Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO329G0081 Selaginella moellendorffii HOM05D006562 ORTHO05D008230 0.0e+00 1109.4 566 100.0
Mapoly0004s0213 Marchantia polymorpha HOM05D006562 ORTHO05D008230 1.0e-100 371.7 560 39.5
Pp3c8_14180 Physcomitrium patens HOM05D006562 ORTHO05D008230 2.7e-98 363.6 472 42.6
GSVIVG01018736001 Vitis vinifera HOM05D006562 ORTHO05D008230 2.8e-95 353.6 489 40.3
ATR0712G114 Amborella trichopoda HOM05D006562 ORTHO05D008230 2.0e-93 347.4 465 42.2
Aqoxy5G01815 Aquilegia oxysepala HOM05D006562 ORTHO05D008230 2.0e-93 347.4 524 39.5
Glyma.16G124500 Glycine max HOM05D006562 ORTHO05D008230 2.6e-93 347.1 489 41.3
arahy.Tifrunner.gnm1.ann1.X2JQ1G Arachis hypogaea HOM05D006562 ORTHO05D008230 5.9e-93 345.9 490 41.6
CiPaw.07G060900 Carya illinoinensis HOM05D006562 ORTHO05D008230 1.3e-92 344.7 491 39.5
DCAR_014038 Daucus carota HOM05D006562 ORTHO05D008230 1.3e-92 344.7 473 41.9
Thecc.01G014800 Theobroma cacao HOM05D006562 ORTHO05D008230 6.5e-92 342.4 555 37.7
Sc16g0001970 Simmondsia chinensis HOM05D006562 ORTHO05D008230 8.5e-92 342.0 545 39.4
arahy.Tifrunner.gnm1.ann1.6MN492 Arachis hypogaea HOM05D006562 ORTHO05D008230 5.5e-91 339.3 492 41.3
Os03g0242100 Oryza sativa ssp. japonica HOM05D006562 ORTHO05D008230 7.2e-91 339.0 523 37.9
COL.COLO4_22460 Corchorus olitorius HOM05D006562 ORTHO05D008230 1.2e-90 338.2 552 37.0
MD15G1242700 Malus domestica HOM05D006562 ORTHO05D008230 2.7e-90 337.0 527 39.3
MBI05_g23389_MAGBIO Magnolia biondii HOM05D006562 ORTHO05D008230 4.7e-90 336.3 504 37.9
Cfa007000 Carpinus fangiana HOM05D006562 ORTHO05D008230 6.1e-90 335.9 517 38.3
Lj4g0007150 Lotus japonicus HOM05D006562 ORTHO05D008230 6.1e-90 335.9 491 39.5
Carub.0008s2836 Capsella rubella HOM05D006562 ORTHO05D008230 7.9e-90 335.5 564 37.8
HPP92_022171 Vanilla planifolia HOM05D006562 ORTHO05D008230 1.0e-89 335.1 495 39.8
Potri.005G111000 Populus trichocarpa HOM05D006562 ORTHO05D008230 1.4e-89 334.7 533 38.3
FAN28G2818 Fragaria x ananassa HOM05D006562 ORTHO05D008230 1.8e-89 334.3 543 37.9
FvH4_1g11470 Fragaria vesca HOM05D006562 ORTHO05D008230 5.2e-89 332.8 523 38.4
QL06p051072 Quercus lobata HOM05D006562 ORTHO05D008230 5.2e-89 332.8 485 39.6
CsaV3_6G047340 Cucumis sativus L. HOM05D006562 ORTHO05D008230 8.8e-89 332.0 485 39.4
Migut.L00910 Erythranthe guttata HOM05D006562 ORTHO05D008230 8.8e-89 332.0 558 37.8
TAR376G1060 Trochodendron aralioides HOM05D006562 ORTHO05D008230 8.8e-89 332.0 493 38.9
AL8G45460 Arabidopsis lyrata HOM05D006562 ORTHO05D008230 1.1e-88 331.6 546 37.2
