Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO330G0006 Selaginella moellendorffii HOM05D005240 ORTHO05D006471 7.1e-80 300.4 141 100.0
SMO147G0062 Selaginella moellendorffii HOM05D005240 ORTHO05D006471 2.1e-71 272.3 176 76.7
SMO330G0010 Selaginella moellendorffii HOM05D005240 ORTHO05D006471 3.9e-70 268.1 172 77.3
SMO330G0030 Selaginella moellendorffii HOM05D005240 ORTHO05D006471 6.6e-70 267.3 169 78.1
SMO147G0059 Selaginella moellendorffii HOM05D005240 ORTHO05D006471 1.3e-62 243.0 162 74.1
SMO330G0038 Selaginella moellendorffii HOM05D005240 ORTHO05D006471 4.8e-60 234.6 153 75.8
SMO257G0002 Selaginella moellendorffii HOM05D005240 ORTHO05D006471 8.1e-52 207.2 174 63.8
SMO330G0050 Selaginella moellendorffii HOM05D005240 ORTHO05D006471 1.9e-45 186.0 131 72.5
SMO147G0342 Selaginella moellendorffii HOM05D005240 ORTHO05D006471 1.1e-40 170.2 80 97.5
AagrBONN_evm.TU.Sc2ySwM_117.2297 Anthoceros agrestis HOM05D005240 ORTHO05D006471 7.9e-39 164.1 176 48.3
Gohir.D04G083000 Gossypium hirsutum HOM05D005240 ORTHO05D006471 1.8e-38 162.9 171 47.4
CDE07G1884 Ceratophyllum demersum HOM05D005240 ORTHO05D006471 3.9e-38 161.8 174 46.6
Sc14g0005480 Simmondsia chinensis HOM05D005240 ORTHO05D006471 5.1e-38 161.4 168 49.4
Nitab4.5_0000061g0160 Nicotiana tabacum HOM05D005240 ORTHO05D006471 6.7e-38 161.0 168 47.6
Solyc10g005830.3 Solanum lycopersicum HOM05D005240 ORTHO05D006471 6.7e-38 161.0 167 47.9
Sopen10g001790 Solanum pennellii HOM05D005240 ORTHO05D006471 6.7e-38 161.0 167 47.9
Gorai.012G093700 Gossypium raimondii HOM05D005240 ORTHO05D006471 8.7e-38 160.6 171 47.4
Thecc.10G068200 Theobroma cacao HOM05D005240 ORTHO05D006471 1.1e-37 160.2 168 47.0
Peaxi162Scf00373g00310 Petunia axillaris HOM05D005240 ORTHO05D006471 1.5e-37 159.8 165 47.9
GSVIVG01016337001 Vitis vinifera HOM05D005240 ORTHO05D006471 1.5e-37 159.8 168 48.2
Zm00001eb148920 Zea mays HOM05D005240 ORTHO05D006471 1.9e-37 159.5 170 47.6
Gohir.A05G344500 Gossypium hirsutum HOM05D005240 ORTHO05D006471 2.5e-37 159.1 171 46.8
Mapoly0113s0026 Marchantia polymorpha HOM05D005240 ORTHO05D006471 3.3e-37 158.7 174 47.7
PGR044G1235 Punica granatum HOM05D005240 ORTHO05D006471 3.3e-37 158.7 172 47.1
Nitab4.5_0001721g0020 Nicotiana tabacum HOM05D005240 ORTHO05D006471 5.7e-37 157.9 168 47.6
AUR62020787 Chenopodium quinoa HOM05D005240 ORTHO05D006471 9.6e-37 157.1 183 44.3
Cc09_g02730 Coffea canephora HOM05D005240 ORTHO05D006471 1.3e-36 156.8 168 46.4
CiPaw.01G276500 Carya illinoinensis HOM05D005240 ORTHO05D006471 2.1e-36 156.0 169 45.0
TWI38G0703 Tripterygium wilfordii HOM05D005240 ORTHO05D006471 2.1e-36 156.0 168 47.0
Thecc.10G068300 Theobroma cacao HOM05D005240 ORTHO05D006471 4.8e-36 154.8 170 45.9
arahy.Tifrunner.gnm1.ann1.9PA5H9 Arachis hypogaea HOM05D005240 ORTHO05D006471 6.3e-36 154.5 179 43.6
TWI15G1019 Tripterygium wilfordii HOM05D005240 ORTHO05D006471 6.3e-36 154.5 168 46.4
