Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO308G0041 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 3.3e-245 851.3 440 100.0
SMO271G0182 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 2.3e-214 748.8 440 90.0
Mapoly0014s0012 Marchantia polymorpha HOM05D007058 ORTHO05D009036 1.6e-109 400.6 417 50.6
Mapoly0014s0018 Marchantia polymorpha HOM05D007058 ORTHO05D009036 1.8e-105 387.1 366 53.3
ATR0681G321 Amborella trichopoda HOM05D007058 ORTHO05D009036 9.5e-99 364.8 417 46.5
Pp3c1_26880 Physcomitrium patens HOM05D007058 ORTHO05D009036 4.0e-89 332.8 416 45.0
TAR629G3445 Trochodendron aralioides HOM05D007058 ORTHO05D009036 8.9e-89 331.6 411 45.3
HPP92_023400 Vanilla planifolia HOM05D007058 ORTHO05D009036 5.8e-88 328.9 413 43.6
TAR535G0005 Trochodendron aralioides HOM05D007058 ORTHO05D009036 9.9e-88 328.2 411 45.0
Dinv12229 Davidia involucrata HOM05D007058 ORTHO05D009036 6.4e-87 325.5 412 45.1
Hma1.2p1_1614F.1_g293670 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 9.2e-86 321.6 410 45.1
Hma1.2p1_2594F.1_g325085 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 9.2e-86 321.6 410 45.1
AagrBONN_evm.TU.Sc2ySwM_228.2408 Anthoceros agrestis HOM05D007058 ORTHO05D009036 7.8e-85 318.5 302 54.6
Nn3g17960 Nelumbo nucifera HOM05D007058 ORTHO05D009036 1.0e-84 318.2 407 42.3
GSVIVG01008345001 Vitis vinifera HOM05D007058 ORTHO05D009036 1.0e-84 318.2 410 44.4
Sc12g0007400 Simmondsia chinensis HOM05D007058 ORTHO05D009036 2.3e-84 317.0 426 43.7
MBI16_g25105_MAGBIO Magnolia biondii HOM05D007058 ORTHO05D009036 5.1e-84 315.8 409 44.0
PGR044G0638 Punica granatum HOM05D007058 ORTHO05D009036 1.9e-83 313.9 413 43.6
Duzib205G0828 Durio zibethinus HOM05D007058 ORTHO05D009036 3.3e-83 313.2 433 42.7
Gohir.A07G059500 Gossypium hirsutum HOM05D007058 ORTHO05D009036 5.6e-83 312.4 426 43.7
Thecc.03G043100 Theobroma cacao HOM05D007058 ORTHO05D009036 9.6e-83 311.6 434 42.4
Aqoxy3G04055 Aquilegia oxysepala HOM05D007058 ORTHO05D009036 1.2e-82 311.2 407 42.8
QL10p026796 Quercus lobata HOM05D007058 ORTHO05D009036 3.6e-82 309.7 412 43.0
Peaxi162Scf00683g00337 Petunia axillaris HOM05D007058 ORTHO05D009036 4.7e-82 309.3 441 43.3
PSO782G5502 Papaver somniferum HOM05D007058 ORTHO05D009036 1.8e-81 307.4 413 42.1
Lj9A424T33 Lonicera japonica HOM05D007058 ORTHO05D009036 6.8e-81 305.4 410 44.1
TAR371G0970 Trochodendron aralioides HOM05D007058 ORTHO05D009036 8.9e-81 305.1 404 41.3
Ciclev10020201m.g Citrus clementina HOM05D007058 ORTHO05D009036 2.0e-80 303.9 414 43.7
PSO063G1254 Papaver somniferum HOM05D007058 ORTHO05D009036 2.0e-80 303.9 413 42.4
TWI60G0394 Tripterygium wilfordii HOM05D007058 ORTHO05D009036 2.2e-79 300.4 423 42.3
arahy.Tifrunner.gnm1.ann1.8NC01M Arachis hypogaea HOM05D007058 ORTHO05D009036 2.9e-79 300.1 412 42.0
Actinidia02670 Actinidia chinensis HOM05D007058 ORTHO05D009036 8.4e-79 298.5 410 42.7
Manes.01G015400 Manihot esculenta HOM05D007058 ORTHO05D009036 1.4e-78 297.7 431 40.8
CANSAT80G0903 Cannabis sativa HOM05D007058 ORTHO05D009036 2.4e-78 297.0 413 41.6