Sabra05G0091000 Salix brachista HOM05D006562 ORTHO05D008230 1.5e-88 331.3 491 38.9
AUR62003339 Chenopodium quinoa HOM05D006562 ORTHO05D008230 2.0e-88 330.9 503 40.2
AUR62029498 Chenopodium quinoa HOM05D006562 ORTHO05D008230 2.0e-88 330.9 488 40.4
Eucgr.I02333 Eucalyptus grandis HOM05D006562 ORTHO05D008230 2.0e-88 330.9 537 39.3
FAN19G2077 Fragaria x ananassa HOM05D006562 ORTHO05D008230 2.0e-88 330.9 523 38.2
Lj2A480G48 Lonicera japonica HOM05D006562 ORTHO05D008230 2.0e-88 330.9 522 38.1
Dinv33663 Davidia involucrata HOM05D006562 ORTHO05D008230 2.6e-88 330.5 457 40.5
Gorai.011G098200 Gossypium raimondii HOM05D006562 ORTHO05D008230 2.6e-88 330.5 534 38.0
SGA_v2.0_scaffold229G43296 Striga asiatica HOM05D006562 ORTHO05D008230 4.4e-88 329.7 516 38.8
AT5G66130 Arabidopsis thaliana HOM05D006562 ORTHO05D008230 5.7e-88 329.3 547 38.0
CANSAT25G3480 Cannabis sativa HOM05D006562 ORTHO05D008230 5.7e-88 329.3 618 35.3
Psat4g101960 Pisum sativum HOM05D006562 ORTHO05D008230 5.7e-88 329.3 483 39.3
Gohir.A10G098700 Gossypium hirsutum HOM05D006562 ORTHO05D008230 7.4e-88 328.9 532 38.0
EL10Ac6g15524 Beta vulgaris HOM05D006562 ORTHO05D008230 9.7e-88 328.6 514 38.9
RcHm_v2.0_Chr2g0099051 Rosa chinensis HOM05D006562 ORTHO05D008230 9.7e-88 328.6 527 38.3
VMungo0251G0646 Vigna mungo HOM05D006562 ORTHO05D008230 9.7e-88 328.6 491 39.9
TPR.G19508 Trifolium pratense HOM05D006562 ORTHO05D008230 1.7e-87 327.8 486 39.5
Ca_03628_v3 Cicer arietinum L. HOM05D006562 ORTHO05D008230 2.8e-87 327.0 486 39.3
HanXRQChr15g0483891 Helianthus annuus HOM05D006562 ORTHO05D008230 2.8e-87 327.0 554 35.6
Gohir.D10G089300 Gossypium hirsutum HOM05D006562 ORTHO05D008230 6.3e-87 325.9 531 37.7
Phvul.003G265000 Phaseolus vulgaris HOM05D006562 ORTHO05D008230 8.2e-87 325.5 491 39.1
Haze_03732 Corylus avellana HOM05D006562 ORTHO05D008230 1.8e-86 324.3 493 38.5
FAN23G1005 Fragaria x ananassa HOM05D006562 ORTHO05D008230 1.8e-86 324.3 516 38.0
Medtr8g075250 Medicago truncatula HOM05D006562 ORTHO05D008230 1.8e-86 324.3 486 38.7
PGR119G1624 Punica granatum HOM05D006562 ORTHO05D008230 1.8e-86 324.3 518 38.8
Nitab4.5_0001892g0110 Nicotiana tabacum HOM05D006562 ORTHO05D008230 2.4e-86 323.9 518 37.8
Manes.01G148500 Manihot esculenta HOM05D006562 ORTHO05D008230 5.3e-86 322.8 545 36.1
TWI53G1373 Tripterygium wilfordii HOM05D006562 ORTHO05D008230 5.3e-86 322.8 517 38.9
CARHR281620 Cardamine hirsuta HOM05D006562 ORTHO05D008230 7.0e-86 322.4 560 37.1
PGSC0003DMG400003647 Solanum tuberosum HOM05D006562 ORTHO05D008230 9.1e-86 322.0 477 39.0
