Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO310G0006 Selaginella moellendorffii HOM05D006493 ORTHO05D009864 2.7e-264 914.8 484 100.0
PGR069G0009 Punica granatum HOM05D006493 ORTHO05D009864 4.9e-32 143.3 312 37.5
Nn1g10151 Nelumbo nucifera HOM05D006493 ORTHO05D009864 1.5e-28 131.7 254 40.6
HanXRQMTg0579071 Helianthus annuus HOM05D006493 ORTHO05D009864 5.5e-23 113.2 255 38.8
SabraMtG0004500 Salix brachista HOM05D006493 ORTHO05D009864 5.5e-23 113.2 204 43.1
CDE02G4414 Ceratophyllum demersum HOM05D006493 ORTHO05D009864 7.2e-23 112.8 253 37.9
CsaV3_UNG208130 Cucumis sativus L. HOM05D006493 ORTHO05D009864 7.2e-23 112.8 233 39.5
SalBow1G2520 Salvia bowleyana HOM05D006493 ORTHO05D009864 7.2e-23 112.8 204 42.2
Gorai.001G164600 Gossypium raimondii HOM05D006493 ORTHO05D009864 2.1e-22 111.3 247 38.5
arahy.Tifrunner.gnm1.ann1.G2UG47 Arachis hypogaea HOM05D006493 ORTHO05D009864 4.6e-22 110.2 234 38.9
arahy.Tifrunner.gnm1.ann1.PL6HV0 Arachis hypogaea HOM05D006493 ORTHO05D009864 4.6e-22 110.2 234 38.9
Lsat_1_v5_gn_5_28201 Lactuca sativa HOM05D006493 ORTHO05D009864 4.6e-22 110.2 204 42.2
TPR.G39758 Trifolium pratense HOM05D006493 ORTHO05D009864 4.6e-22 110.2 202 42.1
Aqoxy1G02970 Aquilegia oxysepala HOM05D006493 ORTHO05D009864 6.1e-22 109.8 191 44.0
RhsimMtG0006700 Rhododendron simsii HOM05D006493 ORTHO05D009864 1.4e-21 108.6 201 42.3
RcHm_v2.0_MTg0498511 Rosa chinensis HOM05D006493 ORTHO05D009864 1.4e-21 108.6 204 41.7
Ah.10g028490 Amaranthus hybridus HOM05D006493 ORTHO05D009864 2.3e-21 107.8 212 41.5
arahy.Tifrunner.gnm1.ann1.REK9CK Arachis hypogaea HOM05D006493 ORTHO05D009864 2.3e-21 107.8 234 38.5
Potri.007G062522 Populus trichocarpa HOM05D006493 ORTHO05D009864 2.3e-21 107.8 191 43.5
Aa31csc239G90 Aethionema arabicum HOM05D006493 ORTHO05D009864 3.9e-21 107.1 191 43.5
AT2G07689 Arabidopsis thaliana HOM05D006493 ORTHO05D009864 3.9e-21 107.1 191 43.5
A04p09370 Brassica napus HOM05D006493 ORTHO05D009864 3.9e-21 107.1 191 43.5
BolSC28t60313H Brassica oleracea HOM05D006493 ORTHO05D009864 3.9e-21 107.1 191 43.5
BraSC159t45728Z Brassica rapa HOM05D006493 ORTHO05D009864 3.9e-21 107.1 191 43.5
BraSC48t46238Z Brassica rapa HOM05D006493 ORTHO05D009864 3.9e-21 107.1 191 43.5
CARHR283510 Cardamine hirsuta HOM05D006493 ORTHO05D009864 3.9e-21 107.1 191 43.5
CARHR288180 Cardamine hirsuta HOM05D006493 ORTHO05D009864 3.9e-21 107.1 191 43.5
Sp3g25780 Schrenkiella parvula HOM05D006493 ORTHO05D009864 3.9e-21 107.1 191 43.5
DCAR_028366 Daucus carota HOM05D006493 ORTHO05D009864 8.8e-21 105.9 191 42.9
Zm00001eb436160 Zea mays HOM05D006493 ORTHO05D009864 1.5e-20 105.1 140 51.4
Psat7g093520 Pisum sativum HOM05D006493 ORTHO05D009864 2.0e-20 104.8 189 42.9
SGA_v2.0_scaffold255G45360 Striga asiatica HOM05D006493 ORTHO05D009864 2.0e-20 104.8 140 52.1
Lsat_1_v5_gn_1_2660 Lactuca sativa HOM05D006493 ORTHO05D009864 2.5e-20 104.4 140 52.1
Lj2C1221T62 Lonicera japonica HOM05D006493 ORTHO05D009864 2.5e-20 104.4 189 43.4
Lj2C1230T74 Lonicera japonica HOM05D006493 ORTHO05D009864 2.5e-20 104.4 189 43.4
Solyc00g125990.1 Solanum lycopersicum HOM05D006493 ORTHO05D009864 4.3e-20 103.6 191 42.9
Solyc00g500314.1 Solanum lycopersicum HOM05D006493 ORTHO05D009864 4.3e-20 103.6 191 42.9
PGSC0003DMG400021388 Solanum tuberosum HOM05D006493 ORTHO05D009864 4.3e-20 103.6 191 42.9
