Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO331G0031 Selaginella moellendorffii HOM05D004011 ORTHO05D023129 4.7e-151 537.7 255 100.0
SMO110G0005 Selaginella moellendorffii HOM05D004011 ORTHO05D023129 4.5e-109 398.3 259 79.5
SMO252G0024 Selaginella moellendorffii HOM05D004011 ORTHO05D023129 1.8e-78 296.6 306 57.5
SMO203G0050 Selaginella moellendorffii HOM05D004011 ORTHO05D023129 1.0e-76 290.8 175 82.9
SMO331G0064 Selaginella moellendorffii HOM05D004739 ORTHO05D005784 4.3e-67 258.8 118 100.0
SMO331G0015 Selaginella moellendorffii HOM05D004011 ORTHO05D023129 1.2e-64 250.8 118 97.5
SMO331G0061 Selaginella moellendorffii HOM05D004011 ORTHO05D023129 9.6e-43 177.9 161 59.6
SMO110G0012 Selaginella moellendorffii HOM05D004739 ORTHO05D005784 5.4e-30 135.6 195 45.6
SMO331G0048 Selaginella moellendorffii HOM05D004011 ORTHO05D005290 3.3e-27 126.3 193 43.5
SMO331G0054 Selaginella moellendorffii HOM05D004011 ORTHO05D378856 6.0e-13 79.0 56 78.6
SMO331G0089 Selaginella moellendorffii HOM05D004739 ORTHO05D005784 5.7e-11 72.4 79 60.8
SMO203G0018 Selaginella moellendorffii HOM05D004739 ORTHO05D005784 3.7e-10 69.7 80 58.8
SMO327G0027 Selaginella moellendorffii HOM05D004739 ORTHO05D005784 3.7e-10 69.7 80 58.8
SMO331G0063 Selaginella moellendorffii HOM05D004739 ORTHO05D005784 3.7e-10 69.7 80 58.8
Aqoxy3G03233 Aquilegia oxysepala HOM05D004011 ORTHO05D005290 1.4e-09 67.8 118 33.9
PGSC0003DMG400022621 Solanum tuberosum HOM05D004011 ORTHO05D005290 1.4e-09 67.8 154 29.9
BcaB03g14114 Brassica carinata HOM05D004011 ORTHO05D005290 4.1e-09 66.2 78 42.3
Pp3c17_17430 Physcomitrium patens HOM05D004011 ORTHO05D005290 6.9e-09 65.5 105 36.2
SMO331G0087 Selaginella moellendorffii HOM05D004739 ORTHO05D005784 9.0e-09 65.1 80 56.2
SGA_v2.0_scaffold166G38295 Striga asiatica HOM05D004011 ORTHO05D005290 9.0e-09 65.1 105 36.2
CANSAT01G0183 Cannabis sativa HOM05D004011 ORTHO05D005290 1.5e-08 64.3 103 30.1
Cc11_g13670 Coffea canephora HOM05D004011 ORTHO05D005290 1.5e-08 64.3 80 37.5
arahy.Tifrunner.gnm1.ann1.NNWV08 Arachis hypogaea HOM05D004011 ORTHO05D005290 2.0e-08 63.9 146 30.8
SMO252G0014 Selaginella moellendorffii HOM05D004739 ORTHO05D005784 2.0e-08 63.9 80 55.0
SMO327G0004 Selaginella moellendorffii HOM05D004739 ORTHO05D005784 2.0e-08 63.9 77 57.1
A07p13510 Brassica napus HOM05D004011 ORTHO05D005290 2.6e-08 63.5 78 42.3
BraA07t29109Z Brassica rapa HOM05D004011 ORTHO05D005290 2.6e-08 63.5 78 42.3
Sp1g21620 Schrenkiella parvula HOM05D004011 ORTHO05D005290 3.4e-08 63.2 63 47.6
Nn3g17098 Nelumbo nucifera HOM05D004011 ORTHO05D005290 4.5e-08 62.8 106 33.0
AL1G38330 Arabidopsis lyrata HOM05D004011 ORTHO05D005290 5.8e-08 62.4 92 39.1
Eucgr.B03399 Eucalyptus grandis HOM05D004011 ORTHO05D005290 5.8e-08 62.4 63 49.2
A07p13370 Brassica napus HOM05D004011 ORTHO05D005290 7.6e-08 62.0 78 41.0
AUR62026479 Chenopodium quinoa HOM05D004011 ORTHO05D005290 7.6e-08 62.0 101 38.6
Cc11_g13690 Coffea canephora HOM05D004011 ORTHO05D005290 7.6e-08 62.0 84 36.9
Haze_12040 Corylus avellana HOM05D004011 ORTHO05D005290 7.6e-08 62.0 119 31.1
Actinidia19850 Actinidia chinensis HOM05D004011 ORTHO05D005290 1.0e-07 61.6 98 37.8
AT1G27150 Arabidopsis thaliana HOM05D004011 ORTHO05D005290 1.0e-07 61.6 92 38.0
