Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO307G0050 Selaginella moellendorffii HOM05D037974 ORTHO05D008247 6.9e-162 573.9 293 100.0
SMO353G0253 Selaginella moellendorffii HOM05D037974 ORTHO05D376093 2.7e-33 146.7 234 38.0
SMO364G0758 Selaginella moellendorffii HOM05D037974 ORTHO05D379049 7.7e-20 102.1 183 34.4
Pp3c7_1410 Physcomitrium patens HOM05D006617 ORTHO05D008247 5.1e-16 89.4 227 31.7
SEGI_22684 Sequoiadendron giganteum HOM05D006617 ORTHO05D008247 2.8e-14 83.6 219 30.6
Ciclev10016122m.g Citrus clementina HOM05D006617 ORTHO05D008247 3.4e-12 76.6 181 29.8
SMO329G0076 Selaginella moellendorffii HOM05D006617 ORTHO05D008247 3.4e-12 76.6 234 26.9
AagrBONN_evm.TU.Sc2ySwM_228.4793 Anthoceros agrestis HOM05D006617 ORTHO05D008247 7.7e-12 75.5 219 26.5
Pp3c20_8200 Physcomitrium patens HOM05D006617 ORTHO05D008247 1.7e-11 74.3 224 25.9
Nn6g33542 Nelumbo nucifera HOM05D006617 ORTHO05D008247 1.1e-10 71.6 215 26.0
Manes.12G073000 Manihot esculenta HOM05D006617 ORTHO05D008247 1.4e-10 71.2 211 29.4
CiPaw.11G138400 Carya illinoinensis HOM05D006617 ORTHO05D008247 4.2e-10 69.7 233 26.6
Migut.A00797 Erythranthe guttata HOM05D006617 ORTHO05D008247 5.5e-10 69.3 180 25.0
BcaB01g03976 Brassica carinata HOM05D006617 ORTHO05D008247 7.2e-10 68.9 218 27.5
Cpa.g.sc39.21 Carica papaya HOM05D006617 ORTHO05D008247 7.2e-10 68.9 181 28.2
Mapoly0086s0010 Marchantia polymorpha HOM05D006617 ORTHO05D008247 7.2e-10 68.9 204 30.9
A03p18190 Brassica napus HOM05D006617 ORTHO05D008247 1.6e-09 67.8 218 27.5
BraA03t11079Z Brassica rapa HOM05D006617 ORTHO05D008247 1.6e-09 67.8 218 27.5
CAN.G26.17 Capsicum annuum HOM05D006617 ORTHO05D008247 1.6e-09 67.8 219 25.1
Prupe.5G095100 Prunus persica HOM05D006617 ORTHO05D008247 3.6e-09 66.6 211 26.5
THA.LOC104800995 Tarenaya hassleriana HOM05D006617 ORTHO05D008247 4.7e-09 66.2 181 28.2
Atru.chr6.3216 Acer truncatum HOM05D006617 ORTHO05D008247 6.1e-09 65.9 219 26.0
ATR0680G238 Amborella trichopoda HOM05D006617 ORTHO05D008247 6.1e-09 65.9 202 26.7
PGSC0003DMG400004251 Solanum tuberosum HOM05D006617 ORTHO05D008247 6.1e-09 65.9 203 25.6
BcaC01g05904 Brassica carinata HOM05D006617 ORTHO05D008247 7.9e-09 65.5 218 27.1
C03p21220 Brassica napus HOM05D006617 ORTHO05D008247 7.9e-09 65.5 218 27.1
BolC3t14504H Brassica oleracea HOM05D006617 ORTHO05D008247 7.9e-09 65.5 218 27.1
SalBow6G1063 Salvia bowleyana HOM05D006617 ORTHO05D008247 7.9e-09 65.5 190 26.3
Sp4g14850 Schrenkiella parvula HOM05D006617 ORTHO05D008247 7.9e-09 65.5 218 28.4
Duzib251G0852 Durio zibethinus HOM05D006617 ORTHO05D008247 1.0e-08 65.1 208 26.4
QL12p017915 Quercus lobata HOM05D006617 ORTHO05D008247 1.4e-08 64.7 181 26.5
TWI36G1290 Tripterygium wilfordii HOM05D006617 ORTHO05D008247 2.3e-08 63.9 181 27.6
CSS0023405 Camellia sinensis var. sinensis HOM05D006617 ORTHO05D008247 3.0e-08 63.5 182 26.4
Solyc12g056350.2 Solanum lycopersicum HOM05D006617 ORTHO05D008247 3.0e-08 63.5 180 23.9
Sopen12g028920 Solanum pennellii HOM05D006617 ORTHO05D008247 5.1e-08 62.8 182 24.7
Dinv38979 Davidia involucrata HOM05D006617 ORTHO05D008247 6.7e-08 62.4 173 26.6
Mapoly0086s0005 Marchantia polymorpha HOM05D006617 ORTHO05D008247 6.7e-08 62.4 212 24.5
Thhalv10017053m.g Eutrema salsugineum HOM05D006617 ORTHO05D008247 8.8e-08 62.0 218 25.7
CsaV3_4G006040 Cucumis sativus L. HOM05D006617 ORTHO05D008247 1.1e-07 61.6 206 26.2
TAR375G0379 Trochodendron aralioides HOM05D006617 ORTHO05D008247 1.1e-07 61.6 227 26.0
Gohir.D12G177000 Gossypium hirsutum HOM05D006617 ORTHO05D008247 1.5e-07 61.2 209 27.3
Gorai.008G189400 Gossypium raimondii HOM05D006617 ORTHO05D008247 1.5e-07 61.2 209 27.3
Phvul.002G287200 Phaseolus vulgaris HOM05D006617 ORTHO05D008247 1.5e-07 61.2 219 26.0
Gohir.A12G174300 Gossypium hirsutum HOM05D006617 ORTHO05D008247 2.0e-07 60.8 209 27.3
MELO3C016345.2 Cucumis melo HOM05D006617 ORTHO05D008247 2.6e-07 60.5 181 26.0
Lalb_Chr05g0224971 Lupinus albus HOM05D006617 ORTHO05D008247 3.3e-07 60.1 181 27.1
AL4G27880 Arabidopsis lyrata HOM05D006617 ORTHO05D008247 5.7e-07 59.3 180 25.0
Carub.0004s1384 Capsella rubella HOM05D006617 ORTHO05D008247 7.4e-07 58.9 180 25.6
FvH4_5g01880 Fragaria vesca HOM05D006617 ORTHO05D008247 9.7e-07 58.5 208 27.4
FAN18G0570 Fragaria x ananassa HOM05D006617 ORTHO05D008247 1.3e-06 58.2 208 27.4
Actinidia14540 Actinidia chinensis HOM05D006617 ORTHO05D008247 1.7e-06 57.8 229 21.8
COL.COLO4_11251 Corchorus olitorius HOM05D006617 ORTHO05D008247 2.2e-06 57.4 207 24.6
Peaxi162Scf01294g00327 Petunia axillaris HOM05D006617 ORTHO05D008247 2.8e-06 57.0 219 24.2
DCAR_008412 Daucus carota HOM05D006617 ORTHO05D008247 6.3e-06 55.8 181 24.9
PGR031G1807 Punica granatum HOM05D006617 ORTHO05D008247 8.2e-06 55.5 171 26.3


User provided reference genes

Program Settings