Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO301G0037 Selaginella moellendorffii HOM05D006144 ORTHO05D006357 0.0e+00 2541.9 1355 100.0
Mapoly0063s0038 Marchantia polymorpha HOM05D006144 ORTHO05D006357 3.8e-106 391.0 1008 31.2
Mapoly0063s0034 Marchantia polymorpha HOM05D006144 ORTHO05D006357 9.4e-105 386.3 841 32.3
FAN23G0857 Fragaria x ananassa HOM05D006144 ORTHO05D006357 1.2e-72 279.6 804 28.1
FAN28G0789 Fragaria x ananassa HOM05D006144 ORTHO05D006357 2.3e-71 275.4 799 28.2
FvH4_1g15710 Fragaria vesca HOM05D006144 ORTHO05D006357 3.1e-71 275.0 780 28.3
FAN19G3143 Fragaria x ananassa HOM05D006144 ORTHO05D006357 4.0e-71 274.6 786 28.2
Rhsim10G0119800 Rhododendron simsii HOM05D006144 ORTHO05D006357 4.4e-70 271.2 802 28.1
FAN26G0177 Fragaria x ananassa HOM05D006144 ORTHO05D006357 9.8e-70 270.0 941 26.7
MD15G1281500 Malus domestica HOM05D006144 ORTHO05D006357 1.4e-68 266.2 1177 27.1
RcHm_v2.0_Chr2g0105021 Rosa chinensis HOM05D006144 ORTHO05D006357 1.9e-68 265.8 805 27.3
MD02G1169100 Malus domestica HOM05D006144 ORTHO05D006357 1.6e-67 262.7 1180 25.4
ATR0104G015 Amborella trichopoda HOM05D006144 ORTHO05D006357 3.5e-67 261.5 757 27.1
Gorai.007G053500 Gossypium raimondii HOM05D006144 ORTHO05D006357 4.6e-67 261.2 800 26.8
QL06p042250 Quercus lobata HOM05D006144 ORTHO05D006357 1.3e-66 259.6 782 28.1
arahy.Tifrunner.gnm1.ann1.AH11HU Arachis hypogaea HOM05D006144 ORTHO05D006357 2.3e-66 258.8 782 26.3
arahy.Tifrunner.gnm1.ann1.IY5EPV Arachis hypogaea HOM05D006144 ORTHO05D006357 3.9e-66 258.1 782 26.6
Gohir.D11G049700 Gossypium hirsutum HOM05D006144 ORTHO05D006357 3.9e-66 258.1 800 26.5
Atru.chr3.396 Acer truncatum HOM05D006144 ORTHO05D006357 1.1e-65 256.5 970 26.7
Potri.005G136600 Populus trichocarpa HOM05D006144 ORTHO05D006357 2.5e-65 255.4 787 27.7
Sabra07G0036900 Salix brachista HOM05D006144 ORTHO05D006357 3.3e-65 255.0 947 26.5
CSS0044544 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 7.3e-65 253.8 785 27.1
Glyma.01G184700 Glycine max HOM05D006144 ORTHO05D006357 2.1e-64 252.3 778 26.1
Haze_15426 Corylus avellana HOM05D006144 ORTHO05D006357 8.0e-64 250.4 966 26.7
Thecc.01G052700 Theobroma cacao HOM05D006144 ORTHO05D006357 1.1e-63 250.0 777 27.4
Ciclev10024721m.g Citrus clementina HOM05D006144 ORTHO05D006357 1.4e-63 249.6 963 25.8
DCAR_025720 Daucus carota HOM05D006144 ORTHO05D006357 1.8e-63 249.2 947 25.2
COL.COLO4_22183 Corchorus olitorius HOM05D006144 ORTHO05D006357 3.1e-63 248.4 772 27.1
Sopen03g008900 Solanum pennellii HOM05D006144 ORTHO05D006357 4.0e-63 248.1 757 25.4
Lalb_Chr16g0388301 Lupinus albus HOM05D006144 ORTHO05D006357 6.8e-63 247.3 929 26.0
Actinidia36503 Actinidia chinensis HOM05D006144 ORTHO05D006357 1.2e-62 246.5 774 26.6
Nitab4.5_0000382g0030 Nicotiana tabacum HOM05D006144 ORTHO05D006357 1.2e-62 246.5 770 26.2
CSS0009151 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 2.6e-62 245.4 792 25.4
Glyma.11G057500 Glycine max HOM05D006144 ORTHO05D006357 2.6e-62 245.4 776 25.8
Potri.007G041300 Populus trichocarpa HOM05D006144 ORTHO05D006357 3.4e-62 245.0 992 24.9
TWI09G0039 Tripterygium wilfordii HOM05D006144 ORTHO05D006357 3.4e-62 245.0 773 27.3
Cc07_g05860 Coffea canephora HOM05D006144 ORTHO05D006357 4.4e-62 244.6 783 25.5
CSS0011451 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 5.8e-62 244.2 792 25.4
