Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO331G0045 Selaginella moellendorffii HOM05D005414 ORTHO05D006844 2.8e-58 228.4 116 100.0
Pp3c21_15140 Physcomitrium patens HOM05D005414 ORTHO05D006844 1.8e-28 129.4 109 56.0
Zm00001eb385480 Zea mays HOM05D005414 ORTHO05D006844 3.7e-26 121.7 103 59.2
RcHm_v2.0_Chr6g0273701 Rosa chinensis HOM05D005414 ORTHO05D006844 6.3e-26 120.9 111 52.3
Lalb_Chr02g0141631 Lupinus albus HOM05D005414 ORTHO05D006844 1.4e-25 119.8 111 54.1
Phvul.007G085100 Phaseolus vulgaris HOM05D005414 ORTHO05D006844 1.4e-25 119.8 108 52.8
TPR.G17052 Trifolium pratense HOM05D005414 ORTHO05D006844 1.4e-25 119.8 111 53.2
Eucgr.F02672 Eucalyptus grandis HOM05D005414 ORTHO05D006844 4.1e-25 118.2 104 52.9
Potri.002G062600 Populus trichocarpa HOM05D005414 ORTHO05D006844 5.3e-25 117.9 109 52.3
Actinidia17760 Actinidia chinensis HOM05D005414 ORTHO05D006844 7.0e-25 117.5 103 55.3
AagrBONN_evm.TU.Sc2ySwM_228.1176 Anthoceros agrestis HOM05D005414 ORTHO05D006844 7.0e-25 117.5 109 52.3
VMungo0720G1060 Vigna mungo HOM05D005414 ORTHO05D006844 7.0e-25 117.5 111 50.5
Atru.chr13.1979 Acer truncatum HOM05D005414 ORTHO05D006844 9.1e-25 117.1 103 56.3
Glyma.20G171300 Glycine max HOM05D005414 ORTHO05D006844 9.1e-25 117.1 111 49.5
Medtr1g097430 Medicago truncatula HOM05D005414 ORTHO05D006844 1.2e-24 116.7 108 53.7
GSVIVG01013697001 Vitis vinifera HOM05D005414 ORTHO05D006844 1.2e-24 116.7 103 53.4
SEGI_39181 Sequoiadendron giganteum HOM05D005414 ORTHO05D006844 1.6e-24 116.3 105 51.4
Os06g0581300 Oryza sativa ssp. japonica HOM05D005414 ORTHO05D006844 2.0e-24 115.9 108 50.9
Psat6g189560 Pisum sativum HOM05D005414 ORTHO05D006844 2.0e-24 115.9 108 51.9
FAN27G1467 Fragaria x ananassa HOM05D005414 ORTHO05D006844 2.6e-24 115.5 111 51.4
FvH4_2g12810 Fragaria vesca HOM05D005414 ORTHO05D006844 4.5e-24 114.8 111 51.4
Sabra05G0151200 Salix brachista HOM05D005414 ORTHO05D006844 4.5e-24 114.8 106 53.8
arahy.Tifrunner.gnm1.ann1.X1PAW1 Arachis hypogaea HOM05D005414 ORTHO05D006844 5.9e-24 114.4 108 54.6
Mapoly0067s0091 Marchantia polymorpha HOM05D005414 ORTHO05D006844 5.9e-24 114.4 109 48.6
Cc10_g06420 Coffea canephora HOM05D005414 ORTHO05D006844 7.7e-24 114.0 102 54.9
Phvul.007G085000 Phaseolus vulgaris HOM05D005414 ORTHO05D006844 7.7e-24 114.0 111 50.5
HPP92_008789 Vanilla planifolia HOM05D005414 ORTHO05D006844 7.7e-24 114.0 99 52.5
CiPaw.16G007400 Carya illinoinensis HOM05D005414 ORTHO05D006844 1.0e-23 113.6 103 52.4
PSO170G2436 Papaver somniferum HOM05D005414 ORTHO05D006844 1.0e-23 113.6 103 53.4
Ciclev10002272m.g Citrus clementina HOM05D005414 ORTHO05D006844 1.3e-23 113.2 107 51.4
FAN24G1739 Fragaria x ananassa HOM05D005414 ORTHO05D006844 1.3e-23 113.2 108 51.9