BcaB07g32390 Brassica carinata HOM05D004011 ORTHO05D005290 1.0e-07 61.6 91 36.3
Medtr5g037400 Medicago truncatula HOM05D004011 ORTHO05D005290 1.0e-07 61.6 76 38.2
Sopen05g002700 Solanum pennellii HOM05D004011 ORTHO05D005290 1.0e-07 61.6 76 38.2
C05p23640 Brassica napus HOM05D004011 ORTHO05D005290 1.3e-07 61.2 78 38.5
Cfa009061 Carpinus fangiana HOM05D004011 ORTHO05D005290 1.3e-07 61.2 74 40.5
Thhalv10007555m.g Eutrema salsugineum HOM05D004011 ORTHO05D005290 1.3e-07 61.2 63 47.6
Nitab4.5_0001726g0090 Nicotiana tabacum HOM05D004011 ORTHO05D005290 1.3e-07 61.2 98 38.8
Atru.chr11.1880 Acer truncatum HOM05D004011 ORTHO05D005290 1.7e-07 60.8 101 37.6
Aa31LG7G8050 Aethionema arabicum HOM05D004011 ORTHO05D005290 1.7e-07 60.8 63 46.0
BcaC05g26340 Brassica carinata HOM05D004011 ORTHO05D005290 1.7e-07 60.8 78 38.5
BcaC06g35087 Brassica carinata HOM05D004011 ORTHO05D005290 1.7e-07 60.8 78 41.0
CARHR024720 Cardamine hirsuta HOM05D004011 ORTHO05D005290 1.7e-07 60.8 92 39.1
Medtr5g037420 Medicago truncatula HOM05D004011 ORTHO05D005290 1.7e-07 60.8 76 38.2
C07p20000 Brassica napus HOM05D004011 ORTHO05D005290 2.2e-07 60.5 63 46.0
BolC7t42519H Brassica oleracea HOM05D004011 ORTHO05D005290 2.2e-07 60.5 63 46.0
Migut.L01360 Erythranthe guttata HOM05D004011 ORTHO05D005290 2.2e-07 60.5 92 37.0
Nitab4.5_0000408g0060 Nicotiana tabacum HOM05D004011 ORTHO05D005290 2.2e-07 60.5 74 41.9
Solyc05g006760.4 Solanum lycopersicum HOM05D004011 ORTHO05D005290 2.2e-07 60.5 76 38.2
TPR.G26722 Trifolium pratense HOM05D004011 ORTHO05D005290 2.2e-07 60.5 70 40.0
Ciclev10031073m.g Citrus clementina HOM05D004011 ORTHO05D005290 2.9e-07 60.1 83 37.3
Lj3C1043T17 Lonicera japonica HOM05D004011 ORTHO05D005290 2.9e-07 60.1 68 42.6
Psat2g115960 Pisum sativum HOM05D004011 ORTHO05D005290 2.9e-07 60.1 76 39.5
ATR0001G025 Amborella trichopoda HOM05D004011 ORTHO05D005290 3.8e-07 59.7 64 40.6
DCAR_031068 Daucus carota HOM05D004011 ORTHO05D005290 3.8e-07 59.7 87 36.8
Lsat_1_v5_gn_8_163421 Lactuca sativa HOM05D004011 ORTHO05D005290 3.8e-07 59.7 68 39.7
Peaxi162Scf00209g00842 Petunia axillaris HOM05D004011 ORTHO05D005290 3.8e-07 59.7 74 40.5
TWI36G1736 Tripterygium wilfordii HOM05D004011 ORTHO05D005290 3.8e-07 59.7 63 44.4
Carub.0001s2380 Capsella rubella HOM05D004011 ORTHO05D005290 5.0e-07 59.3 62 46.8
Ca_04688_v3 Cicer arietinum L. HOM05D004011 ORTHO05D005290 5.0e-07 59.3 76 39.5
HanXRQChr12g0371081 Helianthus annuus HOM05D004011 ORTHO05D005290 5.0e-07 59.3 92 34.8
MD16G1081000 Malus domestica HOM05D004011 ORTHO05D005290 5.0e-07 59.3 76 39.5
Manes.01G192600 Manihot esculenta HOM05D004011 ORTHO05D005290 5.0e-07 59.3 91 38.5
RcHm_v2.0_Chr4g0445221 Rosa chinensis HOM05D004011 ORTHO05D005290 5.0e-07 59.3 74 39.2
TAR622G0281 Trochodendron aralioides HOM05D004011 ORTHO05D005290 5.0e-07 59.3 74 39.2
BolC8t47901H Brassica oleracea HOM05D004011 ORTHO05D005290 6.5e-07 58.9 92 35.9
CAN.G27.36 Capsicum annuum HOM05D004011 ORTHO05D005290 6.5e-07 58.9 74 39.2
PSO423G0236 Papaver somniferum HOM05D004011 ORTHO05D005290 6.5e-07 58.9 110 30.9
BolC5t31078H Brassica oleracea HOM05D004011 ORTHO05D005290 8.4e-07 58.5 78 37.2
