Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO328G0006 Selaginella moellendorffii HOM05D006929 ORTHO05D008646 0.0e+00 1543.5 780 100.0
SMO201G0152 Selaginella moellendorffii HOM05D006929 ORTHO05D008646 0.0e+00 1414.1 833 88.1
SEGI_26365 Sequoiadendron giganteum HOM05D006929 ORTHO05D008646 1.6e-210 736.9 835 48.6
ATR0661G330 Amborella trichopoda HOM05D006929 ORTHO05D008646 1.3e-188 664.1 834 44.1
PSO210G4353 Papaver somniferum HOM05D006929 ORTHO05D008646 5.6e-187 658.7 831 44.4
TAR381G0226 Trochodendron aralioides HOM05D006929 ORTHO05D008646 9.6e-187 657.9 818 45.1
PSO170G0764 Papaver somniferum HOM05D006929 ORTHO05D008646 1.6e-186 657.1 832 44.4
COL.COLO4_22488 Corchorus olitorius HOM05D006929 ORTHO05D008646 2.6e-184 649.8 837 43.5
Thecc.01G012300 Theobroma cacao HOM05D006929 ORTHO05D008646 7.6e-184 648.3 840 44.3
Aqoxy5G01127 Aquilegia oxysepala HOM05D006929 ORTHO05D008646 1.0e-183 647.9 815 45.0
PGR119G0759 Punica granatum HOM05D006929 ORTHO05D008646 1.7e-183 647.1 834 44.8
Duzib264G0985 Durio zibethinus HOM05D006929 ORTHO05D008646 8.4e-183 644.8 839 44.0
MBI05_g00179_MAGBIO Magnolia biondii HOM05D006929 ORTHO05D008646 2.5e-182 643.3 839 44.8
Duzib147G1132 Durio zibethinus HOM05D006929 ORTHO05D008646 3.2e-182 642.9 839 43.5
Sc07g0001190 Simmondsia chinensis HOM05D006929 ORTHO05D008646 4.2e-182 642.5 846 43.9
Rhsim08G0030500 Rhododendron simsii HOM05D006929 ORTHO05D008646 1.3e-180 637.5 836 44.3
QL06p051910 Quercus lobata HOM05D006929 ORTHO05D008646 8.7e-180 634.8 817 43.7
Haze_03709 Corylus avellana HOM05D006929 ORTHO05D008646 1.5e-179 634.0 814 44.8
ECA238G2047 Erigeron canadensis HOM05D006929 ORTHO05D008646 3.3e-179 632.9 841 42.3
Gorai.007G191000 Gossypium raimondii HOM05D006929 ORTHO05D008646 3.3e-179 632.9 816 44.2
Prupe.7G174200 Prunus persica HOM05D006929 ORTHO05D008646 3.3e-179 632.9 842 43.5
Gohir.D11G179100 Gossypium hirsutum HOM05D006929 ORTHO05D008646 4.3e-179 632.5 816 44.2
TWI73G0481 Tripterygium wilfordii HOM05D006929 ORTHO05D008646 4.3e-179 632.5 837 42.3
CSS0014208 Camellia sinensis var. sinensis HOM05D006929 ORTHO05D008646 7.4e-179 631.7 820 44.1
CSS0041887 Camellia sinensis var. sinensis HOM05D006929 ORTHO05D008646 7.4e-179 631.7 820 44.1
Cpa.g.sc6.307 Carica papaya HOM05D006929 ORTHO05D008646 7.4e-179 631.7 836 42.0
Cfa007024 Carpinus fangiana HOM05D006929 ORTHO05D008646 7.4e-179 631.7 815 44.4
TWI53G0685 Tripterygium wilfordii HOM05D006929 ORTHO05D008646 7.4e-179 631.7 830 43.3
MSTRG.21326 Avicennia marina HOM05D006929 ORTHO05D008646 9.7e-179 631.3 841 42.3
Oeu032040.1 Olea europaea HOM05D006929 ORTHO05D008646 9.7e-179 631.3 839 43.6
Atru.chr3.900 Acer truncatum HOM05D006929 ORTHO05D008646 1.6e-178 630.6 815 43.3
Cc07_g11260 Coffea canephora HOM05D006929 ORTHO05D008646 4.8e-178 629.0 843 42.5