Potri.005G198600 Populus trichocarpa HOM05D005414 ORTHO05D006844 1.3e-23 113.2 106 51.9
CSS0025663 Camellia sinensis var. sinensis HOM05D005414 ORTHO05D006844 1.7e-23 112.8 103 56.3
SGA_v2.0_scaffold188G40302 Striga asiatica HOM05D005414 ORTHO05D006844 1.7e-23 112.8 112 51.8
CSS0029717 Camellia sinensis var. sinensis HOM05D005414 ORTHO05D006844 2.2e-23 112.5 103 55.3
TAR628G0132 Trochodendron aralioides HOM05D005414 ORTHO05D000799 2.2e-23 112.5 103 54.4
arahy.Tifrunner.gnm1.ann1.66PYZ2 Arachis hypogaea HOM05D005414 ORTHO05D006844 2.9e-23 112.1 108 53.7
Aqoxy5G02011 Aquilegia oxysepala HOM05D005414 ORTHO05D006844 3.8e-23 111.7 108 49.1
Lj5g0014662 Lotus japonicus HOM05D005414 ORTHO05D006844 3.8e-23 111.7 111 49.5
Duzib041G0057 Durio zibethinus HOM05D005414 ORTHO05D006844 5.0e-23 111.3 108 50.9
MBI04_g42207_MAGBIO Magnolia biondii HOM05D005414 ORTHO05D006844 5.0e-23 111.3 103 52.4
PSO210G6322 Papaver somniferum HOM05D005414 ORTHO05D006844 6.5e-23 110.9 103 51.5
Rhsim06G0093200 Rhododendron simsii HOM05D005414 ORTHO05D006844 6.5e-23 110.9 105 52.4
MD10G1038100 Malus domestica HOM05D005414 ORTHO05D006844 8.5e-23 110.5 105 51.4
ATR1120G143 Amborella trichopoda HOM05D005414 ORTHO05D006844 1.1e-22 110.2 114 50.0
DCAR_009609 Daucus carota HOM05D005414 ORTHO05D006844 1.5e-22 109.8 108 52.8
Prupe.8G044100 Prunus persica HOM05D005414 ORTHO05D006844 1.5e-22 109.8 105 50.5
PGR042G0638 Punica granatum HOM05D005414 ORTHO05D006844 1.5e-22 109.8 103 49.5
SalBow7G3693 Salvia bowleyana HOM05D005414 ORTHO05D006844 1.9e-22 109.4 104 50.0
Gorai.010G131400 Gossypium raimondii HOM05D005414 ORTHO05D006844 2.5e-22 109.0 106 50.9
Migut.C00158 Erythranthe guttata HOM05D005414 ORTHO05D006844 3.2e-22 108.6 104 49.0
CANSAT25G0738 Cannabis sativa HOM05D005414 ORTHO05D006844 4.2e-22 108.2 111 48.6
CDE05G3275 Ceratophyllum demersum HOM05D005414 ORTHO05D006844 4.2e-22 108.2 108 47.2
Gohir.A06G116400 Gossypium hirsutum HOM05D005414 ORTHO05D006844 4.2e-22 108.2 117 48.7
Nn5g28873 Nelumbo nucifera HOM05D005414 ORTHO05D000799 5.5e-22 107.8 103 52.4
CAN.G564.21 Capsicum annuum HOM05D005414 ORTHO05D006844 1.6e-21 106.3 105 45.7
Glyma.20G171400 Glycine max HOM05D005414 ORTHO05D006844 1.6e-21 106.3 111 45.9
Nitab4.5_0001000g0190 Nicotiana tabacum HOM05D005414 ORTHO05D006844 1.6e-21 106.3 103 49.5
Oeu061453.3 Olea europaea HOM05D005414 ORTHO05D006844 1.6e-21 106.3 112 50.0
Peaxi162Scf00226g00114 Petunia axillaris HOM05D005414 ORTHO05D006844 1.6e-21 106.3 104 50.0
HanXRQChr05g0144171 Helianthus annuus HOM05D005414 ORTHO05D006844 2.1e-21 105.9 105 50.5
PGSC0003DMG400031145 Solanum tuberosum HOM05D005414 ORTHO05D006844 2.1e-21 105.9 104 45.2
