Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 1.4e-206 722.6 350 100.0
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 1.4e-153 546.6 350 80.6
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 7.8e-96 354.8 350 50.3
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 1.3e-90 337.4 355 48.5
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 7.1e-89 331.6 358 46.9
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 2.1e-88 330.1 358 47.5
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 3.5e-88 329.3 357 46.5
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 1.3e-87 327.4 358 46.6
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 3.0e-87 326.2 357 45.9
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 2.5e-86 323.2 358 46.6
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 2.5e-86 323.2 357 45.4
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 3.3e-86 322.8 358 46.1
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 7.3e-86 321.6 358 46.6
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 1.3e-85 320.9 357 46.5
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 1.6e-85 320.5 358 45.0
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 3.6e-85 319.3 358 46.1
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 1.1e-84 317.8 358 45.0
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 1.4e-84 317.4 358 45.5
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 1.8e-84 317.0 320 48.4
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 4.0e-84 315.8 358 45.0
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 4.0e-84 315.8 356 45.5
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 4.0e-84 315.8 360 45.0
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 5.3e-84 315.5 362 44.8
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 6.9e-84 315.1 358 43.9
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 6.9e-84 315.1 358 44.7
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 1.2e-83 314.3 360 45.0
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 1.5e-83 313.9 358 45.3
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 2.0e-83 313.5 358 45.3
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 2.0e-83 313.5 354 46.0
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 5.8e-83 312.0 360 44.7
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 9.9e-83 311.2 369 44.2
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 2.9e-82 309.7 359 44.6
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 3.8e-82 309.3 370 42.4
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 3.8e-82 309.3 391 41.4
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 6.4e-82 308.5 358 44.4
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 1.9e-81 307.0 364 44.2
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 5.4e-81 305.4 358 45.8
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 5.4e-81 305.4 362 43.9
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.1e-80 303.5 358 43.9
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 1.8e-79 300.4 358 44.1
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 2.3e-79 300.1 361 42.4
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 5.1e-79 298.9 359 41.2
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 3.3e-78 296.2 366 43.2
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 4.3e-78 295.8 368 41.6
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 5.6e-78 295.4 358 43.0
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 9.6e-78 294.7 358 43.0
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 9.6e-78 294.7 366 41.5
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 9.6e-78 294.7 366 42.3
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 9.6e-78 294.7 366 42.6
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 2.1e-77 293.5 422 38.4
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 2.1e-77 293.5 366 42.3
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 3.7e-77 292.7 359 41.5
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 6.2e-77 292.0 357 42.6
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 1.8e-76 290.4 367 41.4
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 9.0e-76 288.1 422 37.7
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 1.5e-75 287.3 367 43.3
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 2.9e-74 283.1 338 42.9
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 6.4e-74 282.0 457 36.8
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 1.0e-71 274.6 359 42.1
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 1.3e-69 267.7 368 41.0
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 1.3e-69 267.7 368 41.0
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 1.3e-69 267.7 368 41.0
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 7.6e-67 258.5 363 39.1
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 3.5e-64 249.6 357 38.9
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 1.8e-63 247.3 287 45.6
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 5.7e-62 242.3 463 34.6
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 6.3e-61 238.8 240 48.3
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 3.1e-60 236.5 287 44.3
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 4.5e-59 232.6 383 35.0
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 1.2e-51 208.0 198 50.0
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 1.2e-51 208.0 197 50.8
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 3.6e-48 196.4 232 42.7
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 3.6e-48 196.4 344 36.9
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 8.5e-42 175.3 374 33.2
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 5.5e-41 172.6 424 28.5
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 9.4e-41 171.8 152 50.7
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 6.7e-39 165.6 153 49.0
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 9.7e-38 161.8 216 43.1
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 4.2e-33 146.4 136 52.9
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 2.1e-32 144.1 248 37.5
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 1.7e-29 134.4 394 27.4
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 1.5e-25 121.3 112 50.9
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 2.2e-21 107.5 109 47.7
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 3.5e-19 100.1 112 47.3
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 1.5e-17 94.7 124 43.5
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 9.5e-17 92.0 162 32.7
SalBow7G1135 Salvia bowleyana HOM05D007327 ORTHO05D009342 1.0e-15 88.6 105 42.9
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 3.0e-15 87.0 75 50.7
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 5.7e-14 82.8 75 42.7
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 5.7e-14 82.8 75 42.7
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 4.1e-12 76.6 74 44.6
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.7e-10 71.2 74 51.4
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.3e-10 70.9 74 50.0
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.9e-10 70.5 74 50.0
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 8.6e-10 68.9 74 48.6
MBI17_g25900_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.5e-09 68.2 99 37.4
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 5.6e-09 66.2 64 43.8
MBI17_g33124_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 8.0e-08 62.4 110 34.5
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 2.3e-07 60.8 53 50.9
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 4.0e-07 60.1 54 51.9
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 3.4e-06 57.0 54 53.7
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 9.8e-06 55.5 53 54.7


User provided reference genes

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