AUR62042325 Chenopodium quinoa HOM05D006493 ORTHO05D009864 7.4e-20 102.8 138 52.2
AUR62042341 Chenopodium quinoa HOM05D006493 ORTHO05D009864 7.4e-20 102.8 138 52.2
LjContig00439g0012697 Lotus japonicus HOM05D006493 ORTHO05D009864 9.7e-20 102.4 189 42.3
LjContig00439g0026284 Lotus japonicus HOM05D006493 ORTHO05D009864 9.7e-20 102.4 189 42.3
CAN.G1159.4 Capsicum annuum HOM05D006493 ORTHO05D009864 1.3e-19 102.1 191 41.9
unitig_87.g27995 Utricularia gibba HOM05D006493 ORTHO05D009864 3.7e-19 100.5 140 51.4
Lsat_1_v5_gn_0_38180 Lactuca sativa HOM05D006493 ORTHO05D009864 6.3e-19 99.8 140 51.4
TWI79G1044 Tripterygium wilfordii HOM05D006493 ORTHO05D009864 6.3e-19 99.8 191 41.4
GSVIVG01007203001 Vitis vinifera HOM05D006493 ORTHO05D009864 8.2e-19 99.4 208 39.4
Peaxi162Scf00286g00018 Petunia axillaris HOM05D006493 ORTHO05D009864 1.8e-18 98.2 138 50.7
HanXRQChr09g0256301 Helianthus annuus HOM05D006493 ORTHO05D009864 4.1e-18 97.1 140 49.3
Nitab4.5_0000055g0330 Nicotiana tabacum HOM05D006493 ORTHO05D009864 9.1e-18 95.9 140 49.3
HanXRQChr07g0188931 Helianthus annuus HOM05D006493 ORTHO05D009864 5.0e-16 90.1 209 38.3
HanXRQChr07g0188941 Helianthus annuus HOM05D006493 ORTHO05D009864 5.0e-16 90.1 209 38.3
Nitab4.5_0000085g0150 Nicotiana tabacum HOM05D006493 ORTHO05D009864 6.5e-16 89.7 140 47.9
SHI34943 Sapria himalayana HOM05D006493 ORTHO05D009864 2.1e-14 84.7 189 38.6
CDE02G4378 Ceratophyllum demersum HOM05D006493 ORTHO05D009864 2.3e-13 81.3 204 37.7
Nitab4.5_0000172g0060 Nicotiana tabacum HOM05D006493 ORTHO05D009864 1.3e-11 75.5 190 35.8
Thhalv10015951m.g Eutrema salsugineum HOM05D006493 ORTHO05D009864 1.7e-11 75.1 180 36.1
arahy.Tifrunner.gnm1.ann1.FPLM06 Arachis hypogaea HOM05D006493 ORTHO05D009864 2.2e-11 74.7 234 32.5
Sed0007165 Sechium edule HOM05D006493 ORTHO05D009864 8.2e-11 72.8 140 42.1
Nitab4.5_0000028g0250 Nicotiana tabacum HOM05D006493 ORTHO05D009864 1.1e-10 72.4 148 39.9
Nitab4.5_0000172g1810 Nicotiana tabacum HOM05D006493 ORTHO05D009864 9.1e-10 69.3 183 37.2
Nitab4.5_0001506g0070 Nicotiana tabacum HOM05D006493 ORTHO05D009864 3.5e-09 67.4 85 50.6
arahy.Tifrunner.gnm1.ann1.ZF89K8 Arachis hypogaea HOM05D006493 ORTHO05D009864 5.9e-09 66.6 266 28.9
Hma1.2p1_0110F.1_g052985 Hydrangea macrophylla HOM05D006493 ORTHO05D009864 5.9e-09 66.6 140 40.0
ATR0661G311 Amborella trichopoda HOM05D006493 ORTHO05D009864 1.3e-08 65.5 148 37.8
Nitab4.5_0008300g0030 Nicotiana tabacum HOM05D006493 ORTHO05D009864 3.8e-08 63.9 166 34.9
Zm00001eb372930 Zea mays HOM05D006493 ORTHO05D009864 1.5e-07 62.0 62 58.1
Zm00001eb384470 Zea mays HOM05D006493 ORTHO05D009864 1.5e-07 62.0 62 58.1
Zm00001eb435510 Zea mays HOM05D006493 ORTHO05D009864 1.5e-07 62.0 62 58.1
Zm00001eb436120 Zea mays HOM05D006493 ORTHO05D009864 1.5e-07 62.0 62 58.1
Haze_26858 Corylus avellana HOM05D000729 ORTHO05D001063 7.2e-07 59.7 397 25.9
Nitab4.5_0000593g0190 Nicotiana tabacum HOM05D006493 ORTHO05D009864 9.4e-07 59.3 108 43.5
Lsat_1_v5_gn_3_72900 Lactuca sativa HOM05D006493 ORTHO05D009864 2.1e-06 58.2 132 39.4
SEGI_14764 Sequoiadendron giganteum HOM05D008466 ORTHO05D010817 2.7e-06 57.8 126 40.5
Hund29781 Selenicereus undatus HOM05D006493 ORTHO05D009864 4.7e-06 57.0 81 49.4


User provided reference genes

Program Settings