BcaB06g28877 Brassica carinata HOM05D005240 ORTHO05D006471 8.2e-36 154.1 167 46.1
Hund19334 Selenicereus undatus HOM05D005240 ORTHO05D006471 8.2e-36 154.1 168 46.4
arahy.Tifrunner.gnm1.ann1.CT8M8A Arachis hypogaea HOM05D005240 ORTHO05D006471 1.1e-35 153.7 179 43.6
ECA238G3142 Erigeron canadensis HOM05D005240 ORTHO05D006471 1.1e-35 153.7 169 45.6
Ah.16g108220 Amaranthus hybridus HOM05D005240 ORTHO05D006471 1.4e-35 153.3 178 44.4
MD07G1179100 Malus domestica HOM05D005240 ORTHO05D006471 1.4e-35 153.3 167 47.3
Manes.10G042700 Manihot esculenta HOM05D005240 ORTHO05D006471 1.4e-35 153.3 168 45.8
PSO210G2142 Papaver somniferum HOM05D005240 ORTHO05D006471 1.4e-35 153.3 168 46.4
CANSAT56G2007 Cannabis sativa HOM05D005240 ORTHO05D006471 1.8e-35 152.9 175 44.0
Thhalv10017274m.g Eutrema salsugineum HOM05D005240 ORTHO05D006471 1.8e-35 152.9 168 45.8
THA.LOC104803452 Tarenaya hassleriana HOM05D005240 ORTHO05D006471 1.8e-35 152.9 166 45.8
Aqoxy4G03197 Aquilegia oxysepala HOM05D005240 ORTHO05D006471 2.4e-35 152.5 175 45.1
CSS0026127 Camellia sinensis var. sinensis HOM05D005240 ORTHO05D006471 2.4e-35 152.5 168 46.4
Lj5g0013716 Lotus japonicus HOM05D005240 ORTHO05D006471 2.4e-35 152.5 171 44.4
Prupe.2G218200 Prunus persica HOM05D005240 ORTHO05D006471 2.4e-35 152.5 172 44.8
CANSAT56G3849 Cannabis sativa HOM05D005240 ORTHO05D006471 3.1e-35 152.1 175 44.0
Carub.0004s1759 Capsella rubella HOM05D005240 ORTHO05D006471 3.1e-35 152.1 171 45.0
HanXRQChr07g0200441 Helianthus annuus HOM05D005240 ORTHO05D006471 3.1e-35 152.1 170 45.3
TAR636G2864 Trochodendron aralioides HOM05D005240 ORTHO05D006471 3.1e-35 152.1 171 45.6
AL4G31940 Arabidopsis lyrata HOM05D005240 ORTHO05D006471 4.1e-35 151.8 168 44.0
Duzib114G0729 Durio zibethinus HOM05D005240 ORTHO05D006471 4.1e-35 151.8 168 45.2
Duzib128G0461 Durio zibethinus HOM05D005240 ORTHO05D006471 4.1e-35 151.8 169 46.7
Migut.F01799 Erythranthe guttata HOM05D005240 ORTHO05D006471 4.1e-35 151.8 168 45.8
Lsat_1_v5_gn_2_115080 Lactuca sativa HOM05D005240 ORTHO05D006471 4.1e-35 151.8 171 45.6
RcHm_v2.0_Chr1g0364101 Rosa chinensis HOM05D005240 ORTHO05D006471 4.1e-35 151.8 164 46.3
Glyma.10G213900 Glycine max HOM05D005240 ORTHO05D006471 5.3e-35 151.4 169 44.4
Hma1.2p1_0453F.1_g156180 Hydrangea macrophylla HOM05D005240 ORTHO05D006471 5.3e-35 151.4 171 45.0
Nn2g13000 Nelumbo nucifera HOM05D005240 ORTHO05D006471 5.3e-35 151.4 181 45.3
Atru.chr12.634 Acer truncatum HOM05D005240 ORTHO05D006471 6.9e-35 151.0 170 45.3
FvH4_7g20150 Fragaria vesca HOM05D005240 ORTHO05D006471 6.9e-35 151.0 164 47.0
FAN06G0525 Fragaria x ananassa HOM05D005240 ORTHO05D006471 6.9e-35 151.0 164 47.0
Eucgr.J01124 Eucalyptus grandis HOM05D005240 ORTHO05D006471 1.2e-34 150.2 168 45.8
FAN03G2612 Fragaria x ananassa HOM05D005240 ORTHO05D006471 1.2e-34 150.2 164 45.7
DCAR_015276 Daucus carota HOM05D005240 ORTHO05D006471 1.5e-34 149.8 170 42.9
