Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO334G0101 Selaginella moellendorffii HOM05D006958 ORTHO05D008814 7.9e-129 463.8 231 100.0
Actinidia10201 Actinidia chinensis HOM05D006958 ORTHO05D008814 4.0e-40 169.1 263 39.2
Dinv39219 Davidia involucrata HOM05D006958 ORTHO05D008814 3.4e-39 166.0 266 38.3
Actinidia22696 Actinidia chinensis HOM05D006958 ORTHO05D008814 4.9e-38 162.2 263 36.9
Ciclev10001733m.g Citrus clementina HOM05D006958 ORTHO05D008814 8.4e-38 161.4 266 36.5
MBI16_g23890_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D008814 8.4e-38 161.4 261 38.7
Manes.18G046700 Manihot esculenta HOM05D006958 ORTHO05D008814 5.4e-37 158.7 261 37.5
HPP92_009523 Vanilla planifolia HOM05D006958 ORTHO05D008814 5.4e-37 158.7 256 39.1
Pp3c12_1620 Physcomitrium patens HOM05D006958 ORTHO05D008814 7.1e-37 158.3 245 38.0
ATR0739G011 Amborella trichopoda HOM05D006958 ORTHO05D008814 1.2e-36 157.5 255 36.9
Prupe.1G422600 Prunus persica HOM05D006958 ORTHO05D008814 1.2e-36 157.5 266 36.5
CSS0020437 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 2.7e-36 156.4 267 36.3
CSS0026693 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 2.7e-36 156.4 265 36.6
Rhsim06G0062400 Rhododendron simsii HOM05D006958 ORTHO05D008814 6.0e-36 155.2 265 37.4
Carub.0002s0585 Capsella rubella HOM05D006958 ORTHO05D008814 7.8e-36 154.8 261 36.4
Thecc.08G088500 Theobroma cacao HOM05D006958 ORTHO05D008814 3.9e-35 152.5 267 35.6
AT1G59600 Arabidopsis thaliana HOM05D006958 ORTHO05D008814 6.6e-35 151.8 261 34.9
arahy.Tifrunner.gnm1.ann1.JFD9T8 Arachis hypogaea HOM05D006958 ORTHO05D008814 6.6e-35 151.8 252 35.3
CANSAT25G3409 Cannabis sativa HOM05D006958 ORTHO05D008814 6.6e-35 151.8 260 36.5
Glyma.14G089018 Glycine max HOM05D006958 ORTHO05D008814 6.6e-35 151.8 242 37.6
TAR376G0445 Trochodendron aralioides HOM05D006958 ORTHO05D008814 6.6e-35 151.8 268 35.8
Gorai.009G220300 Gossypium raimondii HOM05D006958 ORTHO05D008814 8.7e-35 151.4 269 34.9
Nitab4.5_0002484g0050 Nicotiana tabacum HOM05D006958 ORTHO05D008814 1.1e-34 151.0 257 36.6
Atru.chr13.835 Acer truncatum HOM05D006958 ORTHO05D008814 1.9e-34 150.2 267 34.5
CARHR283790 Cardamine hirsuta HOM05D006958 ORTHO05D008814 2.5e-34 149.8 265 34.3
Ca_13215_v3 Cicer arietinum L. HOM05D006958 ORTHO05D008814 2.5e-34 149.8 248 34.7
Solyc04g077820.4 Solanum lycopersicum HOM05D006958 ORTHO05D008814 3.3e-34 149.4 257 35.8
Duzib093G1923 Durio zibethinus HOM05D006958 ORTHO05D008814 4.3e-34 149.1 267 34.8
PGR031G1511 Punica granatum HOM05D006958 ORTHO05D008814 4.3e-34 149.1 269 33.1
Cpa.g.sc142.28 Carica papaya HOM05D006958 ORTHO05D008814 5.6e-34 148.7 263 35.0
Thhalv10023590m.g Eutrema salsugineum HOM05D006958 ORTHO05D008814 5.6e-34 148.7 265 35.5
RcHm_v2.0_Chr6g0309651 Rosa chinensis HOM05D006958 ORTHO05D008814 5.6e-34 148.7 265 35.1
Gohir.A05G210300 Gossypium hirsutum HOM05D006958 ORTHO05D008814 7.3e-34 148.3 263 35.0
Potri.002G118300 Populus trichocarpa HOM05D006958 ORTHO05D008814 7.3e-34 148.3 262 35.5