Solyc02g083430.1 Solanum lycopersicum HOM05D006929 ORTHO05D008646 1.1e-177 627.9 843 43.1
CiPaw.07G062900 Carya illinoinensis HOM05D006929 ORTHO05D008646 1.4e-177 627.5 834 43.5
FAN26G2428 Fragaria x ananassa HOM05D006929 ORTHO05D008646 1.4e-177 627.5 834 42.9
Gohir.A11G172100 Gossypium hirsutum HOM05D006929 ORTHO05D008646 1.8e-177 627.1 816 43.4
Ciclev10024912m.g Citrus clementina HOM05D006929 ORTHO05D008646 2.4e-177 626.7 833 43.3
Sopen02g028220 Solanum pennellii HOM05D006929 ORTHO05D008646 2.4e-177 626.7 843 42.7
CAN.G890.36 Capsicum annuum HOM05D006929 ORTHO05D008646 5.3e-177 625.5 844 41.9
ClCG01G020570 Citrullus lanatus HOM05D006929 ORTHO05D008646 5.3e-177 625.5 815 43.3
FAN23G2594 Fragaria x ananassa HOM05D006929 ORTHO05D008646 5.3e-177 625.5 844 42.7
Nitab4.5_0006899g0010 Nicotiana tabacum HOM05D006929 ORTHO05D008646 6.9e-177 625.2 816 43.8
PGSC0003DMG400003658 Solanum tuberosum HOM05D006929 ORTHO05D008646 1.2e-176 624.4 844 42.9
FvH4_1g11170 Fragaria vesca HOM05D006929 ORTHO05D008646 1.3e-175 620.9 839 42.6
MD15G1238200 Malus domestica HOM05D006929 ORTHO05D008646 1.3e-175 620.9 832 43.9
CANSAT01G2329 Cannabis sativa HOM05D006929 ORTHO05D008646 1.7e-175 620.5 837 43.4
DCAR_011578 Daucus carota HOM05D006929 ORTHO05D008646 3.8e-175 619.4 854 41.5
FAN28G2763 Fragaria x ananassa HOM05D006929 ORTHO05D008646 5.0e-175 619.0 822 43.2
RcHm_v2.0_Chr2g0098461 Rosa chinensis HOM05D006929 ORTHO05D008646 5.0e-175 619.0 843 43.1
Lalb_Chr16g0391511 Lupinus albus HOM05D006929 ORTHO05D008646 8.5e-175 618.2 824 43.1
Lalb_Chr09g0334271 Lupinus albus HOM05D006929 ORTHO05D008646 1.1e-174 617.8 814 43.4
Potri.005G108600 Populus trichocarpa HOM05D006929 ORTHO05D008646 1.4e-174 617.5 837 41.9
Peaxi162Scf00328g00022 Petunia axillaris HOM05D006929 ORTHO05D008646 2.5e-174 616.7 844 42.3
Migut.D00696 Erythranthe guttata HOM05D006929 ORTHO05D008646 1.6e-173 614.0 847 42.1
CsaV3_6G047480 Cucumis sativus L. HOM05D006929 ORTHO05D008646 2.7e-173 613.2 818 42.3
SGA_v2.0_scaffold29G12165 Striga asiatica HOM05D006929 ORTHO05D008646 3.6e-173 612.8 831 41.8
Ah.02g129150 Amaranthus hybridus HOM05D006929 ORTHO05D008646 6.1e-173 612.1 835 43.1
MELO3C007939.2 Cucumis melo HOM05D006929 ORTHO05D008646 1.4e-172 610.9 836 41.6
Medtr8g074970 Medicago truncatula HOM05D006929 ORTHO05D008646 1.4e-172 610.9 832 42.9
Phvul.003G266800 Phaseolus vulgaris HOM05D006929 ORTHO05D008646 3.0e-172 609.8 849 41.7
Aa31LG6G12820 Aethionema arabicum HOM05D006929 ORTHO05D008646 8.8e-172 608.2 825 42.9
Lj4g0000234 Lotus japonicus HOM05D006929 ORTHO05D008646 8.8e-172 608.2 832 42.1
AUR62026231 Chenopodium quinoa HOM05D006929 ORTHO05D008646 1.5e-171 607.4 838 42.8
Ca_03636_v3 Cicer arietinum L. HOM05D006929 ORTHO05D008646 2.5e-171 606.7 837 42.5
AL7G15180 Arabidopsis lyrata HOM05D006929 ORTHO05D008646 3.3e-171 606.3 850 41.8