PGSC0003DMG400019754 Solanum tuberosum HOM05D006144 ORTHO05D006357 5.8e-62 244.2 776 25.8
Cfa003998 Carpinus fangiana HOM05D006144 ORTHO05D006357 9.8e-62 243.4 947 26.8
Manes.12G100500 Manihot esculenta HOM05D006144 ORTHO05D006357 9.8e-62 243.4 777 26.3
Peaxi162Scf00183g00711 Petunia axillaris HOM05D006144 ORTHO05D006357 1.3e-61 243.0 778 25.3
Nitab4.5_0001684g0030 Nicotiana tabacum HOM05D006144 ORTHO05D006357 1.7e-61 242.7 763 26.9
Gohir.A11G046100 Gossypium hirsutum HOM05D006144 ORTHO05D006357 3.7e-61 241.5 957 25.8
Ca_24781_v3 Cicer arietinum L. HOM05D006144 ORTHO05D006357 6.4e-61 240.7 914 25.6
Nn1g05861 Nelumbo nucifera HOM05D006144 ORTHO05D006357 6.4e-61 240.7 754 27.1
Duzib147G1467 Durio zibethinus HOM05D006144 ORTHO05D006357 1.1e-60 240.0 766 26.1
VMungo1215G0092 Vigna mungo HOM05D006144 ORTHO05D006357 1.1e-60 240.0 787 26.6
Hma1.2p1_0200F.1_g086100 Hydrangea macrophylla HOM05D006144 ORTHO05D006357 1.9e-60 239.2 803 26.4
Psat0s3889g0080 Pisum sativum HOM05D006144 ORTHO05D006357 1.9e-60 239.2 946 24.6
Prupe.7G136200 Prunus persica HOM05D006144 ORTHO05D006357 2.4e-60 238.8 959 25.9
Actinidia12060 Actinidia chinensis HOM05D006144 ORTHO05D006357 4.1e-60 238.0 941 25.3
CAN.G11.1 Capsicum annuum HOM05D006144 ORTHO05D006357 4.1e-60 238.0 772 25.3
MSTRG.2895 Avicennia marina HOM05D006144 ORTHO05D006357 1.2e-59 236.5 779 25.8
Phvul.002G020300 Phaseolus vulgaris HOM05D006144 ORTHO05D006357 1.2e-59 236.5 930 24.8
Solyc03g044620.4 Solanum lycopersicum HOM05D006144 ORTHO05D006357 2.1e-59 235.7 933 25.2
CANSAT01G0270 Cannabis sativa HOM05D006144 ORTHO05D006357 4.6e-59 234.6 1135 24.9
Oeu003786.1 Olea europaea HOM05D006144 ORTHO05D006357 1.0e-58 233.4 786 25.3
ClCG01G016710 Citrullus lanatus HOM05D006144 ORTHO05D006357 1.7e-58 232.6 929 26.0
Oeu049306.1 Olea europaea HOM05D006144 ORTHO05D006357 2.3e-58 232.3 770 24.7
TPR.G31101 Trifolium pratense HOM05D006144 ORTHO05D006357 2.3e-58 232.3 929 25.4
Lalb_Chr09g0333701 Lupinus albus HOM05D006144 ORTHO05D006357 3.9e-58 231.5 933 26.0
Sed0018548 Sechium edule HOM05D006144 ORTHO05D006357 8.6e-58 230.3 806 26.7
PGR102G0121 Punica granatum HOM05D006144 ORTHO05D006357 1.5e-57 229.6 770 26.2
Lj2g0024358 Lotus japonicus HOM05D006144 ORTHO05D006357 3.3e-57 228.4 904 24.6
Os03g0186500 Oryza sativa ssp. japonica HOM05D006144 ORTHO05D006357 1.2e-56 226.5 938 26.1
Migut.H00451 Erythranthe guttata HOM05D006144 ORTHO05D006357 3.6e-56 224.9 927 25.4
Aqoxy6G01406 Aquilegia oxysepala HOM05D006144 ORTHO05D006357 4.7e-56 224.6 991 25.9
vmacro05326 Vaccinium macrocarpon HOM05D006144 ORTHO05D006357 4.7e-56 224.6 1059 24.2
Zm00001eb006470 Zea mays HOM05D006144 ORTHO05D006357 4.7e-56 224.6 933 25.5
HanXRQChr14g0430551 Helianthus annuus HOM05D006144 ORTHO05D006357 2.3e-55 222.2 760 26.3
Sc03g0001430 Simmondsia chinensis HOM05D006144 ORTHO05D006357 6.8e-55 220.7 917 26.1
MELO3C007550.2 Cucumis melo HOM05D006144 ORTHO05D006357 5.8e-54 217.6 941 25.8
CsaV3_6G043130 Cucumis sativus L. HOM05D006144 ORTHO05D006357 9.9e-54 216.9 939 25.5
Hund13563 Selenicereus undatus HOM05D006144 ORTHO05D006357 1.9e-52 212.6 962 24.8
AUR62001952 Chenopodium quinoa HOM05D006144 ORTHO05D006357 2.4e-52 212.2 939 25.5
Nn5g30196 Nelumbo nucifera HOM05D006144 ORTHO05D006357 3.2e-52 211.8 1134 24.3
