Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO331G0083 Selaginella moellendorffii HOM05D006424 ORTHO05D007945 9.9e-140 500.0 231 100.0
Pp3c9_11540 Physcomitrium patens HOM05D006424 ORTHO05D007945 2.7e-76 289.3 215 60.0
Mapoly0024s0088 Marchantia polymorpha HOM05D006424 ORTHO05D007945 6.8e-72 274.6 205 59.0
CBR_g38381 Chara braunii HOM05D006424 ORTHO05D007945 3.7e-70 268.9 208 57.2
FAN14G0356 Fragaria x ananassa HOM05D006424 ORTHO05D007945 1.9e-69 266.5 214 57.0
Pp3c22_2660 Physcomitrium patens HOM05D006424 ORTHO05D007945 1.9e-69 266.5 204 56.4
Ca_20445_v3 Cicer arietinum L. HOM05D006424 ORTHO05D007945 4.1e-69 265.4 215 55.3
FAN05G3690 Fragaria x ananassa HOM05D006424 ORTHO05D007945 4.1e-69 265.4 214 56.5
RcHm_v2.0_Chr2g0135411 Rosa chinensis HOM05D006424 ORTHO05D007945 7.0e-69 264.6 200 59.0
TPR.G38617 Trifolium pratense HOM05D001630 ORTHO05D007945 1.6e-68 263.5 204 54.9
Lalb_Chr04g0262371 Lupinus albus HOM05D006424 ORTHO05D007945 4.6e-68 261.9 204 54.9
CANSAT56G3050 Cannabis sativa HOM05D006424 ORTHO05D007945 7.8e-68 261.2 204 58.3
Ciclev10026222m.g Citrus clementina HOM05D006424 ORTHO05D007945 1.0e-67 260.8 204 55.9
AagrBONN_evm.TU.Sc2ySwM_344.5484 Anthoceros agrestis HOM05D006424 ORTHO05D007945 1.3e-67 260.4 202 56.4
AUR62016338 Chenopodium quinoa HOM05D006424 ORTHO05D007945 1.3e-67 260.4 210 54.3
FAN02G1519 Fragaria x ananassa HOM05D006424 ORTHO05D007945 1.3e-67 260.4 214 55.6
Lj9A500T81 Lonicera japonica HOM05D006424 ORTHO05D007945 1.3e-67 260.4 213 52.1
Ah.01g020600 Amaranthus hybridus HOM05D006424 ORTHO05D007945 2.3e-67 259.6 209 55.5
PGR102G1391 Punica granatum HOM05D006424 ORTHO05D007945 3.9e-67 258.8 210 54.8
Manes.11G056800 Manihot esculenta HOM05D006424 ORTHO05D007945 6.6e-67 258.1 222 51.8
Nitab4.5_0009497g0010 Nicotiana tabacum HOM05D006424 ORTHO05D007945 6.6e-67 258.1 204 53.9
PGSC0003DMG402028626 Solanum tuberosum HOM05D006424 ORTHO05D007945 6.6e-67 258.1 211 53.6
Actinidia08796 Actinidia chinensis HOM05D006424 ORTHO05D007945 8.6e-67 257.7 204 54.9
Oeu039429.1 Olea europaea HOM05D006424 ORTHO05D007945 8.6e-67 257.7 205 54.6
QL05p029818 Quercus lobata HOM05D006424 ORTHO05D007945 1.1e-66 257.3 201 55.7
unitig_27.g24949 Utricularia gibba HOM05D006424 ORTHO05D007945 1.1e-66 257.3 198 57.1
Medtr4g010140 Medicago truncatula HOM05D006424 ORTHO05D007945 3.3e-66 255.8 204 53.9
A03p39490 Brassica napus HOM05D006424 ORTHO05D007945 4.3e-66 255.4 204 54.9
BraA03t13099Z Brassica rapa HOM05D006424 ORTHO05D007945 5.6e-66 255.0 204 54.9
Eucgr.F03876 Eucalyptus grandis HOM05D006424 ORTHO05D007945 5.6e-66 255.0 215 54.0
CSS0015595 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 7.3e-66 254.6 205 53.7
