Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 1.7e-79 299.3 153 100.0
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 3.0e-52 208.8 151 70.9
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 6.8e-52 207.6 154 68.8
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 8.8e-52 207.2 154 68.8
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 1.2e-51 206.8 154 66.9
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 1.2e-51 206.8 154 68.2
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 1.2e-51 206.8 154 66.9
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 2.0e-51 206.1 153 68.0
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 3.4e-51 205.3 154 66.9
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 3.4e-51 205.3 154 66.9
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 3.4e-51 205.3 154 67.5
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 3.4e-51 205.3 154 67.5
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 4.4e-51 204.9 154 66.2
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 4.4e-51 204.9 154 67.5
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 5.7e-51 204.5 154 65.6
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 7.5e-51 204.1 154 66.2
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 7.5e-51 204.1 154 67.5
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 9.8e-51 203.8 154 66.2
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 9.8e-51 203.8 154 65.6
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 9.8e-51 203.8 154 65.6
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 9.8e-51 203.8 154 66.2
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 9.8e-51 203.8 154 66.2
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 9.8e-51 203.8 154 66.9
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 1.3e-50 203.4 154 66.2
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 1.3e-50 203.4 154 65.6
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 1.7e-50 203.0 152 69.1
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 1.7e-50 203.0 154 66.2
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 1.7e-50 203.0 154 66.9
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 2.2e-50 202.6 154 65.6
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 2.2e-50 202.6 154 65.6
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 2.8e-50 202.2 154 65.6
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 3.7e-50 201.8 154 66.9
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 3.7e-50 201.8 154 67.5
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 3.7e-50 201.8 154 66.2
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 3.7e-50 201.8 154 65.6
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 4.8e-50 201.4 154 64.9
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 4.8e-50 201.4 154 65.6
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 4.8e-50 201.4 154 65.6
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 4.8e-50 201.4 154 66.2
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 4.8e-50 201.4 154 65.6
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 4.8e-50 201.4 154 67.5
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 4.8e-50 201.4 154 67.5
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 4.8e-50 201.4 154 67.5
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 6.3e-50 201.1 154 66.9
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 8.3e-50 200.7 154 65.6
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 8.3e-50 200.7 154 65.6
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 8.3e-50 200.7 154 66.2
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 1.1e-49 200.3 154 64.9
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 1.1e-49 200.3 154 65.6
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 1.1e-49 200.3 154 65.6
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 1.1e-49 200.3 154 66.9
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 1.4e-49 199.9 154 64.9
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 1.4e-49 199.9 154 66.2
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 1.4e-49 199.9 153 64.7
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 1.4e-49 199.9 153 64.7
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 1.4e-49 199.9 153 64.7
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 1.8e-49 199.5 152 67.1
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 1.8e-49 199.5 152 65.8
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.8e-49 199.5 149 66.4
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.8e-49 199.5 149 66.4
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 2.4e-49 199.1 154 65.6
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 3.1e-49 198.7 149 66.4
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 3.1e-49 198.7 154 65.6
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 3.1e-49 198.7 154 66.2
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 4.1e-49 198.4 154 65.6
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 4.1e-49 198.4 154 65.6
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 4.1e-49 198.4 154 64.3
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 5.4e-49 198.0 154 63.0
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 7.0e-49 197.6 154 66.9
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 7.0e-49 197.6 154 64.3
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 7.0e-49 197.6 155 66.5
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 9.1e-49 197.2 154 65.6
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 9.1e-49 197.2 154 64.9
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 2.0e-48 196.1 154 63.0
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 2.0e-48 196.1 154 64.9
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 2.7e-48 195.7 150 66.0
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 3.5e-48 195.3 154 63.0
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 3.5e-48 195.3 153 64.7
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 3.5e-48 195.3 152 62.5
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 4.5e-48 194.9 154 63.6
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 4.5e-48 194.9 154 65.6
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 5.9e-48 194.5 154 63.6
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 5.9e-48 194.5 154 62.3
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 7.7e-48 194.1 153 63.4
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 7.7e-48 194.1 154 62.3
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 7.7e-48 194.1 155 63.9
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 7.7e-48 194.1 155 65.2
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 1.7e-47 193.0 153 65.4
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 2.2e-47 192.6 152 63.8
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 2.2e-47 192.6 151 65.6
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 5.0e-47 191.4 153 64.7
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 8.5e-47 190.7 154 63.6
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 1.1e-46 190.3 151 61.6
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 1.1e-46 190.3 152 62.5
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 1.5e-46 189.9 152 63.2
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 1.5e-46 189.9 153 64.1
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 2.5e-46 189.1 142 65.5
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 4.2e-46 188.3 154 62.3
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 7.2e-46 187.6 146 66.4
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 9.4e-46 187.2 153 65.4
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 9.4e-46 187.2 151 61.6
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 2.1e-45 186.0 151 61.6
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 3.6e-45 185.3 153 63.4
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 4.7e-45 184.9 154 60.4
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 8.0e-45 184.1 153 64.1
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 2.3e-44 182.6 140 64.3
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 8.8e-44 180.6 153 60.8
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 4.4e-43 178.3 141 63.1
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 1.3e-42 176.8 125 67.2
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 8.3e-42 174.1 131 70.2
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 2.4e-41 172.6 118 71.2
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 3.1e-41 172.2 120 69.2
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 4.1e-41 171.8 141 60.3
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 9.2e-41 170.6 131 64.1
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 5.9e-40 167.9 133 60.2
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 1.7e-39 166.4 141 58.9
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 2.3e-39 166.0 121 69.4
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 9.5e-38 160.6 106 74.5
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 2.1e-37 159.5 120 67.5
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 3.6e-37 158.7 122 64.8
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 1.8e-36 156.4 108 70.4
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 5.2e-36 154.8 106 71.7
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 7.8e-32 141.0 124 59.7
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 1.2e-27 127.1 91 68.1
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 1.3e-26 123.6 123 48.8
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 5.4e-09 65.1 99 41.4


User provided reference genes

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