67.0 169 28.4
Manes.10G000800 Manihot esculenta HOM05D003873 ORTHO05D004127 6.8e-09 66.2 105 34.3
Os03g0336500 Oryza sativa ssp. japonica HOM05D003873 ORTHO05D004127 6.8e-09 66.2 180 28.3
PSO170G1346 Papaver somniferum HOM05D003873 ORTHO05D004127 6.8e-09 66.2 182 29.7
PSO210G0156 Papaver somniferum HOM05D000620 ORTHO05D000537 6.8e-09 66.2 174 29.3
Atru.chr3.3508 Acer truncatum HOM05D003873 ORTHO05D004127 8.9e-09 65.9 145 31.0
Atru.chr3.3515 Acer truncatum HOM05D003873 ORTHO05D004127 8.9e-09 65.9 145 31.0
Cre07.g336850 Chlamydomonas reinhardtii HOM05D003873 ORTHO05D004127 8.9e-09 65.9 104 36.5
Nn2g10324 Nelumbo nucifera HOM05D003873 ORTHO05D004127 8.9e-09 65.9 169 30.8
PSO210G5103 Papaver somniferum HOM05D000620 ORTHO05D000537 8.9e-09 65.9 174 29.3
PSO017G3604 Papaver somniferum HOM05D003873 ORTHO05D004127 1.2e-08 65.5 182 30.2
Sp4g22930 Schrenkiella parvula HOM05D003873 ORTHO05D004127 1.5e-08 65.1 173 28.9
Sopen05g030800 Solanum pennellii HOM05D003873 ORTHO05D004127 1.5e-08 65.1 154 29.9
Aqoxy4G02389 Aquilegia oxysepala HOM05D003873 ORTHO05D004127 2.6e-08 64.3 169 28.4
Lj5g0010993 Lotus japonicus HOM05D003873 ORTHO05D004127 2.6e-08 64.3 156 28.2
PSO384G3509 Papaver somniferum HOM05D003873 ORTHO05D004127 2.6e-08 64.3 169 29.0
Zm00001eb016110 Zea mays HOM05D003873 ORTHO05D004127 2.6e-08 64.3 96 37.5
Psat6g036760 Pisum sativum HOM05D003873 ORTHO05D004127 5.8e-08 63.2 104 34.6
SMO147G0042 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 5.8e-08 63.2 169 28.4
PSO017G0702 Papaver somniferum HOM05D003873 ORTHO05D004127 7.6e-08 62.8 169 28.4
SMO198G0073 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 9.9e-08 62.4 149 27.5
SMO170G0014 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 2.2e-07 61.2 160 30.0
Oeu004079.1 Olea europaea HOM05D003873 ORTHO05D004127 3.8e-07 60.5 87 34.5
SMO145G0080 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 8.4e-07 59.3 226 23.0
Ciclev10002586m.g Citrus clementina HOM05D003873 ORTHO05D004127 2.4e-06 57.8 167 24.6
SMO353G0256 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 3.2e-06 57.4 163 24.5
SalBow3G4343 Salvia bowleyana HOM05D003873 ORTHO05D004127 5.4e-06 56.6 83 34.9
SMO171G0118 Selaginella moellendorffii HOM05D003873 ORTHO05D004127 7.1e-06 56.2 166 24.1
Hma1.2p1_0292F.1_g115900 Hydrangea macrophylla HOM05D003873 ORTHO05D004127 9.3e-06 55.8 126 30.2


User provided reference genes

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