Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO331G0003 Selaginella moellendorffii HOM05D001521 ORTHO05D001342 5.7e-286 986.9 489 100.0
SMO252G0020 Selaginella moellendorffii HOM05D001521 ORTHO05D001342 7.8e-243 843.6 489 88.1
SMO118G0525 Selaginella moellendorffii HOM05D001521 ORTHO05D001342 1.9e-172 609.8 489 66.1
SMO266G0078 Selaginella moellendorffii HOM05D001521 ORTHO05D001342 9.5e-108 394.8 476 43.7
SMO367G0474 Selaginella moellendorffii HOM05D001521 ORTHO05D001342 6.9e-66 255.8 482 32.0
SMO119G0247 Selaginella moellendorffii HOM05D001521 ORTHO05D001342 3.0e-61 240.4 490 31.4
SMO367G0904 Selaginella moellendorffii HOM05D001521 ORTHO05D001342 1.9e-60 237.7 480 33.1
SMO367G0351 Selaginella moellendorffii HOM05D001521 ORTHO05D001342 1.3e-51 208.4 403 33.5
SMO266G0050 Selaginella moellendorffii HOM05D001521 ORTHO05D001342 2.8e-51 207.2 230 47.0
SMO367G0109 Selaginella moellendorffii HOM05D001521 ORTHO05D001342 4.8e-51 206.5 395 34.4
SMO089G0022 Selaginella moellendorffii HOM05D001521 ORTHO05D001342 1.1e-34 152.1 271 33.6
Lj1P1067T12 Lonicera japonica HOM05D001521 ORTHO05D001342 4.1e-34 150.2 473 28.1
Dinv12865 Davidia involucrata HOM05D001521 ORTHO05D001342 2.0e-33 147.9 471 28.7
Actinidia11759 Actinidia chinensis HOM05D001521 ORTHO05D001342 2.7e-33 147.5 410 29.0
Cpa.g.sc291.2 Carica papaya HOM05D001521 ORTHO05D001342 1.3e-32 145.2 317 30.6
Dinv37733 Davidia involucrata HOM05D001521 ORTHO05D001342 1.1e-31 142.1 406 30.0
Lj4P822T29 Lonicera japonica HOM05D001521 ORTHO05D001342 3.2e-31 140.6 318 31.8
TAR383G0835 Trochodendron aralioides HOM05D001521 ORTHO05D001342 1.6e-30 138.3 473 27.3
TAR371G0196 Trochodendron aralioides HOM05D001521 ORTHO05D001342 1.4e-29 135.2 474 28.3
GSVIVG01028618001 Vitis vinifera HOM05D001521 ORTHO05D001342 1.4e-29 135.2 319 31.3
Rhsim05G0011700 Rhododendron simsii HOM05D001521 ORTHO05D001342 2.3e-29 134.4 317 29.7
SalBow6G1515 Salvia bowleyana HOM05D001521 ORTHO05D001342 3.0e-29 134.0 314 28.3
Rhsim07G0026400 Rhododendron simsii HOM05D001521 ORTHO05D001342 5.2e-29 133.3 332 30.4
GSVIVG01028606001 Vitis vinifera HOM05D001521 ORTHO05D001342 5.2e-29 133.3 478 25.9
Hma1.2p1_0225F.1_g094780 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 6.8e-29 132.9 318 30.8
Prupe.2G097700 Prunus persica HOM05D001521 ORTHO05D001342 5.7e-28 129.8 477 27.0
Rhsim05G0010000 Rhododendron simsii HOM05D001521 ORTHO05D001342 5.7e-28 129.8 317 28.7
CSS0010403 Camellia sinensis var. sinensis HOM05D001521 ORTHO05D001342 1.7e-27 128.3 317 30.6
Dinv05622 Davidia involucrata HOM05D001521 ORTHO05D001342 3.7e-27 127.1 422 26.1
Cpa.g.sc264.8 Carica papaya HOM05D001521 ORTHO05D001342 4.8e-27 126.7 335 31.0