AL2G17470 Arabidopsis lyrata HOM05D006958 ORTHO05D008814 9.6e-34 147.9 261 34.9
Migut.N02783 Erythranthe guttata HOM05D006958 ORTHO05D008814 1.3e-33 147.5 257 36.2
Nitab4.5_0004654g0020 Nicotiana tabacum HOM05D006958 ORTHO05D008814 1.3e-33 147.5 257 35.8
CAN.G724.27 Capsicum annuum HOM05D006958 ORTHO05D008814 1.6e-33 147.1 255 34.5
Gohir.D05G213600 Gossypium hirsutum HOM05D006958 ORTHO05D008814 1.6e-33 147.1 269 34.6
Lalb_Chr14g0368181 Lupinus albus HOM05D006958 ORTHO05D008814 1.6e-33 147.1 260 34.6
TWI12G1073 Tripterygium wilfordii HOM05D006958 ORTHO05D008814 1.6e-33 147.1 268 34.7
COL.COLO4_28503 Corchorus olitorius HOM05D006958 ORTHO05D008814 2.1e-33 146.7 269 34.9
THA.LOC104816754 Tarenaya hassleriana HOM05D006958 ORTHO05D008814 2.1e-33 146.7 268 35.1
Cfa013775 Carpinus fangiana HOM05D006958 ORTHO05D008814 2.8e-33 146.4 265 34.3
PSO675G0096 Papaver somniferum HOM05D006958 ORTHO05D008814 2.8e-33 146.4 275 36.0
Sopen04g031420 Solanum pennellii HOM05D006958 ORTHO05D008814 2.8e-33 146.4 257 35.4
MSTRG.24376 Avicennia marina HOM05D006958 ORTHO05D008814 3.6e-33 146.0 257 34.2
CDE04G0359 Ceratophyllum demersum HOM05D006958 ORTHO05D008814 6.2e-33 145.2 184 40.8
VMungo0647G0836 Vigna mungo HOM05D006958 ORTHO05D008814 6.2e-33 145.2 245 35.9
EL10Ac1g02379 Beta vulgaris HOM05D006958 ORTHO05D008814 8.1e-33 144.8 258 32.6
Sed0002112 Sechium edule HOM05D006958 ORTHO05D008814 8.1e-33 144.8 262 35.9
Sc02g0007890 Simmondsia chinensis HOM05D006958 ORTHO05D008814 8.1e-33 144.8 271 34.3
ECA246G2880 Erigeron canadensis HOM05D006958 ORTHO05D008814 1.1e-32 144.4 256 34.8
Haze_22433 Corylus avellana HOM05D006958 ORTHO05D008814 1.4e-32 144.1 265 34.0
FvH4_2g33060 Fragaria vesca HOM05D006958 ORTHO05D008814 1.4e-32 144.1 262 32.4
MD15G1069100 Malus domestica HOM05D006958 ORTHO05D008814 1.4e-32 144.1 265 35.1
HanXRQChr08g0229631 Helianthus annuus HOM05D006958 ORTHO05D008814 1.8e-32 143.7 261 34.5
PSO541G2153 Papaver somniferum HOM05D006958 ORTHO05D008814 1.8e-32 143.7 274 34.7
ClCG08G016520 Citrullus lanatus HOM05D006958 ORTHO05D008814 6.9e-32 141.7 266 36.8
FAN15G0662 Fragaria x ananassa HOM05D006958 ORTHO05D008814 9.0e-32 141.4 268 32.8
FAN27G0228 Fragaria x ananassa HOM05D006958 ORTHO05D008814 9.0e-32 141.4 268 32.8
Lsat_1_v5_gn_6_110920 Lactuca sativa HOM05D006958 ORTHO05D008814 9.0e-32 141.4 264 33.3
SGA_v2.0_scaffold28G11833 Striga asiatica HOM05D006958 ORTHO05D008814 9.0e-32 141.4 257 36.6
CiPaw.07G174600 Carya illinoinensis HOM05D006958 ORTHO05D008814 1.2e-31 141.0 268 33.6
Lj5g0000926 Lotus japonicus HOM05D006958 ORTHO05D008814 1.5e-31 140.6 248 33.9
Zm00001eb325900 Zea mays HOM05D006958 ORTHO05D008814 1.5e-31 140.6 268 35.4
FAN24G2490 Fragaria x ananassa HOM05D006958 ORTHO05D008814 2.0e-31 140.2 266 32.7
Phvul.001G028000 Phaseolus vulgaris HOM05D006958 ORTHO05D008814 2.6e-31 139.8 245 35.5
TPR.G37796 Trifolium pratense HOM05D006958 ORTHO05D008814 2.6e-31 139.8 252 36.1