vmacro22151 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 1.6e-85 321.2 497 38.4
Cc07_g11050 Coffea canephora HOM05D006562 ORTHO05D008230 2.0e-85 320.9 467 39.0
Sp2g30560 Schrenkiella parvula HOM05D006562 ORTHO05D008230 2.0e-85 320.9 531 37.5
vmacro22192 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 2.0e-85 320.9 497 38.4
Sed0025600 Sechium edule HOM05D006562 ORTHO05D008230 4.5e-85 319.7 489 37.8
Cpa.g.sc6.285 Carica papaya HOM05D006562 ORTHO05D008230 5.9e-85 319.3 486 39.1
Actinidia22955 Actinidia chinensis HOM05D006562 ORTHO05D008230 7.7e-85 318.9 493 38.1
Sopen02g028380 Solanum pennellii HOM05D006562 ORTHO05D008230 2.2e-84 317.4 522 36.8
Atru.chr3.853 Acer truncatum HOM05D006562 ORTHO05D008230 2.9e-84 317.0 568 34.3
ClCG01G020460 Citrullus lanatus HOM05D006562 ORTHO05D008230 2.9e-84 317.0 554 37.0
Solyc02g083600.4 Solanum lycopersicum HOM05D006562 ORTHO05D008230 3.8e-84 316.6 524 36.8
PSO170G3776 Papaver somniferum HOM05D006562 ORTHO05D008230 1.5e-83 314.7 537 37.4
Thhalv10003881m.g Eutrema salsugineum HOM05D006562 ORTHO05D008230 5.5e-83 312.8 556 36.2
Zm00001eb398900 Zea mays HOM05D006562 ORTHO05D008230 1.2e-82 311.6 455 38.9
CSS0025685 Camellia sinensis var. sinensis HOM05D006562 ORTHO05D008230 2.1e-82 310.8 497 37.4
unitig_37.g12438 Utricularia gibba HOM05D006562 ORTHO05D008230 3.6e-82 310.1 544 37.1
SalBow5G1234 Salvia bowleyana HOM05D006562 ORTHO05D008230 4.7e-82 309.7 555 36.2
Ah.03g149120 Amaranthus hybridus HOM05D006562 ORTHO05D008230 6.1e-82 309.3 476 39.7
BcaC04g23114 Brassica carinata HOM05D006562 ORTHO05D008230 6.1e-82 309.3 541 36.6
Ciclev10025220m.g Citrus clementina HOM05D006562 ORTHO05D008230 1.4e-81 308.1 514 36.8
Lsat_1_v5_gn_3_72080 Lactuca sativa HOM05D006562 ORTHO05D008230 1.4e-81 308.1 554 35.0
Aa31LG1G14620 Aethionema arabicum HOM05D006562 ORTHO05D008230 2.3e-81 307.4 518 37.5
PSO700G0294 Papaver somniferum HOM05D006562 ORTHO05D008230 3.0e-81 307.0 510 37.1
Oeu048479.1 Olea europaea HOM05D006562 ORTHO05D008230 5.2e-81 306.2 530 36.6
BcaB04g20123 Brassica carinata HOM05D006562 ORTHO05D008230 8.8e-81 305.4 529 37.4
CAN.G1274.29 Capsicum annuum HOM05D006562 ORTHO05D008230 2.6e-80 303.9 457 37.9
BraA09t36658Z Brassica rapa HOM05D006562 ORTHO05D008230 3.3e-80 303.5 546 35.9
Nitab4.5_0003187g0030 Nicotiana tabacum HOM05D006562 ORTHO05D008230 3.3e-80 303.5 483 37.7
Lalb_Chr16g0391391 Lupinus albus HOM05D006562 ORTHO05D008230 1.3e-79 301.6 494 38.3
Peaxi162Scf00328g00616 Petunia axillaris HOM05D006562 ORTHO05D008230 5.3e-78 296.2 536 35.8