Potri.010G217500 Populus trichocarpa HOM05D005240 ORTHO05D006471 1.5e-34 149.8 161 46.6
VMungo0720G3076 Vigna mungo HOM05D005240 ORTHO05D006471 2.0e-34 149.4 169 43.8
ATR1159G086 Amborella trichopoda HOM05D005240 ORTHO05D006471 3.4e-34 148.7 191 41.9
MSTRG.355 Avicennia marina HOM05D005240 ORTHO05D006471 3.4e-34 148.7 168 45.2
Phvul.007G091800 Phaseolus vulgaris HOM05D005240 ORTHO05D006471 3.4e-34 148.7 169 43.8
ECA238G0657 Erigeron canadensis HOM05D005240 ORTHO05D006471 4.5e-34 148.3 163 46.0
Glyma.10G214000 Glycine max HOM05D005240 ORTHO05D006471 4.5e-34 148.3 169 45.0
arahy.Tifrunner.gnm1.ann1.D7L05R Arachis hypogaea HOM05D005240 ORTHO05D006471 5.9e-34 147.9 179 43.0
Medtr1g095890 Medicago truncatula HOM05D005240 ORTHO05D006471 5.9e-34 147.9 172 44.2
QL08p056831 Quercus lobata HOM05D005240 ORTHO05D006471 5.9e-34 147.9 171 43.3
MELO3C023691.2 Cucumis melo HOM05D005240 ORTHO05D006471 7.6e-34 147.5 169 42.6
Psat6g186000 Pisum sativum HOM05D005240 ORTHO05D006471 7.6e-34 147.5 167 44.3
AT2G35810 Arabidopsis thaliana HOM05D005240 ORTHO05D006471 1.0e-33 147.1 168 44.0
DCAR_019135 Daucus carota HOM05D005240 ORTHO05D006471 1.0e-33 147.1 171 43.3
Sp4g18090 Schrenkiella parvula HOM05D005240 ORTHO05D006471 1.0e-33 147.1 168 44.6
Ciclev10032844m.g Citrus clementina HOM05D005240 ORTHO05D006471 1.3e-33 146.7 161 46.0
FAN10G3611 Fragaria x ananassa HOM05D005240 ORTHO05D006471 1.3e-33 146.7 164 45.1
BcaC02g07666 Brassica carinata HOM05D005240 ORTHO05D006471 1.7e-33 146.4 170 44.7
Ca_10594_v3 Cicer arietinum L. HOM05D005240 ORTHO05D006471 1.7e-33 146.4 169 43.8
SGA_v2.0_scaffold122G33245 Striga asiatica HOM05D005240 ORTHO05D006471 2.9e-33 145.6 162 46.3
AT2G35830 Arabidopsis thaliana HOM05D005240 ORTHO05D006471 3.8e-33 145.2 169 43.2
A04p27280 Brassica napus HOM05D005240 ORTHO05D006471 5.0e-33 144.8 160 45.6
BraA04t18226Z Brassica rapa HOM05D005240 ORTHO05D006471 5.0e-33 144.8 160 45.6
Lalb_Chr06g0162141 Lupinus albus HOM05D005240 ORTHO05D006471 5.0e-33 144.8 167 43.7
MCO11G764 Micromonas commoda HOM05D005240 ORTHO05D006471 5.0e-33 144.8 160 46.2
Os01g0833200 Oryza sativa ssp. japonica HOM05D005240 ORTHO05D006471 5.0e-33 144.8 180 43.9
SalBow3G0637 Salvia bowleyana HOM05D005240 ORTHO05D006471 8.5e-33 144.1 157 45.9
Sed0009768 Sechium edule HOM05D005240 ORTHO05D006471 8.5e-33 144.1 169 42.0
AT2G35820 Arabidopsis thaliana HOM05D005240 ORTHO05D006471 1.1e-32 143.7 166 43.4
CARHR130080 Cardamine hirsuta HOM05D005240 ORTHO05D006471 1.4e-32 143.3 157 43.9
PSO170G1537 Papaver somniferum HOM05D005240 ORTHO05D006471 1.4e-32 143.3 168 44.6
Pp3c27_2400 Physcomitrium patens HOM05D005240 ORTHO05D006471 1.9e-32 142.9 167 43.7
CAN.G492.51 Capsicum annuum HOM05D005240 ORTHO05D006471 2.5e-32 142.5 153 48.4
Cre08.g378650 Chlamydomonas reinhardtii HOM05D005240 ORTHO05D006471 2.5e-32 142.5 150 48.7
AUR62043640 Chenopodium quinoa HOM05D005240 ORTHO05D006471 3.2e-32 142.1 175 42.3
