Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO302G0032 Selaginella moellendorffii HOM05D000062 ORTHO05D374363 1.6e-21 105.1 53 100.0
SMO172G0025 Selaginella moellendorffii HOM05D000062 ORTHO05D008040 3.2e-17 90.9 53 86.8
SalBow2G3043 Salvia bowleyana HOM05D000062 ORTHO05D008040 1.7e-10 68.6 53 64.2
Dinv44528 Davidia involucrata HOM05D000062 ORTHO05D008040 2.9e-10 67.8 53 64.2
MBI04_g20821_MAGBIO Magnolia biondii HOM05D000062 ORTHO05D008040 2.9e-10 67.8 53 64.2
Rhsim02G0023300 Rhododendron simsii HOM05D000062 ORTHO05D008040 2.9e-10 67.8 53 62.3
Aa31LG5G4900 Aethionema arabicum HOM05D000062 ORTHO05D008040 3.8e-10 67.4 53 66.0
PSO832G1811 Papaver somniferum HOM05D000062 ORTHO05D008040 3.8e-10 67.4 53 62.3
Migut.G00332 Erythranthe guttata HOM05D000062 ORTHO05D008040 4.9e-10 67.0 53 64.2
HPP92_020372 Vanilla planifolia HOM05D000062 ORTHO05D008040 4.9e-10 67.0 53 62.3
EL10Ac3g06426 Beta vulgaris HOM05D000062 ORTHO05D008040 6.4e-10 66.6 53 62.3
Nitab4.5_0000043g0270 Nicotiana tabacum HOM05D000062 ORTHO05D008040 8.4e-10 66.2 53 62.3
Solyc09g075950.1 Solanum lycopersicum HOM05D000062 ORTHO05D008040 8.4e-10 66.2 53 64.2
Sopen09g030780 Solanum pennellii HOM05D000062 ORTHO05D008040 8.4e-10 66.2 53 64.2
PGSC0003DMG400030089 Solanum tuberosum HOM05D000062 ORTHO05D008040 8.4e-10 66.2 53 64.2
AagrBONN_evm.TU.Sc2ySwM_344.4607 Anthoceros agrestis HOM05D000062 ORTHO05D008040 1.1e-09 65.9 53 64.2
AagrBONN_evm.TU.Sc2ySwM_344.4608 Anthoceros agrestis HOM05D000062 ORTHO05D008040 1.1e-09 65.9 53 64.2
BcaB02g10452 Brassica carinata HOM05D000062 ORTHO05D008040 1.1e-09 65.9 53 64.2
A05p13390 Brassica napus HOM05D000062 ORTHO05D008040 1.1e-09 65.9 53 64.2
C04p17510 Brassica napus HOM05D000062 ORTHO05D008040 1.1e-09 65.9 53 64.2
BolC4t23298H Brassica oleracea HOM05D000062 ORTHO05D008040 1.1e-09 65.9 53 64.2
CAN.G907.7 Capsicum annuum HOM05D000062 ORTHO05D008040 1.1e-09 65.9 53 62.3
Manes.15G028300 Manihot esculenta HOM05D000062 ORTHO05D008040 1.1e-09 65.9 53 64.2
Nn1g02279 Nelumbo nucifera HOM05D000062 ORTHO05D008040 1.1e-09 65.9 53 62.3
Nitab4.5_0000932g0020 Nicotiana tabacum HOM05D000062 ORTHO05D008040 1.1e-09 65.9 53 62.3
Sc19g0004230 Simmondsia chinensis HOM05D000062 ORTHO05D008040 1.1e-09 65.9 53 62.3
Atru.ctg752_3.92 Acer truncatum HOM05D000062 ORTHO05D008040 1.4e-09 65.5 53 60.4
Aqoxy5G00482 Aquilegia oxysepala HOM05D000062 ORTHO05D008040 1.4e-09 65.5 53 62.3
BraA05t20277Z Brassica rapa HOM05D000062 ORTHO05D008040 1.4e-09 65.5 53 64.2
CSS0005594 Camellia sinensis var. sinensis HOM05D000062 ORTHO05D008040 1.4e-09 65.5 53 62.3
CANSAT78G0393 Cannabis sativa HOM05D000062 ORTHO05D008040 1.4e-09 65.5 53 60.4
Carub.0004s1346 Capsella rubella HOM05D000062 ORTHO05D008040 1.4e-09 65.5 53 64.2
AUR62041322 Chenopodium quinoa HOM05D000062 ORTHO05D008040 1.4e-09 65.5 53 60.4
Cc03_g03680 Coffea canephora HOM05D000062 ORTHO05D008040 1.4e-09 65.5 53 62.3
Eucgr.H03518 Eucalyptus grandis HOM05D000062 ORTHO05D008040 1.4e-09 65.5 53 60.4