C09p12020 Brassica napus HOM05D006562 ORTHO05D008230 7.0e-78 295.8 553 35.1
A09p10140 Brassica napus HOM05D006562 ORTHO05D008230 4.5e-77 293.1 513 36.5
BolC9t54092H Brassica oleracea HOM05D006562 ORTHO05D008230 5.9e-77 292.7 540 35.4
Duzib187G1447 Durio zibethinus HOM05D006562 ORTHO05D008230 1.7e-76 291.2 533 36.6
Hund16502 Selenicereus undatus HOM05D006562 ORTHO05D008230 1.7e-76 291.2 422 40.0
MELO3C007925.2 Cucumis melo HOM05D006562 ORTHO05D008230 2.5e-75 287.3 571 34.3
Prupe.7G171500 Prunus persica HOM05D006562 ORTHO05D008230 3.0e-73 280.4 442 38.2
SHI08537 Sapria himalayana HOM05D006562 ORTHO05D008230 4.0e-73 280.0 412 39.8
MSTRG.15581 Avicennia marina HOM05D006562 ORTHO05D008230 1.1e-70 271.9 418 38.0
ECA246G3730 Erigeron canadensis HOM05D006562 ORTHO05D008230 3.1e-70 270.4 487 35.5
Rhsim10G0209300 Rhododendron simsii HOM05D006562 ORTHO05D008230 3.4e-64 250.4 460 33.0
HPP92_022170 Vanilla planifolia HOM05D006562 ORTHO05D008230 2.1e-58 231.1 409 37.4
MCO01G428 Micromonas commoda HOM05D006562 ORTHO05D008230 3.6e-50 203.8 586 29.0
CDE02G3565 Ceratophyllum demersum HOM05D006562 ORTHO05D008230 8.0e-50 202.6 513 28.5
SEGI_24182 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 6.4e-47 193.0 321 37.7
PRCOL_00000425 Prasinoderma coloniale HOM05D006562 ORTHO05D008230 2.0e-40 171.4 485 30.9
Cre03.g196600 Chlamydomonas reinhardtii HOM05D006562 ORTHO05D008230 4.1e-38 163.7 680 24.4
Dinv33664 Davidia involucrata HOM05D006562 ORTHO05D008230 2.9e-31 141.0 242 34.7
CBR_g51010 Chara braunii HOM05D006562 ORTHO05D008230 3.0e-28 131.0 370 30.3
FAN26G2549 Fragaria x ananassa HOM05D006562 ORTHO05D008230 2.9e-23 114.4 193 36.3
Hma1.2p1_0315F.1_g122300 Hydrangea macrophylla HOM05D006562 ORTHO05D008230 1.5e-19 102.1 153 41.8
SEGI_14672 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 2.8e-10 71.2 112 38.4
Lsat_1_v5_gn_5_17820 Lactuca sativa HOM05D002511 ORTHO05D019442 4.5e-08 63.9 94 35.1
Os11g0572100 Oryza sativa ssp. japonica HOM05D004977 ORTHO05D006454 1.4e-06 58.9 286 22.0
Hund31353 Selenicereus undatus HOM05D006562 ORTHO05D008230 1.9e-06 58.5 53 47.2
Hund31354 Selenicereus undatus HOM05D006562 ORTHO05D008230 1.9e-06 58.5 53 47.2
Sopen10g019740 Solanum pennellii HOM05D006562 ORTHO05D008230 1.9e-06 58.5 63 42.9
Hund31048 Selenicereus undatus HOM05D006562 ORTHO05D008230 4.2e-06 57.4 53 47.2
Hund31049 Selenicereus undatus HOM05D006562 ORTHO05D008230 4.2e-06 57.4 53 47.2


User provided reference genes

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