MD02G1124200 Malus domestica HOM05D006929 ORTHO05D008646 7.4e-171 605.1 837 42.9
Sed0020872 Sechium edule HOM05D006929 ORTHO05D008646 7.4e-171 605.1 843 41.9
THA.LOC104814667 Tarenaya hassleriana HOM05D006929 ORTHO05D008646 9.7e-171 604.7 837 41.6
arahy.Tifrunner.gnm1.ann1.66U8DG Arachis hypogaea HOM05D006929 ORTHO05D008646 1.3e-170 604.4 821 41.4
AT4G35870 Arabidopsis thaliana HOM05D006929 ORTHO05D008646 2.2e-170 603.6 836 42.0
Dinv40140 Davidia involucrata HOM05D006929 ORTHO05D008646 2.8e-170 603.2 803 42.7
Sabra05G0089000 Salix brachista HOM05D006929 ORTHO05D008646 4.8e-170 602.4 829 41.4
Psat4g102480 Pisum sativum HOM05D006929 ORTHO05D008646 6.3e-170 602.1 840 42.0
VMungo0251G3358 Vigna mungo HOM05D006929 ORTHO05D008646 1.4e-169 600.9 847 41.4
THA.LOC104819967 Tarenaya hassleriana HOM05D006929 ORTHO05D008646 3.1e-169 599.7 819 41.6
Zm00001eb402740 Zea mays HOM05D006929 ORTHO05D008646 3.1e-169 599.7 843 41.5
Potri.007G063700 Populus trichocarpa HOM05D006929 ORTHO05D008646 5.3e-169 599.0 832 41.8
Thhalv10024429m.g Eutrema salsugineum HOM05D006929 ORTHO05D008646 1.2e-168 597.8 836 42.0
Glyma.02G044800 Glycine max HOM05D006929 ORTHO05D008646 3.4e-168 596.3 821 41.8
BcaC01g00525 Brassica carinata HOM05D006929 ORTHO05D008646 1.0e-167 594.7 819 41.4
C03p80950 Brassica napus HOM05D006929 ORTHO05D008646 1.0e-167 594.7 819 41.4
BolC3t20354H Brassica oleracea HOM05D006929 ORTHO05D008646 1.0e-167 594.7 819 41.4
A08p21630 Brassica napus HOM05D006929 ORTHO05D008646 2.9e-167 593.2 843 41.0
BraA08t34110Z Brassica rapa HOM05D006929 ORTHO05D008646 2.9e-167 593.2 843 41.0
BcaB03g12433 Brassica carinata HOM05D006929 ORTHO05D008646 8.5e-167 591.7 844 41.4
Glyma.16G122300 Glycine max HOM05D006929 ORTHO05D008646 8.5e-167 591.7 835 41.4
Os03g0137400 Oryza sativa ssp. japonica HOM05D006929 ORTHO05D008646 2.1e-165 587.0 819 42.0
AUR62026416 Chenopodium quinoa HOM05D006929 ORTHO05D008646 1.1e-163 581.3 841 41.9
Manes.02G109700 Manihot esculenta HOM05D006929 ORTHO05D008646 2.6e-163 580.1 778 42.5
HPP92_028512 Vanilla planifolia HOM05D006929 ORTHO05D008646 4.8e-162 575.9 793 42.0
Sp7g33650 Schrenkiella parvula HOM05D006929 ORTHO05D008646 1.6e-157 560.8 836 40.3
Carub.0007s0436 Capsella rubella HOM05D006929 ORTHO05D008646 6.3e-154 548.9 784 41.2
CARHR244260 Cardamine hirsuta HOM05D006929 ORTHO05D008646 9.1e-153 545.0 784 41.2
Actinidia28729 Actinidia chinensis HOM05D006929 ORTHO05D008646 1.0e-151 541.6 773 41.7
Eucgr.I02311 Eucalyptus grandis HOM05D006929 ORTHO05D008646 2.3e-148 530.4 835 39.5
TPR.G19477 Trifolium pratense HOM05D006929 ORTHO05D008646 2.1e-141 507.3 743 41.0
Nn6g31928 Nelumbo nucifera HOM05D006929 ORTHO05D008646 5.0e-135 486.1 829 37.5
Lj2P484T36 Lonicera japonica HOM05D006929 ORTHO05D008646 1.6e-125 454.5 651 41.8