Thhalv10016453m.g Eutrema salsugineum HOM05D000062 ORTHO05D008040 1.4e-09 65.5 53 64.2
Glyma.01G238600 Glycine max HOM05D000062 ORTHO05D008040 1.4e-09 65.5 53 62.3
Lj3P737T46 Lonicera japonica HOM05D000062 ORTHO05D008040 1.4e-09 65.5 53 62.3
Oeu031237.1 Olea europaea HOM05D000062 ORTHO05D008040 1.4e-09 65.5 53 60.4
Sabra08G0115800 Salix brachista HOM05D000062 ORTHO05D008040 1.4e-09 65.5 53 60.4
Sp4g14520 Schrenkiella parvula HOM05D000062 ORTHO05D008040 1.4e-09 65.5 53 64.2
THA.LOC104800965 Tarenaya hassleriana HOM05D000062 ORTHO05D008040 1.4e-09 65.5 53 64.2
AL103U10020 Arabidopsis lyrata HOM05D000062 ORTHO05D008040 1.9e-09 65.1 53 64.2
AL4G27490 Arabidopsis lyrata HOM05D000062 ORTHO05D008040 1.9e-09 65.1 53 64.2
MSTRG.21850 Avicennia marina HOM05D000062 ORTHO05D008040 1.9e-09 65.1 53 60.4
Potri.008G152000 Populus trichocarpa HOM05D000062 ORTHO05D008040 1.9e-09 65.1 53 60.4
SEGI_20582 Sequoiadendron giganteum HOM05D000062 ORTHO05D008040 1.9e-09 65.1 53 62.3
SEGI_38754 Sequoiadendron giganteum HOM05D000062 ORTHO05D008040 1.9e-09 65.1 53 62.3
AT2G32120 Arabidopsis thaliana HOM05D000062 ORTHO05D008040 2.4e-09 64.7 53 64.2
arahy.Tifrunner.gnm1.ann1.6XM150 Arachis hypogaea HOM05D000062 ORTHO05D008040 2.4e-09 64.7 53 60.4
CARHR125910 Cardamine hirsuta HOM05D000062 ORTHO05D008040 2.4e-09 64.7 53 64.2
ClCG05G005200 Citrullus lanatus HOM05D000062 ORTHO05D008040 2.4e-09 64.7 53 62.3
Ciclev10004635m.g Citrus clementina HOM05D000062 ORTHO05D008040 2.4e-09 64.7 53 60.4
CsaV3_3G013380 Cucumis sativus L. HOM05D000062 ORTHO05D008040 2.4e-09 64.7 53 62.3
AUR62024018 Chenopodium quinoa HOM05D000062 ORTHO05D008040 3.2e-09 64.3 53 60.4
DCAR_030628 Daucus carota HOM05D000062 ORTHO05D008040 3.2e-09 64.3 53 60.4
Peaxi162Scf00092g00123 Petunia axillaris HOM05D000062 ORTHO05D008040 3.2e-09 64.3 52 61.5
Prupe.1G012200 Prunus persica HOM05D000062 ORTHO05D008040 3.2e-09 64.3 53 58.5
PGR004G2216 Punica granatum HOM05D000062 ORTHO05D008040 3.2e-09 64.3 53 60.4
QL06p002678 Quercus lobata HOM05D000062 ORTHO05D008040 3.2e-09 64.3 53 58.5
Sed0020943 Sechium edule HOM05D000062 ORTHO05D008040 3.2e-09 64.3 53 62.3
Actinidia08496 Actinidia chinensis HOM05D000062 ORTHO05D008040 4.2e-09 63.9 53 60.4
Ah.04g154520 Amaranthus hybridus HOM05D000062 ORTHO05D008040 4.2e-09 63.9 53 60.4
Potri.010G088600 Populus trichocarpa HOM05D000062 ORTHO05D008040 4.2e-09 63.9 53 56.6
SGA_v2.0_scaffold39G15248 Striga asiatica HOM05D000062 ORTHO05D008040 4.2e-09 63.9 53 62.3
arahy.Tifrunner.gnm1.ann1.462RQZ Arachis hypogaea HOM05D000062 ORTHO05D008040 5.5e-09 63.5 53 58.5
CiPaw.01G165100 Carya illinoinensis HOM05D000062 ORTHO05D008040 5.5e-09 63.5 53 58.5
COL.COLO4_05311 Corchorus olitorius HOM05D000062 ORTHO05D008040 5.5e-09 63.5 53 58.5
GSVIVG01017960001 Vitis vinifera HOM05D000062 ORTHO05D008040 5.5e-09 63.5 53 60.4
Cpa.g.sc58.117 Carica papaya HOM05D000062 ORTHO05D008040 7.1e-09 63.2 53 58.5
Cfa015634 Carpinus fangiana HOM05D000062 ORTHO05D008040 7.1e-09 63.2 53 58.5
