Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO329G0060 Selaginella moellendorffii HOM05D008307 ORTHO05D010374 3.3e-296 1021.1 596 100.0
Pp3c5_17310 Physcomitrium patens HOM05D008307 ORTHO05D010374 1.6e-40 171.8 329 33.4
Mapoly0004s0145 Marchantia polymorpha HOM05D008307 ORTHO05D010374 2.1e-40 171.4 615 28.5
Pp3c6_16530 Physcomitrium patens HOM05D008307 ORTHO05D010374 7.9e-40 169.5 646 26.3
AagrBONN_evm.TU.Sc2ySwM_369.432 Anthoceros agrestis HOM05D008307 ORTHO05D010374 7.0e-36 156.4 329 31.6
SEGI_00673 Sequoiadendron giganteum HOM05D008307 ORTHO05D010374 2.4e-28 131.3 329 29.5
THA.LOC104822237 Tarenaya hassleriana HOM05D008307 ORTHO05D010374 4.5e-27 127.1 294 31.0
SMO165G0083 Selaginella moellendorffii HOM05D008307 ORTHO05D010374 1.0e-26 125.9 688 22.1
ATR0736G143 Amborella trichopoda HOM05D008307 ORTHO05D010374 4.2e-25 120.6 363 29.5
RcHm_v2.0_Chr4g0393941 Rosa chinensis HOM05D008307 ORTHO05D010374 2.0e-22 111.7 320 29.4
SEGI_31757 Sequoiadendron giganteum HOM05D008757 ORTHO05D010583 2.0e-22 111.7 198 35.4
QL06p018536 Quercus lobata HOM05D008307 ORTHO05D010374 2.6e-22 111.3 319 29.8
MBI07_g31095_MAGBIO Magnolia biondii HOM05D008307 ORTHO05D010374 9.8e-22 109.4 383 28.5
Aqoxy7G00920 Aquilegia oxysepala HOM05D008307 ORTHO05D010374 6.3e-21 106.7 329 27.7
MD16G1220900 Malus domestica HOM05D008307 ORTHO05D010374 6.3e-21 106.7 356 27.2
Potri.010G070001 Populus trichocarpa HOM05D008307 ORTHO05D010374 6.3e-21 106.7 333 26.4
Solyc09g090290.3 Solanum lycopersicum HOM05D008307 ORTHO05D010374 1.1e-20 105.9 307 28.3
Dinv29844 Davidia involucrata HOM05D008307 ORTHO05D010374 1.8e-20 105.1 313 28.4
Haze_11405 Corylus avellana HOM05D008307 ORTHO05D010374 7.0e-20 103.2 306 29.1
Rhsim04G0177000 Rhododendron simsii HOM05D008307 ORTHO05D010374 7.0e-20 103.2 332 27.1
TWI73G0959 Tripterygium wilfordii HOM05D008307 ORTHO05D010374 7.0e-20 103.2 320 27.8
Cfa014722 Carpinus fangiana HOM05D008307 ORTHO05D010374 1.2e-19 102.4 304 28.6
Migut.N00284 Erythranthe guttata HOM05D008307 ORTHO05D010374 1.2e-19 102.4 322 26.4
DCAR_027325 Daucus carota HOM05D008307 ORTHO05D010374 7.7e-19 99.8 355 25.6
Peaxi162Scf00041g00209 Petunia axillaris HOM05D008307 ORTHO05D010374 1.7e-18 98.6 329 27.4
FvH4_4g03920 Fragaria vesca HOM05D008307 ORTHO05D010374 8.5e-18 96.3 319 27.3
PGR031G2080 Punica granatum HOM05D008307 ORTHO05D010374 1.1e-17 95.9 134 38.8
PGSC0003DMG400017215 Solanum tuberosum HOM05D008307 ORTHO05D010374 2.5e-17 94.7 134 37.3
FAN22G1022 Fragaria x ananassa HOM05D000478 ORTHO05D010374 4.2e-17 94.0 335 25.1
Actinidia35796 Actinidia chinensis HOM05D008307 ORTHO05D010374 5.5e-17 93.6 315 26.3
Prupe.1G041400 Prunus persica HOM05D008307 ORTHO05D010374 9.4e-17 92.8 151 35.8
CARHR099340 Cardamine hirsuta HOM05D008307 ORTHO05D010374 2.7e-16 91.3 319 26.6
Sopen09g033190 Solanum pennellii HOM05D008307 ORTHO05D010374 1.0e-15 89.4 134 35.8
CSS0044876 Camellia sinensis var. sinensis HOM05D008307 ORTHO05D010374 1.8e-15 88.6 181 34.3
DCAR_024261 Daucus carota HOM05D008307 ORTHO05D010374 2.3e-15 88.2 180 32.8
Nitab4.5_0000044g0470 Nicotiana tabacum HOM05D008307 ORTHO05D010374 3.0e-15 87.8 300 26.7
TAR365G0480 Trochodendron aralioides HOM05D008307 ORTHO05D010374 3.0e-15 87.8 302 27.2
CAN.G220.11 Capsicum annuum HOM05D008307 ORTHO05D010374 2.6e-14 84.7 304 25.3
AL3G38030 Arabidopsis lyrata HOM05D008307 ORTHO05D010374 3.4e-14 84.3 142 36.6
Nitab4.5_0007280g0010 Nicotiana tabacum HOM05D008307 ORTHO05D010374 1.3e-13 82.4 311 26.0
Carub.0003s2363 Capsella rubella HOM05D008307 ORTHO05D010374 1.7e-13 82.0 191 35.6
A07p09070 Brassica napus HOM05D008307 ORTHO05D010374 4.9e-13 80.5 154 33.1
BraA07t28701Z Brassica rapa HOM05D008307 ORTHO05D010374 6.3e-13 80.1 154 32.5
AT3G23370 Arabidopsis thaliana HOM05D008307 ORTHO05D010374 8.3e-13 79.7 209 30.6
BcaC06g35512 Brassica carinata HOM05D008307 ORTHO05D010374 1.1e-12 79.3 154 33.1
C07p14040 Brassica napus HOM05D008307 ORTHO05D010374 1.1e-12 79.3 154 33.1
BolC7t41901H Brassica oleracea HOM05D008307 ORTHO05D010374 1.1e-12 79.3 154 33.1
FAN17G2370 Fragaria x ananassa HOM05D000478 ORTHO05D010374 3.1e-12 77.8 169 32.0
Thhalv10020149m.g Eutrema salsugineum HOM05D008307 ORTHO05D010374 5.4e-12 77.0 198 30.3
vmacro08510 Vaccinium macrocarpon HOM05D008307 ORTHO05D010374 9.1e-12 76.3 135 38.5
COL.COLO4_15896 Corchorus olitorius HOM05D008307 ORTHO05D010374 5.9e-11 73.6 253 26.5
Cc03_g05710 Coffea canephora HOM05D008307 ORTHO05D010374 1.6e-08 65.5 139 32.4
Gorai.011G175900 Gossypium raimondii HOM05D008307 ORTHO05D010374 6.1e-08 63.5 284 26.1
FAN12G4262 Fragaria x ananassa HOM05D000478 ORTHO05D010374 3.0e-07 61.2 137 32.1
Aqoxy3G01114 Aquilegia oxysepala HOM05D008757 ORTHO05D010583 2.0e-06 58.5 135 28.1
SGA_v2.0_scaffold31G12662 Striga asiatica HOM05D008307 ORTHO05D010374 2.0e-06 58.5 142 30.3


User provided reference genes

Program Settings