unitig_90.g27492 Utricularia gibba HOM05D006929 ORTHO05D008646 4.6e-120 436.4 606 40.9
FAN19G0159 Fragaria x ananassa HOM05D006929 ORTHO05D008646 5.1e-111 406.4 541 43.3
SHI31694 Sapria himalayana HOM05D006929 ORTHO05D008646 4.3e-110 403.3 602 38.7
Nitab4.5_0002105g0010 Nicotiana tabacum HOM05D006929 ORTHO05D008646 2.5e-94 350.9 782 32.7
CBR_g6408 Chara braunii HOM05D006929 ORTHO05D008646 1.1e-86 325.5 1157 26.4
HPP92_015017 Vanilla planifolia HOM05D006929 ORTHO05D008646 4.2e-81 307.0 410 43.2
HPP92_015018 Vanilla planifolia HOM05D006929 ORTHO05D008646 3.3e-70 270.8 383 39.9
FAN19G3132 Fragaria x ananassa HOM05D006929 ORTHO05D008646 4.2e-57 227.3 252 46.0
MCO05G457 Micromonas commoda HOM05D006929 ORTHO05D008646 8.5e-26 123.2 895 21.2
Atru.chr3.891 Acer truncatum HOM05D006929 ORTHO05D008646 1.1e-25 122.9 122 49.2
Atru.chr3.890 Acer truncatum HOM05D006929 ORTHO05D008646 2.0e-22 112.1 148 44.6
SMO121G0004 Selaginella moellendorffii HOM05D009803 ORTHO05D377500 9.8e-22 109.8 109 53.2
SMO146G0098 Selaginella moellendorffii HOM05D009803 ORTHO05D378840 2.4e-20 105.1 134 44.8
SMO111G0108 Selaginella moellendorffii HOM05D009803 ORTHO05D376169 1.6e-19 102.4 96 55.2
HanXRQChr14g0441731 Helianthus annuus HOM05D006929 ORTHO05D008646 4.5e-19 100.9 90 52.2
SMO150G0001 Selaginella moellendorffii HOM05D009803 ORTHO05D376120 1.7e-18 99.0 96 53.1
SMO121G0007 Selaginella moellendorffii HOM05D009803 ORTHO05D379204 1.9e-17 95.5 90 55.6
QL08p014302 Quercus lobata HOM05D006929 ORTHO05D008646 4.2e-17 94.4 93 46.2
SMO111G0126 Selaginella moellendorffii HOM05D009803 ORTHO05D378205 5.5e-17 94.0 89 55.1
Actinidia35671 Actinidia chinensis HOM05D006929 ORTHO05D008646 5.7e-14 84.0 104 42.3
SMO140G0007 Selaginella moellendorffii HOM05D009803 ORTHO05D379287 7.5e-14 83.6 168 35.7
CAN.G168.36 Capsicum annuum HOM05D006929 ORTHO05D008646 2.7e-11 75.1 74 48.6
Aqoxy7G01407 Aquilegia oxysepala HOM05D000321 ORTHO05D000204 7.8e-11 73.6 451 22.6
VMungo1309G0553 Vigna mungo HOM05D000375 ORTHO05D000240 1.0e-10 73.2 86 39.5
SMO140G0056 Selaginella moellendorffii HOM05D009803 ORTHO05D377204 1.3e-10 72.8 64 56.2
SMO140G0079 Selaginella moellendorffii HOM05D009803 ORTHO05D375312 8.6e-10 70.1 85 43.5
SMO140G0062 Selaginella moellendorffii HOM05D009803 ORTHO05D379131 7.3e-09 67.0 73 47.9
Psat1g092440 Pisum sativum HOM05D000411 ORTHO05D000310 1.2e-08 66.2 69 52.2
EL10Ac2g02932 Beta vulgaris HOM05D000321 ORTHO05D000204 2.1e-08 65.5 455 20.9
SMO140G0064 Selaginella moellendorffii HOM05D009803 ORTHO05D375888 2.1e-08 65.5 73 46.6
Atru.chr13.886 Acer truncatum HOM05D000321 ORTHO05D000204 2.8e-08 65.1 134 30.6
MD05G1278500 Malus domestica HOM05D000321 ORTHO05D000204 3.6e-08 64.7 656 21.6
Medtr1g017170 Medicago truncatula HOM05D000321 ORTHO05D000204 3.6e-08 64.7 159 27.0
Gohir.A05G212800 Gossypium hirsutum HOM05D000321 ORTHO05D000204 1.0e-07 63.2 179 24.6