Nitab4.5_0007691g0020 Nicotiana tabacum HOM05D005414 ORTHO05D006844 3.6e-21 105.1 103 48.5
Thecc.08G163500 Theobroma cacao HOM05D005414 ORTHO05D006844 3.6e-21 105.1 103 50.5
vmacro21198 Vaccinium macrocarpon HOM05D005414 ORTHO05D006844 3.6e-21 105.1 105 49.5
Solyc04g072031.1 Solanum lycopersicum HOM05D005414 ORTHO05D006844 4.7e-21 104.8 104 45.2
Solyc04g072050.4 Solanum lycopersicum HOM05D005414 ORTHO05D006844 4.7e-21 104.8 104 45.2
Sopen04g028220 Solanum pennellii HOM05D005414 ORTHO05D006844 4.7e-21 104.8 104 45.2
CDE05G1245 Ceratophyllum demersum HOM05D005414 ORTHO05D006844 6.1e-21 104.4 103 47.6
MSTRG.24938 Avicennia marina HOM05D005414 ORTHO05D006844 8.0e-21 104.0 104 49.0
Gohir.D06G114900 Gossypium hirsutum HOM05D005414 ORTHO05D006844 8.0e-21 104.0 111 47.7
Sabra02G0050500 Salix brachista HOM05D005414 ORTHO05D006844 1.4e-20 103.2 106 47.2
Manes.18G096200 Manihot esculenta HOM05D005414 ORTHO05D006844 1.8e-20 102.8 107 49.5
unitig_32.g11168 Utricularia gibba HOM05D005414 ORTHO05D006844 2.3e-20 102.4 103 44.7
Sc26g0002600 Simmondsia chinensis HOM05D005414 ORTHO05D006844 3.0e-20 102.1 106 49.1
Hma1.2p1_2282F.1_g318850 Hydrangea macrophylla HOM05D005414 ORTHO05D006844 4.0e-20 101.7 103 49.5
ECA232G1443 Erigeron canadensis HOM05D005414 ORTHO05D006844 6.8e-20 100.9 105 50.5
TWI60G0913 Tripterygium wilfordii HOM05D005414 ORTHO05D006844 1.2e-19 100.1 100 53.0
BcaNung07190 Brassica carinata HOM05D005414 ORTHO05D006844 4.4e-19 98.2 105 47.6
BcaNung07397 Brassica carinata HOM05D005414 ORTHO05D006844 4.4e-19 98.2 105 47.6
A09p41990 Brassica napus HOM05D005414 ORTHO05D006844 4.4e-19 98.2 105 47.6
C05p21870 Brassica napus HOM05D005414 ORTHO05D006844 4.4e-19 98.2 105 47.6
BolC5t30882H Brassica oleracea HOM05D005414 ORTHO05D006844 4.4e-19 98.2 105 47.6
BraA09t39686Z Brassica rapa HOM05D005414 ORTHO05D006844 4.4e-19 98.2 105 47.6
Thhalv10008541m.g Eutrema salsugineum HOM05D005414 ORTHO05D006844 2.8e-18 95.5 103 48.5
Sp1g20260 Schrenkiella parvula HOM05D005414 ORTHO05D006844 2.8e-18 95.5 105 46.7
AT1G22750 Arabidopsis thaliana HOM05D005414 ORTHO05D006844 3.7e-18 95.1 103 47.6
Lsat_1_v5_gn_9_42481 Lactuca sativa HOM05D005414 ORTHO05D006844 4.8e-18 94.7 99 48.5
Sopen04g028200 Solanum pennellii HOM05D005414 ORTHO05D006844 4.8e-18 94.7 104 41.3
AL1G36290 Arabidopsis lyrata HOM05D005414 ORTHO05D006844 1.1e-17 93.6 103 47.6
ClCG08G007190 Citrullus lanatus HOM05D005414 ORTHO05D006844 1.1e-17 93.6 105 41.0
Hund26672 Selenicereus undatus HOM05D005414 ORTHO05D006844 1.4e-17 93.2 107 43.9
Aa31LG7G6700 Aethionema arabicum HOM05D005414 ORTHO05D006844 2.4e-17 92.4 103 43.7
QL02p036452 Quercus lobata HOM05D005414 ORTHO05D006844 2.4e-17 92.4 99 52.5
