Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO330G0051 Selaginella moellendorffii HOM05D023475 ORTHO05D026126 2.2e-215 751.9 358 100.0
SMO147G0408 Selaginella moellendorffii HOM05D023475 ORTHO05D026126 8.4e-178 627.1 363 85.7
SMO115G0133 Selaginella moellendorffii HOM05D023475 ORTHO05D026126 3.4e-123 445.7 311 73.0
SMO166G0022 Selaginella moellendorffii HOM05D023475 ORTHO05D026126 2.2e-122 443.0 321 70.4
SMO107G0003 Selaginella moellendorffii HOM05D023475 ORTHO05D026126 1.5e-33 147.9 269 38.7
C07p17870 Brassica napus HOM05D002809 ORTHO05D004563 6.7e-10 69.3 189 30.7
BolC7t42293H Brassica oleracea HOM05D002809 ORTHO05D004563 6.7e-10 69.3 189 30.7
RcHm_v2.0_Chr4g0430081 Rosa chinensis HOM05D002809 ORTHO05D004563 1.5e-09 68.2 181 30.4
Migut.K00952 Erythranthe guttata HOM05D002809 ORTHO05D004563 2.0e-09 67.8 140 34.3
Migut.M00305 Erythranthe guttata HOM05D000007 ORTHO05D000039 2.0e-09 67.8 186 27.4
Medtr3g085160 Medicago truncatula HOM05D002809 ORTHO05D004563 2.0e-09 67.8 140 33.6
Cc11_g17010 Coffea canephora HOM05D002809 ORTHO05D004563 4.4e-09 66.6 188 30.3
Duzib268G1054 Durio zibethinus HOM05D002809 ORTHO05D004563 4.4e-09 66.6 140 34.3
Migut.M00306 Erythranthe guttata HOM05D000007 ORTHO05D000039 4.4e-09 66.6 195 27.2
Hund25470 Selenicereus undatus HOM05D002809 ORTHO05D004563 4.4e-09 66.6 247 25.9
Nn3g16449 Nelumbo nucifera HOM05D002809 ORTHO05D004563 5.7e-09 66.2 140 32.9
SEGI_08933 Sequoiadendron giganteum HOM05D002809 ORTHO05D004563 5.7e-09 66.2 139 33.8
FvH4_4g23620 Fragaria vesca HOM05D002809 ORTHO05D004563 7.4e-09 65.9 181 29.8
FAN17G0774 Fragaria x ananassa HOM05D002809 ORTHO05D004563 7.4e-09 65.9 181 29.8
Lalb_Chr23g0278141 Lupinus albus HOM05D002809 ORTHO05D004563 7.4e-09 65.9 137 32.8
FAN12G0247 Fragaria x ananassa HOM05D002809 ORTHO05D004563 9.7e-09 65.5 181 29.8
Duzib248G0261 Durio zibethinus HOM05D002809 ORTHO05D004563 1.3e-08 65.1 140 33.6
FAN07G0920 Fragaria x ananassa HOM05D002809 ORTHO05D004563 1.7e-08 64.7 137 34.3
THA.LOC104807128 Tarenaya hassleriana HOM05D002809 ORTHO05D004563 1.7e-08 64.7 179 31.3
THA.LOC104807136 Tarenaya hassleriana HOM05D002809 ORTHO05D004563 1.7e-08 64.7 179 31.3
CAN.G70.10 Capsicum annuum HOM05D002809 ORTHO05D004563 2.8e-08 63.9 184 28.3
Prupe.1G224600 Prunus persica HOM05D002809 ORTHO05D004563 2.8e-08 63.9 137 33.6
TPR.G17783 Trifolium pratense HOM05D002809 ORTHO05D004563 2.8e-08 63.9 140 32.1
CANSAT01G2827 Cannabis sativa HOM05D002809 ORTHO05D004563 3.7e-08 63.5 140 32.1
CARHR026910 Cardamine hirsuta HOM05D002809 ORTHO05D004563 3.7e-08 63.5 185 28.1
BcaC05g26739 Brassica carinata HOM05D002809 ORTHO05D004563 4.8e-08 63.2 185 28.1
Sp1g23570 Schrenkiella parvula HOM05D002809 ORTHO05D004563 4.8e-08 63.2 185 28.6
MBI07_g18750_MAGBIO Magnolia biondii HOM05D002809 ORTHO05D004563 6.3e-08 62.8 139 32.4
Nitab4.5_0004914g0010 Nicotiana tabacum HOM05D002809 ORTHO05D004563 6.3e-08 62.8 181 28.2
BraA09t39366Z Brassica rapa HOM05D002809 ORTHO05D004563 8.2e-08 62.4 185 28.1
Dinv17569 Davidia involucrata HOM05D002809 ORTHO05D004563 8.2e-08 62.4 140 32.1
Lj3P1070T8 Lonicera japonica HOM05D002809 ORTHO05D004563 8.2e-08 62.4 184 28.3
BcaC05g26549 Brassica carinata HOM05D002809 ORTHO05D004563 1.1e-07 62.0 185 28.6
A09p38610 Brassica napus HOM05D002809 ORTHO05D004563 1.1e-07 62.0 185 28.1
C05p26040 Brassica napus HOM05D002809 ORTHO05D004563 1.1e-07 62.0 185 28.6
BraA07t28977Z Brassica rapa HOM05D002809 ORTHO05D004563 1.1e-07 62.0 200 28.5
Mapoly0101s0058 Marchantia polymorpha HOM05D002809 ORTHO05D004939 1.1e-07 62.0 176 30.1