HPP92_007585 Vanilla planifolia HOM05D005240 ORTHO05D006471 3.2e-32 142.1 168 42.9
Medtr1g095900 Medicago truncatula HOM05D005240 ORTHO05D006471 4.2e-32 141.7 169 43.2
Sabra10G0168200 Salix brachista HOM05D005240 ORTHO05D006471 9.3e-32 140.6 164 44.5
Actinidia38251 Actinidia chinensis HOM05D005240 ORTHO05D006471 1.2e-31 140.2 169 44.4
COL.COLO4_23732 Corchorus olitorius HOM05D005240 ORTHO05D006471 2.1e-31 139.4 165 42.4
MBI16_g46203_MAGBIO Magnolia biondii HOM05D005240 ORTHO05D006471 2.1e-31 139.4 194 39.7
PSO210G3376 Papaver somniferum HOM05D005240 ORTHO05D006471 2.7e-31 139.0 171 40.4
CsaV3_7G024930 Cucumis sativus L. HOM05D005240 ORTHO05D006471 3.6e-31 138.7 167 40.7
C04p64800 Brassica napus HOM05D005240 ORTHO05D006471 4.6e-31 138.3 168 41.7
BolC4t27957H Brassica oleracea HOM05D005240 ORTHO05D006471 4.6e-31 138.3 168 41.7
AL4G31930 Arabidopsis lyrata HOM05D005240 ORTHO05D006471 1.0e-30 137.1 167 41.9
CBR_g12600 Chara braunii HOM05D005240 ORTHO05D006471 3.0e-30 135.6 185 42.2
Rhsim10G0162300 Rhododendron simsii HOM05D005240 ORTHO05D006471 3.0e-30 135.6 160 43.1
BcaB06g28875 Brassica carinata HOM05D005240 ORTHO05D006471 2.2e-28 129.4 161 41.6
vmacro17506 Vaccinium macrocarpon HOM05D005240 ORTHO05D006471 2.8e-28 129.0 181 42.5
Sed0007370 Sechium edule HOM05D005240 ORTHO05D006471 4.8e-28 128.3 171 38.6
PSO210G2334 Papaver somniferum HOM05D005240 ORTHO05D006471 6.3e-28 127.9 160 40.0
Aa31LG7G14930 Aethionema arabicum HOM05D005240 ORTHO05D006471 4.1e-27 125.2 161 40.4
Aa31LG7G14960 Aethionema arabicum HOM05D005240 ORTHO05D006471 9.1e-27 124.0 162 42.0
ClCG09G009820 Citrullus lanatus HOM05D005240 ORTHO05D006471 4.5e-26 121.7 149 45.6
Sc09g0006770 Simmondsia chinensis HOM05D005240 ORTHO05D006471 4.5e-26 121.7 149 43.0
Dinv31345 Davidia involucrata HOM05D005240 ORTHO05D006471 6.5e-25 117.9 124 48.4
SMO330G0037 Selaginella moellendorffii HOM05D005240 ORTHO05D006471 3.2e-24 115.5 53 100.0
PRCOL_00006731 Prasinoderma coloniale HOM05D005240 ORTHO05D006471 9.4e-24 114.0 158 41.1
Lj8C95T7 Lonicera japonica HOM05D005240 ORTHO05D006471 1.5e-21 106.7 122 45.9
TPR.G10956 Trifolium pratense HOM05D005240 ORTHO05D006471 1.3e-20 103.6 121 44.6
unitig_0.g188 Utricularia gibba HOM05D005240 ORTHO05D006471 9.1e-19 97.4 101 43.6
TPR.G15475 Trifolium pratense HOM05D005240 ORTHO05D006471 1.5e-18 96.7 122 40.2
Haze_16935 Corylus avellana HOM05D005240 ORTHO05D006471 4.5e-18 95.1 163 34.4
Oeu057235.1 Olea europaea HOM05D005240 ORTHO05D006471 4.5e-18 95.1 113 43.4
CARHR130090 Cardamine hirsuta HOM05D005240 ORTHO05D006471 7.2e-16 87.8 108 44.4
arahy.Tifrunner.gnm1.ann1.ZWA97R Arachis hypogaea HOM05D005240 ORTHO05D006471 1.5e-13 80.1 115 35.7
arahy.Tifrunner.gnm1.ann1.65Y6VJ Arachis hypogaea HOM05D005240 ORTHO05D006471 1.3e-12 77.0 152 32.2
FAN01G3056 Fragaria x ananassa HOM05D005240 ORTHO05D006471 1.3e-12 77.0 49 73.5


User provided reference genes

Program Settings