CsaV3_6G006900 Cucumis sativus L. HOM05D001521 ORTHO05D001342 4.8e-27 126.7 319 30.7
GSVIVG01028617001 Vitis vinifera HOM05D001521 ORTHO05D001342 6.3e-27 126.3 318 29.6
Dinv37719 Davidia involucrata HOM05D001521 ORTHO05D001342 8.3e-27 125.9 318 30.2
Duzib177G0128 Durio zibethinus HOM05D001521 ORTHO05D001342 8.3e-27 125.9 314 29.3
Rhsim08G0035600 Rhododendron simsii HOM05D001521 ORTHO05D001342 1.1e-26 125.6 321 29.3
Rhsim05G0011500 Rhododendron simsii HOM05D001521 ORTHO05D001342 2.4e-26 124.4 318 29.6
Cpa.g.sc264.7 Carica papaya HOM05D001521 ORTHO05D001342 3.1e-26 124.0 477 28.5
ClCG06G001060 Citrullus lanatus HOM05D001521 ORTHO05D001342 3.1e-26 124.0 479 24.6
Sed0027833 Sechium edule HOM05D001521 ORTHO05D001342 4.1e-26 123.6 323 31.0
Duzib177G1049 Durio zibethinus HOM05D001521 ORTHO05D001342 2.0e-25 121.3 315 28.6
SalBow6G5371 Salvia bowleyana HOM05D001521 ORTHO05D001342 2.0e-25 121.3 314 28.3
CsaV3_6G006860 Cucumis sativus L. HOM05D001521 ORTHO05D001342 2.7e-25 120.9 321 29.3
CsaV3_6G006870 Cucumis sativus L. HOM05D001521 ORTHO05D001342 2.7e-25 120.9 315 27.3
PSO717G0140 Papaver somniferum HOM05D001521 ORTHO05D001342 3.5e-25 120.6 481 27.7
ClCG06G000920 Citrullus lanatus HOM05D001521 ORTHO05D001342 4.5e-25 120.2 338 28.4
CsaV3_6G006880 Cucumis sativus L. HOM05D001521 ORTHO05D001342 4.5e-25 120.2 313 28.1
PSO017G3707 Papaver somniferum HOM05D001521 ORTHO05D001342 4.5e-25 120.2 481 27.7
Dinv04994 Davidia involucrata HOM05D001521 ORTHO05D001342 7.7e-25 119.4 418 26.1
Duzib177G0777 Durio zibethinus HOM05D001521 ORTHO05D001342 7.7e-25 119.4 311 28.6
Rhsim05G0010100 Rhododendron simsii HOM05D001521 ORTHO05D001342 1.3e-24 118.6 316 27.2
Lj6P278T5 Lonicera japonica HOM05D001521 ORTHO05D001342 2.2e-24 117.9 313 27.8
PSO717G0052 Papaver somniferum HOM05D001521 ORTHO05D001342 2.2e-24 117.9 481 27.0
PSO717G0099 Papaver somniferum HOM05D001521 ORTHO05D001342 2.2e-24 117.9 481 27.0
Sed0017368 Sechium edule HOM05D001521 ORTHO05D001342 2.2e-24 117.9 312 29.5
Rhsim05G0011800 Rhododendron simsii HOM05D001521 ORTHO05D001342 2.9e-24 117.5 324 27.5
Aqoxy7G03595 Aquilegia oxysepala HOM05D001521 ORTHO05D001342 6.5e-24 116.3 412 26.7
Lj9P654T21 Lonicera japonica HOM05D001521 ORTHO05D001342 6.5e-24 116.3 372 29.0
PSO246G0001 Papaver somniferum HOM05D001521 ORTHO05D001342 6.5e-24 116.3 338 29.9
Oeu035081.1 Olea europaea HOM05D001521 ORTHO05D001342 1.5e-23 115.2 488 25.8
Rhsim05G0009700 Rhododendron simsii HOM05D001521 ORTHO05D001342 1.5e-23 115.2 315 28.9
MELO3C022429.2 Cucumis melo HOM05D001521 ORTHO05D001342 1.9e-23 114.8 476 24.2