Aa31LG2G10550 Aethionema arabicum HOM05D006958 ORTHO05D008814 3.4e-31 139.4 269 33.8
Eucgr.F02250 Eucalyptus grandis HOM05D006958 ORTHO05D008814 3.4e-31 139.4 270 31.9
C01p36350 Brassica napus HOM05D006958 ORTHO05D008814 9.9e-31 137.9 257 33.1
Sp2g04980 Schrenkiella parvula HOM05D006958 ORTHO05D008814 9.9e-31 137.9 266 32.3
arahy.Tifrunner.gnm1.ann1.8TQ0W2 Arachis hypogaea HOM05D006958 ORTHO05D008814 1.3e-30 137.5 240 34.2
Medtr1g018000 Medicago truncatula HOM05D006958 ORTHO05D008814 1.3e-30 137.5 251 33.1
MELO3C010802.2 Cucumis melo HOM05D006958 ORTHO05D008814 1.7e-30 137.1 264 35.2
GSVIVG01009341001 Vitis vinifera HOM05D006958 ORTHO05D008814 2.9e-30 136.3 149 44.3
FAN20G1263 Fragaria x ananassa HOM05D006958 ORTHO05D008814 4.9e-30 135.6 279 31.2
PGSC0003DMG400010608 Solanum tuberosum HOM05D006958 ORTHO05D008814 6.4e-30 135.2 270 34.1
CsaV3_2G026090 Cucumis sativus L. HOM05D006958 ORTHO05D008814 1.1e-29 134.4 264 34.5
BolC1t03593H Brassica oleracea HOM05D006958 ORTHO05D008814 1.9e-29 133.7 260 33.8
Aqoxy6G02602 Aquilegia oxysepala HOM05D006958 ORTHO05D008814 2.4e-29 133.3 268 32.5
A01p28700 Brassica napus HOM05D006958 ORTHO05D008814 7.1e-29 131.7 261 31.8
BraA01t03033Z Brassica rapa HOM05D006958 ORTHO05D008814 7.1e-29 131.7 261 31.8
QL12p038133 Quercus lobata HOM05D006958 ORTHO05D008814 2.1e-28 130.2 268 32.1
unitig_744.g24127 Utricularia gibba HOM05D006958 ORTHO05D008814 6.0e-28 128.6 258 33.7
Peaxi162Scf00081g02114 Petunia axillaris HOM05D006958 ORTHO05D008814 1.0e-27 127.9 251 31.9
Hund05299 Selenicereus undatus HOM05D006958 ORTHO05D008814 1.3e-27 127.5 271 31.4
PSO541G3524 Papaver somniferum HOM05D006958 ORTHO05D008814 5.1e-27 125.6 270 33.3
Cc10_g05800 Coffea canephora HOM05D006958 ORTHO05D008814 8.7e-27 124.8 147 41.5
CBR_g51257 Chara braunii HOM05D006958 ORTHO05D008814 2.5e-26 123.2 168 40.5
BcaB04g20216 Brassica carinata HOM05D006958 ORTHO05D008814 4.3e-26 122.5 242 31.4
DCAR_020049 Daucus carota HOM05D006958 ORTHO05D008814 6.2e-25 118.6 265 30.6
HPP92_009559 Vanilla planifolia HOM05D006958 ORTHO05D008814 1.4e-24 117.5 122 49.2
Lj4A758G77 Lonicera japonica HOM05D006958 ORTHO05D008814 7.6e-23 111.7 97 50.5
Os01g0593100 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 1.2e-12 77.8 91 39.6
BolC4t24190H Brassica oleracea HOM05D006958 ORTHO05D008814 1.1e-10 71.2 125 35.2
Cfa010280 Carpinus fangiana HOM05D006958 ORTHO05D008814 1.5e-10 70.9 91 39.6
Psat6g018160 Pisum sativum HOM05D006958 ORTHO05D008814 5.7e-10 68.9 77 45.5
C04p26140 Brassica napus HOM05D006958 ORTHO05D008814 9.7e-10 68.2 81 42.0
BcaC02g10644 Brassica carinata HOM05D006958 ORTHO05D008814 1.6e-09 67.4 77 41.6
SEGI_26692 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 3.7e-09 66.2 58 55.2
SEGI_02529 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 9.0e-08 61.6 150 28.0
MBI15_g25904_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D017181 3.4e-07 59.7 64 45.3


User provided reference genes

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