Atru.chr9.916 Acer truncatum HOM05D007058 ORTHO05D009036 3.2e-78 296.6 418 42.1
arahy.Tifrunner.gnm1.ann1.LC4GJT Arachis hypogaea HOM05D007058 ORTHO05D009036 4.2e-78 296.2 435 40.5
Solyc03g118860.3 Solanum lycopersicum HOM05D007058 ORTHO05D009036 7.1e-78 295.4 411 43.6
Prupe.5G225300 Prunus persica HOM05D007058 ORTHO05D009036 9.3e-78 295.0 420 41.9
Sopen03g037810 Solanum pennellii HOM05D007058 ORTHO05D009036 9.3e-78 295.0 411 43.8
RcHm_v2.0_Chr7g0179381 Rosa chinensis HOM05D007058 ORTHO05D009036 3.5e-77 293.1 413 41.9
FAN08G1503 Fragaria x ananassa HOM05D007058 ORTHO05D009036 4.6e-77 292.7 410 42.4
PGSC0003DMG400005667 Solanum tuberosum HOM05D007058 ORTHO05D009036 4.6e-77 292.7 435 42.5
Cc04_g06820 Coffea canephora HOM05D007058 ORTHO05D009036 6.0e-77 292.4 432 41.0
FAN04G2101 Fragaria x ananassa HOM05D007058 ORTHO05D009036 6.0e-77 292.4 410 42.2
Cpa.g.sc3.458 Carica papaya HOM05D007058 ORTHO05D009036 1.0e-76 291.6 409 42.1
COL.COLO4_38517 Corchorus olitorius HOM05D007058 ORTHO05D009036 1.0e-76 291.6 417 41.5
Nitab4.5_0001456g0070 Nicotiana tabacum HOM05D007058 ORTHO05D009036 1.3e-76 291.2 432 42.6
Nitab4.5_0006894g0050 Nicotiana tabacum HOM05D007058 ORTHO05D009036 1.7e-76 290.8 428 42.5
FAN13G1457 Fragaria x ananassa HOM05D007058 ORTHO05D009036 3.0e-76 290.0 418 41.4
FAN18G2897 Fragaria x ananassa HOM05D007058 ORTHO05D009036 3.9e-76 289.7 410 41.7
HPP92_027335 Vanilla planifolia HOM05D007058 ORTHO05D009036 3.9e-76 289.7 410 41.7
Sabra12G0037400 Salix brachista HOM05D007058 ORTHO05D009036 8.7e-76 288.5 411 40.4
Potri.012G053600 Populus trichocarpa HOM05D007058 ORTHO05D009036 1.1e-75 288.1 411 41.1
EL10Ac5g11484 Beta vulgaris HOM05D007058 ORTHO05D009036 1.9e-75 287.3 411 41.8
HPP92_017197 Vanilla planifolia HOM05D007058 ORTHO05D009036 1.9e-75 287.3 410 41.5
CAN.G1129.46 Capsicum annuum HOM05D007058 ORTHO05D009036 3.3e-75 286.6 411 42.3
MD06G1220900 Malus domestica HOM05D007058 ORTHO05D009036 1.3e-74 284.6 435 39.5
Sed0017039 Sechium edule HOM05D007058 ORTHO05D009036 1.3e-74 284.6 421 40.1
AUR62033787 Chenopodium quinoa HOM05D007058 ORTHO05D009036 2.1e-74 283.9 428 39.5
ClCG04G010870 Citrullus lanatus HOM05D007058 ORTHO05D009036 4.8e-74 282.7 415 41.4
Eucgr.K02237 Eucalyptus grandis HOM05D007058 ORTHO05D009036 2.4e-73 280.4 385 43.1
CsaV3_1G006960 Cucumis sativus L. HOM05D007058 ORTHO05D009036 6.9e-73 278.9 413 40.2
Gorai.001G067900 Gossypium raimondii HOM05D007058 ORTHO05D009036 1.5e-72 277.7 306 49.7
MELO3C002112.2 Cucumis melo HOM05D007058 ORTHO05D009036 2.6e-72 276.9 413 40.2
MD14G1230300 Malus domestica HOM05D007058 ORTHO05D009036 8.4e-71 271.9 421 39.4
Migut.I00419 Erythranthe guttata HOM05D007058 ORTHO05D009036 2.4e-70 270.4 416 39.7
Haze_18744 Corylus avellana HOM05D007058 ORTHO05D009036 9.3e-70 268.5 395 42.3
AUR62029919 Chenopodium quinoa HOM05D007058 ORTHO05D009036 1.7e-68 264.2 309 46.3
Lj4g0007182 Lotus japonicus HOM05D007058 ORTHO05D009036 1.7e-68 264.2 411 39.7