Lj1P1067T24 Lonicera japonica HOM05D001521 ORTHO05D001342 1.9e-23 114.8 288 29.2
MELO3C022436.2 Cucumis melo HOM05D001521 ORTHO05D001342 1.6e-22 111.7 312 27.6
Gohir.A02G009148 Gossypium hirsutum HOM05D001521 ORTHO05D001342 1.6e-22 111.7 318 27.4
ClCG06G003020 Citrullus lanatus HOM05D001521 ORTHO05D001342 2.1e-22 111.3 323 29.7
Duzib177G0352 Durio zibethinus HOM05D001521 ORTHO05D001342 2.1e-22 111.3 292 28.4
PSO675G6111 Papaver somniferum HOM05D001521 ORTHO05D001342 2.1e-22 111.3 475 26.1
Duzib177G0760 Durio zibethinus HOM05D001521 ORTHO05D001342 4.7e-22 110.2 317 28.7
Sed0026868 Sechium edule HOM05D001521 ORTHO05D001342 4.7e-22 110.2 480 28.3
CsaV3_6G006990 Cucumis sativus L. HOM05D001521 ORTHO05D001342 8.0e-22 109.4 472 25.6
Gohir.A02G009200 Gossypium hirsutum HOM05D001521 ORTHO05D001342 8.0e-22 109.4 318 26.7
Gorai.005G011500 Gossypium raimondii HOM05D001521 ORTHO05D001342 8.0e-22 109.4 318 26.7
Duzib177G0132 Durio zibethinus HOM05D001521 ORTHO05D001342 1.0e-21 109.0 459 23.5
Gohir.D02G018600 Gossypium hirsutum HOM05D001521 ORTHO05D001342 1.0e-21 109.0 415 25.1
Sed0020102 Sechium edule HOM05D001521 ORTHO05D001342 1.4e-21 108.6 315 27.6
MELO3C021142.2 Cucumis melo HOM05D001521 ORTHO05D001342 1.8e-21 108.2 317 27.1
Gohir.A02G009300 Gossypium hirsutum HOM05D001521 ORTHO05D001342 1.8e-21 108.2 320 27.8
Gohir.D02G009400 Gossypium hirsutum HOM05D001521 ORTHO05D001342 2.3e-21 107.8 318 26.7
TWI38G1624 Tripterygium wilfordii HOM05D001521 ORTHO05D001342 3.0e-21 107.5 414 25.1
PSO541G4178 Papaver somniferum HOM05D001521 ORTHO05D001342 4.0e-21 107.1 489 26.0
RcHm_v2.0_Chr5g0072501 Rosa chinensis HOM05D001521 ORTHO05D001342 4.0e-21 107.1 336 28.0
Gohir.D02G009700 Gossypium hirsutum HOM05D001521 ORTHO05D001342 5.2e-21 106.7 370 25.4
Gorai.005G012000 Gossypium raimondii HOM05D001521 ORTHO05D001342 5.2e-21 106.7 370 25.4
PSO541G3315 Papaver somniferum HOM05D001521 ORTHO05D001342 5.2e-21 106.7 488 25.4
Hma1.2p1_0033F.1_g020980 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 6.8e-21 106.3 320 27.8
Prupe.2G097500 Prunus persica HOM05D001521 ORTHO05D001342 6.8e-21 106.3 331 27.2
Rhsim05G0009800 Rhododendron simsii HOM05D001521 ORTHO05D001342 8.8e-21 105.9 312 26.9
MELO3C022437.2 Cucumis melo HOM05D001521 ORTHO05D001342 1.2e-20 105.5 315 25.4
Gorai.005G023100 Gossypium raimondii HOM05D001521 ORTHO05D001342 1.2e-20 105.5 415 24.8
CsaV3_6G006970 Cucumis sativus L. HOM05D001521 ORTHO05D001342 2.0e-20 104.8 476 24.2
CSS0022841 Camellia sinensis var. sinensis HOM05D001521 ORTHO05D001342 2.6e-20 104.4 326 28.2
CsaV3_6G006960 Cucumis sativus L. HOM05D001521 ORTHO05D001342 2.6e-20 104.4 313 26.2