Ca_24394_v3 Cicer arietinum L. HOM05D000062 ORTHO05D008040 7.1e-09 63.2 52 59.6
MELO3C006536.2 Cucumis melo HOM05D000062 ORTHO05D008040 7.1e-09 63.2 53 60.4
Gohir.A09G215200 Gossypium hirsutum HOM05D000062 ORTHO05D008040 7.1e-09 63.2 53 58.5
Gorai.006G238400 Gossypium raimondii HOM05D000062 ORTHO05D008040 7.1e-09 63.2 53 58.5
Lalb_Chr09g0319841 Lupinus albus HOM05D000062 ORTHO05D008040 7.1e-09 63.2 53 60.4
Medtr5g006180 Medicago truncatula HOM05D000062 ORTHO05D008040 7.1e-09 63.2 52 61.5
TPR.G37867 Trifolium pratense HOM05D000062 ORTHO05D008040 7.1e-09 63.2 52 61.5
FAN07G0848 Fragaria x ananassa HOM05D000062 ORTHO05D008040 9.3e-09 62.8 52 57.7
FAN17G2500 Fragaria x ananassa HOM05D000062 ORTHO05D008040 9.3e-09 62.8 52 57.7
TAR365G0407 Trochodendron aralioides HOM05D000062 ORTHO05D008040 9.3e-09 62.8 53 60.4
VMungo1215G2717 Vigna mungo HOM05D000062 ORTHO05D008040 9.3e-09 62.8 52 59.6
Sabra10G0054400 Salix brachista HOM05D000062 ORTHO05D008040 1.2e-08 62.4 53 54.7
Hund12137 Selenicereus undatus HOM05D000062 ORTHO05D008040 1.2e-08 62.4 53 56.6
Thecc.04G230400 Theobroma cacao HOM05D000062 ORTHO05D008040 1.2e-08 62.4 53 56.6
FAN22G2250 Fragaria x ananassa HOM05D000062 ORTHO05D008040 1.6e-08 62.0 52 55.8
Lj1g0020820 Lotus japonicus HOM05D000062 ORTHO05D008040 1.6e-08 62.0 52 59.6
RcHm_v2.0_Chr4g0416401 Rosa chinensis HOM05D000062 ORTHO05D008040 1.6e-08 62.0 53 54.7
Duzib212G0736 Durio zibethinus HOM05D000062 ORTHO05D008040 2.1e-08 61.6 53 56.6
Gohir.D09G217700 Gossypium hirsutum HOM05D000062 ORTHO05D008040 2.1e-08 61.6 53 56.6
Zm00001eb400020 Zea mays HOM05D000062 ORTHO05D008040 2.1e-08 61.6 52 59.6
FvH4_4g15410 Fragaria vesca HOM05D000062 ORTHO05D008040 2.7e-08 61.2 52 55.8
FAN12G0430 Fragaria x ananassa HOM05D000062 ORTHO05D008040 2.7e-08 61.2 52 55.8
Os03g0218500 Oryza sativa ssp. japonica HOM05D000062 ORTHO05D008040 2.7e-08 61.2 52 59.6
ATR0332G079 Amborella trichopoda HOM05D000062 ORTHO05D008040 3.5e-08 60.8 53 60.4
MD13G1191900 Malus domestica HOM05D000062 ORTHO05D008040 3.5e-08 60.8 53 54.7
MD16G1192600 Malus domestica HOM05D000062 ORTHO05D008040 4.6e-08 60.5 53 54.7
Haze_00910 Corylus avellana HOM05D000062 ORTHO05D008040 6.0e-08 60.1 53 54.7
ECA236G3103 Erigeron canadensis HOM05D000014 ORTHO05D000093 7.9e-08 59.7 53 54.7
Lsat_1_v5_gn_9_81121 Lactuca sativa HOM05D000062 ORTHO05D008040 1.3e-07 58.9 53 56.6
CDE06G1449 Ceratophyllum demersum HOM05D000062 ORTHO05D008040 2.3e-07 58.2 53 49.1
Gohir.A09G215250 Gossypium hirsutum HOM05D000062 ORTHO05D008040 3.0e-07 57.8 53 54.7
TPR.G7997 Trifolium pratense HOM05D000062 ORTHO05D008040 8.7e-07 56.2 53 56.6
Gohir.D09G217750 Gossypium hirsutum HOM05D000062 ORTHO05D008040 1.1e-06 55.8 53 52.8
Ca_21652_v3 Cicer arietinum L. HOM05D000062 ORTHO05D008040 1.9e-06 55.1 52 55.8
CDE02G3723 Ceratophyllum demersum HOM05D000062 ORTHO05D008040 2.5e-06 54.7 53 45.3
Gorai.006G238600 Gossypium raimondii HOM05D000062 ORTHO05D008040 5.6e-06 53.5 53 50.9


User provided reference genes

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