THA.LOC104826201 Tarenaya hassleriana HOM05D006144 ORTHO05D006357 3.2e-52 211.8 920 25.3
AUR62003855 Chenopodium quinoa HOM05D006144 ORTHO05D006357 1.6e-51 209.5 933 25.7
ECA232G0891 Erigeron canadensis HOM05D006144 ORTHO05D006357 3.5e-51 208.4 891 22.7
MBI06_g08189_MAGBIO Magnolia biondii HOM05D006144 ORTHO05D006357 6.0e-51 207.6 700 26.0
SGA_v2.0_scaffold204G41590 Striga asiatica HOM05D006144 ORTHO05D006357 6.0e-51 207.6 955 23.7
CDE03G0440 Ceratophyllum demersum HOM05D006144 ORTHO05D006357 7.8e-51 207.2 754 25.6
Ah.03g144510 Amaranthus hybridus HOM05D006144 ORTHO05D006357 1.0e-50 206.8 1021 25.1
EL10Ac6g15152 Beta vulgaris HOM05D006144 ORTHO05D006357 1.3e-50 206.5 936 24.0
CiPaw.01G021400 Carya illinoinensis HOM05D006144 ORTHO05D006357 3.3e-49 201.8 1189 23.8
HPP92_004081 Vanilla planifolia HOM05D006144 ORTHO05D006357 7.3e-49 200.7 929 22.3
Eucgr.H01999 Eucalyptus grandis HOM05D006144 ORTHO05D006357 1.2e-48 199.9 1143 23.7
Lsat_1_v5_gn_4_167780 Lactuca sativa HOM05D006144 ORTHO05D006357 2.6e-46 192.2 932 24.8
Dinv29969 Davidia involucrata HOM05D006144 ORTHO05D006357 1.1e-44 186.8 966 24.7
THA.LOC104804508 Tarenaya hassleriana HOM05D006144 ORTHO05D006357 7.1e-44 184.1 892 24.7
Dinv39873 Davidia involucrata HOM05D006144 ORTHO05D006357 1.9e-41 176.0 711 23.6
TAR381G1042 Trochodendron aralioides HOM05D006144 ORTHO05D006357 1.7e-34 152.9 298 31.2
Oeu004869.1 Olea europaea HOM05D006144 ORTHO05D006357 3.9e-34 151.8 985 21.4
SEGI_17223 Sequoiadendron giganteum HOM05D006144 ORTHO05D006357 6.6e-34 151.0 322 32.0
SEGI_14166 Sequoiadendron giganteum HOM05D006144 ORTHO05D006357 8.7e-34 150.6 388 30.4
Cpa.g.sc55.182 Carica papaya HOM05D006144 ORTHO05D006357 1.6e-32 146.4 312 26.9
GSVIVG01002633001 Vitis vinifera HOM05D006144 ORTHO05D006357 6.2e-32 144.4 383 28.5
PSO675G0817 Papaver somniferum HOM05D006144 ORTHO05D006357 3.1e-31 142.1 320 28.4
Ca_22186_v3 Cicer arietinum L. HOM05D006144 ORTHO05D006357 7.6e-30 137.5 299 29.4
Lj4C140T7 Lonicera japonica HOM05D006144 ORTHO05D006357 1.3e-29 136.7 534 25.3
TPR.G640 Trifolium pratense HOM05D006144 ORTHO05D006357 1.3e-29 136.7 309 27.8
Lj4A140T30 Lonicera japonica HOM05D006144 ORTHO05D006357 3.2e-28 132.1 403 29.5
HPP92_004109 Vanilla planifolia HOM05D006144 ORTHO05D006357 4.2e-28 131.7 588 22.8
Psat4g089200 Pisum sativum HOM05D006144 ORTHO05D006357 2.7e-27 129.0 289 29.1
Cpa.g.sc55.178 Carica papaya HOM05D006144 ORTHO05D006357 1.0e-26 127.1 409 28.6
TAR381G0606 Trochodendron aralioides HOM05D006144 ORTHO05D006357 3.0e-26 125.6 356 27.8
unitig_736.g22372 Utricularia gibba HOM05D006144 ORTHO05D006357 4.8e-24 118.2 477 24.7
PSO541G4136 Papaver somniferum HOM05D006144 ORTHO05D006357 9.0e-23 114.0 361 24.1
CBR_g31222 Chara braunii HOM05D006144 ORTHO05D006357 2.2e-21 109.4 396 24.7
Pp3c4_25960 Physcomitrium patens HOM05D006144 ORTHO05D006357 7.9e-19 100.9 390 24.6
Pp3c26_5160 Physcomitrium patens HOM05D006144 ORTHO05D006357 4.3e-17 95.1 387 24.5
AagrBONN_evm.TU.Sc2ySwM_228.442 Anthoceros agrestis HOM05D006144 ORTHO05D006357 6.5e-13 81.3 452 22.8
Hma1.2p1_1415F.1_g282000 Hydrangea macrophylla HOM05D006144 ORTHO05D006357 3.9e-10 72.0 118 37.3
MSTRG.23764 Avicennia marina HOM05D006144 ORTHO05D006357 9.0e-07 60.8 467 22.5


User provided reference genes

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