ClCG06G003010 Citrullus lanatus HOM05D001521 ORTHO05D001342 5.7e-20 103.2 331 27.5
Hma1.2p1_0033F.1_g020970 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 7.5e-20 102.8 320 27.8
Cpa.g.sc1831.1 Carica papaya HOM05D001521 ORTHO05D001342 9.8e-20 102.4 320 29.4
PSO104G0194 Papaver somniferum HOM05D001521 ORTHO05D001342 1.7e-19 101.7 478 23.2
Hma1.2p1_0439F.1_g153190 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 6.3e-19 99.8 431 26.7
Gohir.A02G009500 Gossypium hirsutum HOM05D001521 ORTHO05D001342 8.3e-19 99.4 313 26.5
Gohir.D02G009800 Gossypium hirsutum HOM05D001521 ORTHO05D001342 1.4e-18 98.6 313 26.5
MD02G1240000 Malus domestica HOM05D001521 ORTHO05D001342 1.4e-18 98.6 335 26.9
FvH4_7g07020 Fragaria vesca HOM05D001521 ORTHO05D001342 2.4e-18 97.8 317 25.9
Gorai.005G012100 Gossypium raimondii HOM05D001521 ORTHO05D001342 2.4e-18 97.8 313 26.5
FAN06G3326 Fragaria x ananassa HOM05D001521 ORTHO05D001342 3.1e-18 97.4 317 25.9
FAN10G4107 Fragaria x ananassa HOM05D001521 ORTHO05D001342 5.4e-18 96.7 317 25.9
MD01G1104300 Malus domestica HOM05D001521 ORTHO05D001342 5.4e-18 96.7 318 29.6
PSO782G0070 Papaver somniferum HOM05D001521 ORTHO05D001342 5.4e-18 96.7 355 27.3
CSS0049728 Camellia sinensis var. sinensis HOM05D001521 ORTHO05D001342 1.2e-17 95.5 373 27.1
Hma1.2p1_0439F.1_g153140 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 1.2e-17 95.5 323 28.5
ClCG06G001040 Citrullus lanatus HOM05D001521 ORTHO05D001342 2.0e-17 94.7 434 25.3
Gohir.A02G009400 Gossypium hirsutum HOM05D001521 ORTHO05D001342 2.0e-17 94.7 415 25.1
RcHm_v2.0_Chr1g0336971 Rosa chinensis HOM05D001521 ORTHO05D001342 2.7e-17 94.4 318 26.4
MD02G1240200 Malus domestica HOM05D001521 ORTHO05D001342 4.5e-17 93.6 335 26.6
CANSAT21G0839 Cannabis sativa HOM05D001521 ORTHO05D001342 5.9e-17 93.2 397 24.4
PSO170G3049 Papaver somniferum HOM05D001521 ORTHO05D001342 7.8e-17 92.8 323 27.2
PSO782G5012 Papaver somniferum HOM05D001521 ORTHO05D001342 1.3e-16 92.0 323 27.2
SMO343G0109 Selaginella moellendorffii HOM05D001521 ORTHO05D001342 1.3e-16 92.0 244 27.9
Zm00001eb088020 Zea mays HOM05D001521 ORTHO05D001342 1.7e-16 91.7 335 27.8
FAN05G0146 Fragaria x ananassa HOM05D001521 ORTHO05D001342 2.3e-16 91.3 334 27.2
Zm00001eb087960 Zea mays HOM05D001521 ORTHO05D001342 2.3e-16 91.3 335 25.7
ECA247G0917 Erigeron canadensis HOM05D001521 ORTHO05D001342 2.9e-16 90.9 323 29.7
MELO3C022434.2 Cucumis melo HOM05D001521 ORTHO05D001342 3.8e-16 90.5 316 27.5
FvH4_6g46030 Fragaria vesca HOM05D001521 ORTHO05D001342 3.8e-16 90.5 329 26.4
SalBow8G0938 Salvia bowleyana HOM05D001521 ORTHO05D001342 3.8e-16 90.5 476 25.0
PSO063G1253 Papaver somniferum HOM05D001521 ORTHO05D001342 5.0e-16 90.1 265 28.3