SMO140G0063 Selaginella moellendorffii HOM05D009803 ORTHO05D375276 1.0e-07 63.2 73 45.2
Ca_06991_v3 Cicer arietinum L. HOM05D000321 ORTHO05D000204 1.4e-07 62.8 136 30.1
Lj4A750T32 Lonicera japonica HOM05D000321 ORTHO05D000204 3.1e-07 61.6 146 25.3
Potri.002G113800 Populus trichocarpa HOM05D000321 ORTHO05D000204 4.0e-07 61.2 184 24.5
Duzib116G0656 Durio zibethinus HOM05D000321 ORTHO05D000204 5.2e-07 60.8 193 21.8
MD15G1063600 Malus domestica HOM05D000321 ORTHO05D000204 5.2e-07 60.8 132 28.0
Phvul.009G074900 Phaseolus vulgaris HOM05D000321 ORTHO05D000204 5.2e-07 60.8 138 26.8
Gohir.D05G216100 Gossypium hirsutum HOM05D000321 ORTHO05D000204 6.8e-07 60.5 179 24.0
Gorai.009G222800 Gossypium raimondii HOM05D000321 ORTHO05D000204 6.8e-07 60.5 179 24.0
Hund05265 Selenicereus undatus HOM05D000321 ORTHO05D000204 6.8e-07 60.5 179 22.9
TPR.G13040 Trifolium pratense HOM05D000321 ORTHO05D000204 6.8e-07 60.5 132 27.3
SMO140G0095 Selaginella moellendorffii HOM05D009803 ORTHO05D378140 8.9e-07 60.1 117 34.2
COL.COLO4_28430 Corchorus olitorius HOM05D000321 ORTHO05D000204 1.2e-06 59.7 186 22.0
Thecc.08G082800 Theobroma cacao HOM05D000321 ORTHO05D000204 1.5e-06 59.3 133 24.1
Lalb_Chr14g0367981 Lupinus albus HOM05D000321 ORTHO05D000204 2.0e-06 58.9 136 28.7
Glyma.17G232235 Glycine max HOM05D000321 ORTHO05D000204 2.6e-06 58.5 132 26.5
Lj1g0018334 Lotus japonicus HOM05D000321 ORTHO05D000204 3.4e-06 58.2 172 23.8
Manes.05G184400 Manihot esculenta HOM05D000321 ORTHO05D000204 3.4e-06 58.2 132 25.8
Sp2g05100 Schrenkiella parvula HOM05D000321 ORTHO05D000204 3.4e-06 58.2 180 23.3
arahy.Tifrunner.gnm1.ann1.62ETWY Arachis hypogaea HOM05D000321 ORTHO05D000204 4.4e-06 57.8 132 26.5
AUR62039255 Chenopodium quinoa HOM05D000321 ORTHO05D000204 4.4e-06 57.8 158 25.3
Hund30423 Selenicereus undatus HOM05D000321 ORTHO05D000204 4.4e-06 57.8 681 19.8
arahy.Tifrunner.gnm1.ann1.Q7JHMP Arachis hypogaea HOM05D000321 ORTHO05D000204 5.8e-06 57.4 130 27.7
Carub.0002s0601 Capsella rubella HOM05D000321 ORTHO05D000204 5.8e-06 57.4 131 25.2
TWI36G0755 Tripterygium wilfordii HOM05D000321 ORTHO05D000204 5.8e-06 57.4 131 24.4
Cfa013723 Carpinus fangiana HOM05D000418 ORTHO05D000204 7.5e-06 57.0 133 26.3
Phvul.001G031900 Phaseolus vulgaris HOM05D000321 ORTHO05D000204 7.5e-06 57.0 133 26.3
VMungo0647G0363 Vigna mungo HOM05D000321 ORTHO05D000204 7.5e-06 57.0 134 26.9
CiPaw.08G053300 Carya illinoinensis HOM05D000321 ORTHO05D000204 9.8e-06 56.6 133 24.8
Haze_22367 Corylus avellana HOM05D000321 ORTHO05D000204 9.8e-06 56.6 133 26.3
Lsat_1_v5_gn_6_108361 Lactuca sativa HOM05D000321 ORTHO05D000204 9.8e-06 56.6 177 28.8
SMO338G0010 Selaginella moellendorffii HOM05D009803 ORTHO05D374477 9.8e-06 56.6 74 45.9


User provided reference genes

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