QL02p036925 Quercus lobata HOM05D005414 ORTHO05D006844 2.4e-17 92.4 99 52.5
Sed0023257 Sechium edule HOM05D005414 ORTHO05D006844 2.4e-17 92.4 107 43.9
Carub.0001s2226 Capsella rubella HOM05D005414 ORTHO05D006844 7.0e-17 90.9 103 45.6
THA.LOC104809748 Tarenaya hassleriana HOM05D005414 ORTHO05D006844 7.7e-16 87.4 103 41.7
CsaV3_6G004870 Cucumis sativus L. HOM05D005414 ORTHO05D006844 3.8e-15 85.1 109 43.1
MELO3C030042.2 Cucumis melo HOM05D005414 ORTHO05D006844 5.0e-15 84.7 109 44.0
EL10Ac1g01628 Beta vulgaris HOM05D005414 ORTHO05D006844 1.1e-14 83.6 137 36.5
FAN15G1775 Fragaria x ananassa HOM05D005414 ORTHO05D006844 1.1e-14 83.6 138 37.7
HanXRQChr11g0320141 Helianthus annuus HOM05D005414 ORTHO05D006844 1.5e-14 83.2 106 38.7
CsaV3_6G004860 Cucumis sativus L. HOM05D005414 ORTHO05D006844 3.2e-14 82.0 109 39.4
CBR_g58808 Chara braunii HOM05D005414 ORTHO05D006844 5.5e-14 81.3 108 43.5
HanXRQChr11g0320151 Helianthus annuus HOM05D005414 ORTHO05D006844 1.2e-13 80.1 109 38.5
CAN.G564.22 Capsicum annuum HOM05D005414 ORTHO05D006844 2.7e-13 79.0 104 37.5
MELO3C019962.2 Cucumis melo HOM05D005414 ORTHO05D006844 3.6e-13 78.6 109 38.5
ECA232G3911 Erigeron canadensis HOM05D005414 ORTHO05D006844 3.6e-13 78.6 104 36.5
CARHR023110 Cardamine hirsuta HOM05D005414 ORTHO05D006844 1.4e-12 76.6 104 39.4
HanXRQChr11g0320131 Helianthus annuus HOM05D005414 ORTHO05D006844 1.4e-12 76.6 102 36.3
HanXRQChr07g0196141 Helianthus annuus HOM05D005414 ORTHO05D006844 1.8e-12 76.3 105 39.0
Cpa.g.sc26.122 Carica papaya HOM05D005414 ORTHO05D006844 2.3e-12 75.9 102 42.2
HanXRQChr11g0320121 Helianthus annuus HOM05D005414 ORTHO05D006844 4.0e-12 75.1 110 37.3
ECA232G0081 Erigeron canadensis HOM05D005414 ORTHO05D006844 2.0e-11 72.8 104 32.7
Lsat_1_v5_gn_9_42501 Lactuca sativa HOM05D005414 ORTHO05D006844 4.4e-11 71.6 104 34.6
HanXRQChr15g0485041 Helianthus annuus HOM05D005414 ORTHO05D006844 4.1e-09 65.1 116 35.3
HanXRQChr15g0484681 Helianthus annuus HOM05D005414 ORTHO05D006844 5.4e-09 64.7 117 35.0
HanXRQChr15g0484961 Helianthus annuus HOM05D005414 ORTHO05D006844 3.5e-08 62.0 111 36.0
Lsat_1_v5_gn_4_170780 Lactuca sativa HOM05D005414 ORTHO05D006844 5.9e-08 61.2 117 31.6
Sed0017348 Sechium edule HOM05D005414 ORTHO05D006844 7.7e-08 60.8 100 34.0
AUR62032103 Chenopodium quinoa HOM05D005414 ORTHO05D006844 1.1e-06 57.0 52 51.9
Lsat_1_v5_gn_1_83841 Lactuca sativa HOM05D005414 ORTHO05D006844 1.5e-06 56.6 108 31.5
Pp3c18_14820 Physcomitrium patens HOM05D005414 ORTHO05D006844 5.5e-06 54.7 42 54.8
Lsat_1_v5_gn_1_117841 Lactuca sativa HOM05D001315 ORTHO05D004199 9.5e-06 53.9 89 33.7


User provided reference genes

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