Ah.15g098810 Amaranthus hybridus HOM05D001521 ORTHO05D001342 1.1e-15 89.0 333 29.1
Gohir.A02G009466 Gossypium hirsutum HOM05D001521 ORTHO05D001342 1.1e-15 89.0 415 25.3
Cpa.g.sc567.1 Carica papaya HOM05D001521 ORTHO05D001342 4.3e-15 87.0 315 25.1
Rhsim05G0011200 Rhododendron simsii HOM05D001521 ORTHO05D001342 4.3e-15 87.0 270 27.4
AUR62040541 Chenopodium quinoa HOM05D001521 ORTHO05D001342 7.3e-15 86.3 277 28.2
ECA233G0126 Erigeron canadensis HOM05D000014 ORTHO05D000093 7.3e-15 86.3 340 29.4
PSO339G3460 Papaver somniferum HOM05D001521 ORTHO05D001342 9.5e-15 85.9 373 26.0
FAN05G2510 Fragaria x ananassa HOM05D001521 ORTHO05D001342 1.2e-14 85.5 341 25.5
Gohir.D02G009500 Gossypium hirsutum HOM05D001521 ORTHO05D001342 1.2e-14 85.5 287 24.7
Hma1.2p1_0439F.1_g153130 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 2.8e-14 84.3 426 23.5
PSO339G3048 Papaver somniferum HOM05D001521 ORTHO05D001342 2.8e-14 84.3 373 26.0
PSO675G6418 Papaver somniferum HOM05D001521 ORTHO05D001342 2.8e-14 84.3 268 31.0
ECA247G2812 Erigeron canadensis HOM05D001521 ORTHO05D001342 3.6e-14 84.0 346 26.0
COL.COLO4_27139 Corchorus olitorius HOM05D001521 ORTHO05D001342 6.1e-14 83.2 327 27.2
Gohir.A02G009164 Gossypium hirsutum HOM05D001521 ORTHO05D001342 6.1e-14 83.2 479 23.2
CANSAT11G1279 Cannabis sativa HOM05D001521 ORTHO05D001342 1.4e-13 82.0 334 25.4
Gorai.005G011900 Gossypium raimondii HOM05D001521 ORTHO05D001342 3.0e-13 80.9 300 25.3
Lj9P164T4 Lonicera japonica HOM05D001521 ORTHO05D001342 3.0e-13 80.9 222 29.7
Dinv37728 Davidia involucrata HOM05D001521 ORTHO05D001342 4.0e-13 80.5 132 34.8
EL10Ac6g13883 Beta vulgaris HOM05D001521 ORTHO05D001342 5.2e-13 80.1 332 27.4
FAN02G0887 Fragaria x ananassa HOM05D001521 ORTHO05D001342 6.8e-13 79.7 300 26.7
MELO3C022255.2 Cucumis melo HOM05D001521 ORTHO05D001342 8.9e-13 79.3 328 23.5
ECA247G1001 Erigeron canadensis HOM05D001521 ORTHO05D001342 1.2e-12 79.0 327 26.9
MD03G1201500 Malus domestica HOM05D001521 ORTHO05D001342 1.2e-12 79.0 237 28.7
Sed0017923 Sechium edule HOM05D001521 ORTHO05D001342 1.2e-12 79.0 315 25.1
CANSAT11G0684 Cannabis sativa HOM05D001521 ORTHO05D001342 1.5e-12 78.6 324 26.2
CANSAT80G0301 Cannabis sativa HOM05D001521 ORTHO05D001342 1.5e-12 78.6 289 24.6
ECA232G3207 Erigeron canadensis HOM05D001521 ORTHO05D001342 3.4e-12 77.4 280 25.4
PSO031G0001 Papaver somniferum HOM05D001521 ORTHO05D001342 3.4e-12 77.4 310 25.8
SalBow1G5839 Salvia bowleyana HOM05D001521 ORTHO05D001342 4.4e-12 77.0 416 23.8
ECA233G2672 Erigeron canadensis HOM05D001521 ORTHO05D001342 9.8e-12 75.9 257 31.5
ECA247G2522 Erigeron canadensis HOM05D001521 ORTHO05D001342 9.8e-12 75.9 258 26.0