CiPaw.05G142000 Carya illinoinensis HOM05D004011 ORTHO05D005290 8.4e-07 58.5 63 44.4
Potri.010G035400 Populus trichocarpa HOM05D004011 ORTHO05D005290 8.4e-07 58.5 59 45.8
THA.LOC104822935 Tarenaya hassleriana HOM05D004011 ORTHO05D005290 8.4e-07 58.5 74 43.2
A09p40530 Brassica napus HOM05D004011 ORTHO05D005290 1.1e-06 58.2 63 41.3
BraA09t39549Z Brassica rapa HOM05D004011 ORTHO05D005290 1.1e-06 58.2 63 41.3
Prupe.1G265000 Prunus persica HOM05D004011 ORTHO05D005290 1.1e-06 58.2 63 42.9
arahy.Tifrunner.gnm1.ann1.DHW1RD Arachis hypogaea HOM05D004011 ORTHO05D005290 1.4e-06 57.8 63 44.4
Lj2g0011655 Lotus japonicus HOM05D004011 ORTHO05D005290 1.4e-06 57.8 67 38.8
Lalb_Chr09g0326751 Lupinus albus HOM05D004011 ORTHO05D005290 1.4e-06 57.8 85 35.3
Oeu028543.1 Olea europaea HOM05D004011 ORTHO05D005290 1.4e-06 57.8 58 43.1
Sc11g0001560 Simmondsia chinensis HOM05D004011 ORTHO05D005290 1.4e-06 57.8 76 38.2
Thecc.02G234800 Theobroma cacao HOM05D004011 ORTHO05D005290 1.4e-06 57.8 91 38.5
arahy.Tifrunner.gnm1.ann1.XM7912 Arachis hypogaea HOM05D004011 ORTHO05D005290 1.9e-06 57.4 61 41.0
Glyma.01G040300 Glycine max HOM05D004011 ORTHO05D005290 1.9e-06 57.4 56 48.2
Sabra10G0029400 Salix brachista HOM05D004011 ORTHO05D005290 1.9e-06 57.4 59 45.8
EL10Ac6g13125 Beta vulgaris HOM05D004011 ORTHO05D005290 2.5e-06 57.0 121 32.2
ECA248G0235 Erigeron canadensis HOM05D004011 ORTHO05D005290 2.5e-06 57.0 57 43.9
FvH4_4g35610 Fragaria vesca HOM05D004011 ORTHO05D005290 3.2e-06 56.6 77 36.4
FAN12G0945 Fragaria x ananassa HOM05D004011 ORTHO05D005290 3.2e-06 56.6 77 36.4
FAN22G2312 Fragaria x ananassa HOM05D004011 ORTHO05D005290 3.2e-06 56.6 77 36.4
Sp1g21670 Schrenkiella parvula HOM05D004011 ORTHO05D005290 3.2e-06 56.6 86 34.9
Hund05926 Selenicereus undatus HOM05D004011 ORTHO05D005290 3.2e-06 56.6 63 44.4
GSVIVG01020097001 Vitis vinifera HOM05D004011 ORTHO05D005290 3.2e-06 56.6 62 43.5
COL.COLO4_36215 Corchorus olitorius HOM05D004011 ORTHO05D005290 4.2e-06 56.2 63 42.9
Glyma.02G024500 Glycine max HOM05D004011 ORTHO05D005290 4.2e-06 56.2 56 46.4
THA.LOC104822089 Tarenaya hassleriana HOM05D004011 ORTHO05D005290 4.2e-06 56.2 57 45.6
vmacro01220 Vaccinium macrocarpon HOM05D004011 ORTHO05D005290 4.2e-06 56.2 67 40.3
BcaC07g37560 Brassica carinata HOM05D004011 ORTHO05D005290 5.5e-06 55.8 57 45.6
A08p08630 Brassica napus HOM05D004011 ORTHO05D005290 5.5e-06 55.8 56 46.4
FAN07G2799 Fragaria x ananassa HOM05D004011 ORTHO05D005290 5.5e-06 55.8 63 38.1
CSS0048676 Camellia sinensis var. sinensis HOM05D004011 ORTHO05D005290 7.2e-06 55.5 68 38.2
BcaB03g14111 Brassica carinata HOM05D004011 ORTHO05D005290 9.3e-06 55.1 78 34.6
BraA08t34710Z Brassica rapa HOM05D004011 ORTHO05D005290 9.3e-06 55.1 74 37.8
Gohir.A01G142100 Gossypium hirsutum HOM05D004011 ORTHO05D005290 9.3e-06 55.1 59 42.4
Gohir.D01G133600 Gossypium hirsutum HOM05D004011 ORTHO05D005290 9.3e-06 55.1 59 42.4
Gorai.002G165100 Gossypium raimondii HOM05D004011 ORTHO05D005290 9.3e-06 55.1 59 42.4
Os03g0689900 Oryza sativa ssp. japonica HOM05D004011 ORTHO05D005290 9.3e-06 55.1 63 41.3
SMO252G0017 Selaginella moellendorffii HOM05D004739 ORTHO05D005784 9.3e-06 55.1 55 60.0


User provided reference genes

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