Pp3c11_18710 Physcomitrium patens HOM05D004302 ORTHO05D004939 1.1e-07 62.0 228 26.8
AL1G40740 Arabidopsis lyrata HOM05D002809 ORTHO05D004563 1.4e-07 61.6 185 28.1
MSTRG.8011 Avicennia marina HOM05D002809 ORTHO05D004563 1.4e-07 61.6 140 32.9
Thhalv10007553m.g Eutrema salsugineum HOM05D002809 ORTHO05D004563 1.4e-07 61.6 185 28.6
MD13G1120600 Malus domestica HOM05D002809 ORTHO05D004563 1.4e-07 61.6 137 32.8
BolC5t31323H Brassica oleracea HOM05D002809 ORTHO05D004563 1.8e-07 61.2 139 33.1
Glyma.08G104800 Glycine max HOM05D002809 ORTHO05D004563 1.8e-07 61.2 178 28.7
Oeu006522.1 Olea europaea HOM05D002809 ORTHO05D004563 1.8e-07 61.2 137 32.1
AT1G27340 Arabidopsis thaliana HOM05D002809 ORTHO05D004563 2.4e-07 60.8 185 28.1
THA.LOC104825498 Tarenaya hassleriana HOM05D002809 ORTHO05D004563 3.1e-07 60.5 179 29.6
SalBow2G0967 Salvia bowleyana HOM05D002809 ORTHO05D004563 4.1e-07 60.1 184 28.3
SalBow4G3183 Salvia bowleyana HOM05D000007 ORTHO05D000017 4.1e-07 60.1 240 27.5
Actinidia20715 Actinidia chinensis HOM05D002809 ORTHO05D004563 5.3e-07 59.7 184 27.7
HanXRQChr12g0361241 Helianthus annuus HOM05D002809 ORTHO05D004563 5.3e-07 59.7 127 31.5
HanXRQChr12g0379041 Helianthus annuus HOM05D000007 ORTHO05D000039 7.0e-07 59.3 139 31.7
Rhsim12G0092200 Rhododendron simsii HOM05D002809 ORTHO05D004563 7.0e-07 59.3 138 33.3
CSS0014036 Camellia sinensis var. sinensis HOM05D002809 ORTHO05D004563 9.1e-07 58.9 140 31.4
Peaxi162Scf00128g00136 Petunia axillaris HOM05D002809 ORTHO05D004563 9.1e-07 58.9 184 28.8
Solyc05g015520.3 Solanum lycopersicum HOM05D002809 ORTHO05D004563 9.1e-07 58.9 140 31.4
Sopen12g034970 Solanum pennellii HOM05D002809 ORTHO05D004563 9.1e-07 58.9 140 31.4
GSVIVG01010498001 Vitis vinifera HOM05D002809 ORTHO05D004563 9.1e-07 58.9 181 26.5
Medtr7g055977 Medicago truncatula HOM05D000007 ORTHO05D000017 1.2e-06 58.5 129 33.3
SMO364G0869 Selaginella moellendorffii HOM05D003005 ORTHO05D004563 1.2e-06 58.5 124 32.3
ECA233G5207 Erigeron canadensis HOM05D002809 ORTHO05D004563 1.5e-06 58.2 130 31.5
HanXRQChr08g0209511 Helianthus annuus HOM05D000007 ORTHO05D000039 1.5e-06 58.2 131 29.8
Sc14g0009090 Simmondsia chinensis HOM05D002809 ORTHO05D004563 1.5e-06 58.2 139 30.2
PGSC0003DMG400034305 Solanum tuberosum HOM05D002809 ORTHO05D004563 1.5e-06 58.2 140 31.4
Lsat_1_v5_gn_7_3280 Lactuca sativa HOM05D000007 ORTHO05D000039 2.0e-06 57.8 135 31.9
EL10Ac6g13516 Beta vulgaris HOM05D002809 ORTHO05D004563 2.6e-06 57.4 126 32.5
Pp3c7_9930 Physcomitrium patens HOM05D002809 ORTHO05D004939 2.6e-06 57.4 106 36.8
Hund06095 Selenicereus undatus HOM05D002809 ORTHO05D004563 2.6e-06 57.4 140 30.7
vmacro16104 Vaccinium macrocarpon HOM05D002809 ORTHO05D004563 3.5e-06 57.0 139 31.7
Actinidia09645 Actinidia chinensis HOM05D002809 ORTHO05D004563 4.5e-06 56.6 184 25.5
BraA09t36769Z Brassica rapa HOM05D000209 ORTHO05D000129 4.5e-06 56.6 126 33.3
SalBow4G3067 Salvia bowleyana HOM05D000007 ORTHO05D000017 4.5e-06 56.6 160 32.5
Mapoly0012s0051 Marchantia polymorpha HOM05D018443 ORTHO05D015161 5.9e-06 56.2 136 33.8
Pp3c11_15444 Physcomitrium patens HOM05D002809 ORTHO05D004939 5.9e-06 56.2 106 36.8
SalBow2G0242 Salvia bowleyana HOM05D003262 ORTHO05D003608 5.9e-06 56.2 176 28.4
SGA_v2.0_scaffold5G02617 Striga asiatica HOM05D000007 ORTHO05D000039 5.9e-06 56.2 181 31.5
Actinidia31362 Actinidia chinensis HOM05D005977 ORTHO05D007546 7.7e-06 55.8 119 31.9
A09p11310 Brassica napus HOM05D000209 ORTHO05D000129 7.7e-06 55.8 126 33.3
HanXRQChr07g0186181 Helianthus annuus HOM05D000007 ORTHO05D000039 7.7e-06 55.8 132 30.3


User provided reference genes

Program Settings