BcaB06g25691 Brassica carinata HOM05D006424 ORTHO05D007945 9.5e-66 254.2 204 54.4
CAN.G47.13 Capsicum annuum HOM05D006424 ORTHO05D007945 9.5e-66 254.2 202 54.5
AUR62011520 Chenopodium quinoa HOM05D006424 ORTHO05D007945 1.2e-65 253.8 213 51.6
Gohir.D06G192200 Gossypium hirsutum HOM05D006424 ORTHO05D007945 1.2e-65 253.8 211 54.0
Gorai.010G225400 Gossypium raimondii HOM05D006424 ORTHO05D007945 1.2e-65 253.8 211 54.0
Aqoxy7G03662 Aquilegia oxysepala HOM05D006424 ORTHO05D007945 1.6e-65 253.4 208 52.4
Gohir.A06G185600 Gossypium hirsutum HOM05D006424 ORTHO05D007945 1.6e-65 253.4 204 54.4
MD17G1212100 Malus domestica HOM05D006424 ORTHO05D007945 1.6e-65 253.4 201 55.7
GSVIVG01017340001 Vitis vinifera HOM05D006424 ORTHO05D007945 1.6e-65 253.4 198 56.6
Actinidia15982 Actinidia chinensis HOM05D006424 ORTHO05D007945 2.1e-65 253.1 198 56.1
BcaC05g28929 Brassica carinata HOM05D006424 ORTHO05D007945 2.1e-65 253.1 204 54.4
A05p33570 Brassica napus HOM05D006424 ORTHO05D007945 2.1e-65 253.1 204 54.4
C05p50560 Brassica napus HOM05D006424 ORTHO05D007945 2.1e-65 253.1 204 54.4
BolC5t33801H Brassica oleracea HOM05D006424 ORTHO05D007945 2.1e-65 253.1 204 54.4
DCAR_021344 Daucus carota HOM05D006424 ORTHO05D007945 2.1e-65 253.1 209 52.2
FvH4_6g29710 Fragaria vesca HOM05D006424 ORTHO05D007945 2.1e-65 253.1 193 59.1
Hma1.2p1_0042F.1_g025600 Hydrangea macrophylla HOM05D006424 ORTHO05D007945 2.1e-65 253.1 204 52.5
BraA05t22180Z Brassica rapa HOM05D006424 ORTHO05D007945 2.8e-65 252.7 204 54.4
CsaV3_7G032330 Cucumis sativus L. HOM05D006424 ORTHO05D007945 2.8e-65 252.7 198 56.1
Migut.I00764 Erythranthe guttata HOM05D006424 ORTHO05D007945 2.8e-65 252.7 204 53.4
Sopen12g021950 Solanum pennellii HOM05D006424 ORTHO05D007945 2.8e-65 252.7 204 53.9
MSTRG.22746 Avicennia marina HOM05D006424 ORTHO05D007945 3.6e-65 252.3 204 53.4
CiPaw.01G248200 Carya illinoinensis HOM05D006424 ORTHO05D007945 3.6e-65 252.3 204 55.9
MELO3C023426.2 Cucumis melo HOM05D006424 ORTHO05D007945 3.6e-65 252.3 198 56.1
Solyc12g042770.3 Solanum lycopersicum HOM05D006424 ORTHO05D007945 4.7e-65 251.9 204 53.9
CARHR090930 Cardamine hirsuta HOM05D006424 ORTHO05D007945 6.2e-65 251.5 204 54.4
CiPaw.02G157300 Carya illinoinensis HOM05D006424 ORTHO05D007945 6.2e-65 251.5 204 54.9
Nn2g12084 Nelumbo nucifera HOM05D006424 ORTHO05D007945 6.2e-65 251.5 203 52.7
Aa31LG8G3030 Aethionema arabicum HOM05D006424 ORTHO05D007945 8.0e-65 251.1 204 53.4
BcaC01g03854 Brassica carinata HOM05D006424 ORTHO05D007945 8.0e-65 251.1 198 55.6
C03p47890 Brassica napus HOM05D006424 ORTHO05D007945 8.0e-65 251.1 204 53.9
Prupe.3G087300 Prunus persica HOM05D006424 ORTHO05D007945 8.0e-65 251.1 200 56.0