Hma1.2p1_3600F.1_g336970 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 9.8e-12 75.9 319 27.3
ECA233G2056 Erigeron canadensis HOM05D001521 ORTHO05D001342 1.3e-11 75.5 256 30.9
CsaV3_6G006750 Cucumis sativus L. HOM05D001521 ORTHO05D001342 2.2e-11 74.7 341 24.9
PSO104G0202 Papaver somniferum HOM05D001521 ORTHO05D001342 2.2e-11 74.7 247 30.0
Sed0028148 Sechium edule HOM05D001521 ORTHO05D001342 2.2e-11 74.7 318 25.2
Lj6P274T6 Lonicera japonica HOM05D001521 ORTHO05D001342 8.3e-11 72.8 174 28.2
ECA233G4699 Erigeron canadensis HOM05D001521 ORTHO05D001342 1.1e-10 72.4 257 30.4
PSO421G0189 Papaver somniferum HOM05D001521 ORTHO05D001342 1.4e-10 72.0 251 25.9
ECA247G1360 Erigeron canadensis HOM05D001521 ORTHO05D001342 1.8e-10 71.6 306 23.5
ECA233G0182 Erigeron canadensis HOM05D001521 ORTHO05D001342 2.4e-10 71.2 258 30.6
Sed0007160 Sechium edule HOM05D001521 ORTHO05D001342 2.4e-10 71.2 225 24.4
EL10As2g23150 Beta vulgaris HOM05D001521 ORTHO05D001342 3.2e-10 70.9 319 26.6
CsaV3_6G008850 Cucumis sativus L. HOM05D001521 ORTHO05D001342 4.1e-10 70.5 324 23.5
Sc04g0007420 Simmondsia chinensis HOM05D001521 ORTHO05D001342 9.2e-10 69.3 195 30.3
SEGI_41068 Sequoiadendron giganteum HOM05D001521 ORTHO05D001342 2.7e-09 67.8 236 28.4
ECA247G3784 Erigeron canadensis HOM05D001521 ORTHO05D001342 7.8e-09 66.2 320 24.4
Cpa.g.c42995 Carica papaya HOM05D001521 ORTHO05D001342 1.0e-08 65.9 172 28.5
SMO358G0087 Selaginella moellendorffii HOM05D049777 ORTHO05D375213 8.6e-08 62.8 309 23.6
HanXRQChr13g0405701 Helianthus annuus HOM05D001521 ORTHO05D001342 1.1e-07 62.4 263 27.4
Dinv37718 Davidia involucrata HOM05D001521 ORTHO05D001342 1.5e-07 62.0 321 25.9
PSO339G2706 Papaver somniferum HOM05D001521 ORTHO05D001342 1.9e-07 61.6 321 25.9
ClCG06G000900 Citrullus lanatus HOM05D001521 ORTHO05D001342 2.5e-07 61.2 323 26.6
ECA233G3555 Erigeron canadensis HOM05D001521 ORTHO05D001342 1.2e-06 58.9 425 22.1
ECA233G4386 Erigeron canadensis HOM05D001521 ORTHO05D001342 1.2e-06 58.9 424 22.4
Gohir.A02G009433 Gossypium hirsutum HOM05D001521 ORTHO05D001342 1.2e-06 58.9 245 23.7
Lj9P658T33 Lonicera japonica HOM05D001521 ORTHO05D001342 1.2e-06 58.9 148 29.7
SEGI_07656 Sequoiadendron giganteum HOM05D001521 ORTHO05D001342 2.1e-06 58.2 114 33.3
Cpa.g.c34789 Carica papaya HOM05D001521 ORTHO05D001342 2.8e-06 57.8 250 24.4
Cpa.g.sc125.1 Carica papaya HOM05D001521 ORTHO05D001342 3.6e-06 57.4 245 24.5
PSO717G0111 Papaver somniferum HOM05D001521 ORTHO05D001342 3.6e-06 57.4 147 29.3
Lju124C11T1 Lonicera japonica HOM05D001521 ORTHO05D001342 6.2e-06 56.6 178 29.8


User provided reference genes

Program Settings