THA.LOC104813907 Tarenaya hassleriana HOM05D007058 ORTHO05D009036 1.7e-68 264.2 412 40.5
Hund02350 Selenicereus undatus HOM05D007058 ORTHO05D009036 5.1e-68 262.7 428 37.1
Aa31LG4G4070 Aethionema arabicum HOM05D007058 ORTHO05D009036 4.0e-65 253.1 430 36.0
VMungo0251G0619 Vigna mungo HOM05D007058 ORTHO05D009036 2.2e-63 247.3 428 37.4
MCO02G081 Micromonas commoda HOM05D007058 ORTHO05D009036 2.9e-63 246.9 419 38.9
Thhalv10018574m.g Eutrema salsugineum HOM05D007058 ORTHO05D009036 3.8e-63 246.5 419 35.3
C06p47890 Brassica napus HOM05D007058 ORTHO05D009036 1.6e-61 241.1 429 35.4
BolC6t39824H Brassica oleracea HOM05D007058 ORTHO05D009036 1.6e-61 241.1 429 35.4
A07p39600 Brassica napus HOM05D007058 ORTHO05D009036 2.7e-61 240.4 417 36.2
CARHR066810 Cardamine hirsuta HOM05D007058 ORTHO05D009036 6.0e-61 239.2 433 35.1
AL2G33550 Arabidopsis lyrata HOM05D007058 ORTHO05D009036 7.9e-61 238.8 427 35.1
BraA07t31509Z Brassica rapa HOM05D007058 ORTHO05D009036 1.0e-60 238.4 417 35.7
Oeu017513.1 Olea europaea HOM05D007058 ORTHO05D009036 3.9e-60 236.5 383 39.2
Sp5g28930 Schrenkiella parvula HOM05D007058 ORTHO05D009036 5.1e-60 236.1 420 34.8
BcaB03g15080 Brassica carinata HOM05D007058 ORTHO05D009036 8.7e-60 235.3 412 35.9
Carub.0002s2049 Capsella rubella HOM05D007058 ORTHO05D009036 8.7e-60 235.3 425 34.8
Phvul.002G325300 Phaseolus vulgaris HOM05D007058 ORTHO05D009036 7.4e-59 232.3 356 39.6
Glyma.05G242000 Glycine max HOM05D007058 ORTHO05D009036 2.8e-58 230.3 321 41.7
CBR_g74658 Chara braunii HOM05D007058 ORTHO05D009036 3.7e-58 229.9 629 28.8
AT1G73740 Arabidopsis thaliana HOM05D007058 ORTHO05D009036 6.9e-57 225.7 425 33.9
PRCOL_00000956 Prasinoderma coloniale HOM05D007058 ORTHO05D009036 3.4e-56 223.4 419 37.2
FvH4_5g16720 Fragaria vesca HOM05D007058 ORTHO05D009036 7.6e-56 222.2 255 46.3
Rhsim08G0129700 Rhododendron simsii HOM05D007058 ORTHO05D009036 6.5e-55 219.2 270 45.9
Gohir.D07G064300 Gossypium hirsutum HOM05D007058 ORTHO05D009036 5.5e-46 189.5 195 49.2
Os01g0516700 Oryza sativa ssp. japonica HOM05D007058 ORTHO05D009036 7.4e-43 179.1 312 36.5
Glyma.08G049500 Glycine max HOM05D007058 ORTHO05D009036 8.5e-31 139.0 185 41.1
Zm00001eb132130 Zea mays HOM05D007058 ORTHO05D009036 3.3e-27 127.1 243 34.2
Cre12.g527950 Chlamydomonas reinhardtii HOM05D007058 ORTHO05D009036 1.8e-25 121.3 368 29.1
CAN.G1074.8 Capsicum annuum HOM05D007058 ORTHO05D009036 8.2e-18 95.9 135 40.7
arahy.Tifrunner.gnm1.ann1.4SU3WD Arachis hypogaea HOM05D007058 ORTHO05D009036 1.0e-15 89.0 128 39.8
Glyma.08G049450 Glycine max HOM05D007058 ORTHO05D009036 3.6e-13 80.5 137 38.7
SalBow5G0499 Salvia bowleyana HOM05D007058 ORTHO05D010040 1.2e-11 75.5 115 40.0
SEGI_28231 Sequoiadendron giganteum HOM05D007058 ORTHO05D009036 1.7e-10 71.6 100 46.0
BcaC08g46795 Brassica carinata HOM05D007058 ORTHO05D009036 3.7e-10 70.5 97 42.3
Rhsim08G0129800 Rhododendron simsii HOM05D007058 ORTHO05D021411 4.2e-06 57.0 47 68.1


User provided reference genes

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