ATR0322G065 Amborella trichopoda HOM05D006424 ORTHO05D007945 1.1e-64 250.8 200 55.0
Cpa.g.sc10.267 Carica papaya HOM05D006424 ORTHO05D007945 1.1e-64 250.8 201 56.2
MBI04_g29330_MAGBIO Magnolia biondii HOM05D006424 ORTHO05D007945 1.1e-64 250.8 208 53.4
Atru.chr1.2950 Acer truncatum HOM05D006424 ORTHO05D007945 1.4e-64 250.4 203 55.2
COL.COLO4_11949 Corchorus olitorius HOM05D006424 ORTHO05D007945 1.4e-64 250.4 201 53.7
Lsat_1_v5_gn_1_34401 Lactuca sativa HOM05D006424 ORTHO05D007945 1.4e-64 250.4 212 51.9
Peaxi162Scf00034g01413 Petunia axillaris HOM05D006424 ORTHO05D007945 1.4e-64 250.4 211 52.1
Sed0012965 Sechium edule HOM05D006424 ORTHO05D007945 1.4e-64 250.4 206 53.9
THA.LOC104810510 Tarenaya hassleriana HOM05D006424 ORTHO05D007945 1.4e-64 250.4 221 50.7
CSS0035863 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 1.8e-64 250.0 216 52.3
ClCG09G002940 Citrullus lanatus HOM05D006424 ORTHO05D007945 1.8e-64 250.0 198 55.6
HanXRQChr04g0097881 Helianthus annuus HOM05D006424 ORTHO05D007945 1.8e-64 250.0 204 52.5
Lj3g0018478 Lotus japonicus HOM05D006424 ORTHO05D007945 1.8e-64 250.0 204 54.4
Sp3g14150 Schrenkiella parvula HOM05D006424 ORTHO05D007945 1.8e-64 250.0 201 54.7
vmacro16897 Vaccinium macrocarpon HOM05D006424 ORTHO05D007945 2.3e-64 249.6 215 53.5
Duzib192G0907 Durio zibethinus HOM05D006424 ORTHO05D007945 3.1e-64 249.2 204 52.9
Carub.0003s1558 Capsella rubella HOM05D006424 ORTHO05D007945 4.0e-64 248.8 204 54.4
Cfa001961 Carpinus fangiana HOM05D006424 ORTHO05D007945 4.0e-64 248.8 211 53.6
Rhsim12G0191200 Rhododendron simsii HOM05D006424 ORTHO05D007945 4.0e-64 248.8 204 53.4
Zm00001eb049190 Zea mays HOM05D006424 ORTHO05D007945 4.0e-64 248.8 205 53.2
AL3G28500 Arabidopsis lyrata HOM05D006424 ORTHO05D007945 6.8e-64 248.1 204 54.4
Sabra01G0157400 Salix brachista HOM05D006424 ORTHO05D007945 6.8e-64 248.1 204 54.4
TWI12G0141 Tripterygium wilfordii HOM05D006424 ORTHO05D007945 6.8e-64 248.1 199 55.3
VMungo0331G1912 Vigna mungo HOM05D006424 ORTHO05D007945 6.8e-64 248.1 215 51.6
Cc04_g04390 Coffea canephora HOM05D006424 ORTHO05D007945 8.9e-64 247.7 201 53.2
Thhalv10022443m.g Eutrema salsugineum HOM05D006424 ORTHO05D007945 8.9e-64 247.7 204 53.9
Nn8g39504 Nelumbo nucifera HOM05D006424 ORTHO05D007945 1.2e-63 247.3 203 51.2
AT3G15840 Arabidopsis thaliana HOM05D006424 ORTHO05D007945 2.0e-63 246.5 204 53.4
Phvul.010G156300 Phaseolus vulgaris HOM05D006424 ORTHO05D007945 2.0e-63 246.5 215 51.2
Potri.001G204300 Populus trichocarpa HOM05D006424 ORTHO05D007945 2.0e-63 246.5 204 53.4
Glyma.07G029900 Glycine max HOM05D006424 ORTHO05D007945 3.4e-63 245.7 203 52.7
Os03g0586500 Oryza sativa ssp. japonica HOM05D006424 ORTHO05D007945 3.4e-63 245.7 205 53.2
Thecc.06G024200 Theobroma cacao HOM05D006424 ORTHO05D007945 3.4e-63 245.7 203 51.7
TAR383G1051 Trochodendron aralioides HOM05D006424 ORTHO05D007945 5.8e-63 245.0 198 53.5
Manes.04G112700 Manihot esculenta HOM05D006424 ORTHO05D007945 9.8e-63 244.2 203 52.2
PSO210G3245 Papaver somniferum HOM05D006424 ORTHO05D007945 9.8e-63 244.2 210 52.9
ECA247G2617 Erigeron canadensis HOM05D006424 ORTHO05D007945 1.3e-62 243.8 198 53.0
Glyma.08G213000 Glycine max HOM05D006424 ORTHO05D007945 1.3e-62 243.8 215 51.6
Zm00001eb219530 Zea mays HOM05D006424 ORTHO05D007945 1.3e-62 243.8 205 53.2
PSO210G5365 Papaver somniferum HOM05D006424 ORTHO05D007945 2.9e-62 242.7 211 51.7
BolC3t17067H Brassica oleracea HOM05D006424 ORTHO05D007945 3.7e-62 242.3 230 48.7
CDE07G1654 Ceratophyllum demersum HOM05D006424 ORTHO05D007945 1.4e-61 240.4 202 53.5
FAN09G3401 Fragaria x ananassa HOM05D006424 ORTHO05D007945 7.0e-61 238.0 232 50.9
arahy.Tifrunner.gnm1.ann1.92ZGJC Arachis hypogaea HOM05D006424 ORTHO05D007945 1.7e-59 233.4 204 52.5
Haze_16559 Corylus avellana HOM05D006424 ORTHO05D007945 3.9e-59 232.3 225 48.0
Nitab4.5_0003157g0020 Nicotiana tabacum HOM05D006424 ORTHO05D007945 9.5e-58 227.6 204 49.0
Pp3c15_11500 Physcomitrium patens HOM05D006424 ORTHO05D007945 3.1e-56 222.6 157 60.5
SalBow2G1302 Salvia bowleyana HOM05D006424 ORTHO05D007945 1.3e-51 207.2 204 49.0
Sed0007474 Sechium edule HOM05D006424 ORTHO05D007945 7.8e-44 181.4 127 58.3
SEGI_16074 Sequoiadendron giganteum HOM05D006424 ORTHO05D007945 1.7e-43 180.3 133 57.1
Dinv38123 Davidia involucrata HOM05D006424 ORTHO05D007945 1.9e-42 176.8 143 51.7
Thecc.06G024600 Theobroma cacao HOM05D006424 ORTHO05D007945 2.1e-41 173.3 133 52.6
Thecc.K0004600 Theobroma cacao HOM05D006424 ORTHO05D007945 4.2e-37 159.1 139 50.4
Hund06560 Selenicereus undatus HOM05D006424 ORTHO05D007945 6.6e-35 151.8 162 45.7
arahy.Tifrunner.gnm1.ann1.7R86JN Arachis hypogaea HOM05D006424 ORTHO05D007945 6.4e-30 135.2 204 38.7
EL10Ac9g21901 Beta vulgaris HOM05D006424 ORTHO05D007945 6.7e-27 125.2 95 53.7
Psat7g257120 Pisum sativum HOM05D006424 ORTHO05D007945 1.9e-26 123.6 98 54.1
QL05p029868 Quercus lobata HOM05D006424 ORTHO05D007945 3.9e-19 99.4 74 54.1
QL05p029832 Quercus lobata HOM05D006424 ORTHO05D007945 2.1e-12 77.0 55 54.5
arahy.Tifrunner.gnm1.ann1.ZYH6JG Arachis hypogaea HOM05D006424 ORTHO05D007945 2.8e-09 66.6 54 55.6
Oeu000425.1 Olea europaea HOM05D006424 ORTHO05D007945 5.3e-08 62.4 112 29.5
arahy.Tifrunner.gnm1.ann1.YP381G Arachis hypogaea HOM05D006424 ORTHO05D007945 5.0e-06 55.8 38 57.9


User provided reference genes

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