Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO298G0052 Selaginella moellendorffii HOM05D006317 ORTHO05D007852 2.4e-45 185.3 101 100.0
AagrBONN_evm.TU.Sc2ySwM_344.4689 Anthoceros agrestis HOM05D006317 ORTHO05D007852 2.5e-31 138.7 101 72.3
Lj1g0010212 Lotus japonicus HOM05D006317 ORTHO05D007852 4.3e-31 137.9 101 71.3
Glyma.06G116700 Glycine max HOM05D006317 ORTHO05D007852 5.7e-31 137.5 101 69.3
Glyma.04G246100 Glycine max HOM05D006317 ORTHO05D007852 9.7e-31 136.7 101 69.3
Mapoly0014s0111 Marchantia polymorpha HOM05D006317 ORTHO05D007852 9.7e-31 136.7 101 68.3
VMungo1309G0699 Vigna mungo HOM05D006317 ORTHO05D007852 1.6e-30 136.0 101 70.3
MSTRG.25364 Avicennia marina HOM05D006317 ORTHO05D007852 2.2e-30 135.6 101 71.3
unitig_22.g5398 Utricularia gibba HOM05D006317 ORTHO05D007852 4.8e-30 134.4 101 69.3
arahy.Tifrunner.gnm1.ann1.0GY0RD Arachis hypogaea HOM05D006317 ORTHO05D007852 6.3e-30 134.0 101 68.3
arahy.Tifrunner.gnm1.ann1.ID1H8K Arachis hypogaea HOM05D006317 ORTHO05D007852 6.3e-30 134.0 101 68.3
CANSAT35G0412 Cannabis sativa HOM05D006317 ORTHO05D007852 6.3e-30 134.0 101 68.3
Cpa.g.sc64.145 Carica papaya HOM05D006317 ORTHO05D007852 6.3e-30 134.0 101 69.3
Peaxi162Scf01003g00121 Petunia axillaris HOM05D006317 ORTHO05D007852 6.3e-30 134.0 101 67.3
Ciclev10002865m.g Citrus clementina HOM05D006317 ORTHO05D007852 8.2e-30 133.7 101 69.3
Phvul.009G129100 Phaseolus vulgaris HOM05D006317 ORTHO05D007852 8.2e-30 133.7 101 68.3
Duzib041G0795 Durio zibethinus HOM05D006317 ORTHO05D007852 1.1e-29 133.3 101 69.3
Thecc.08G132100 Theobroma cacao HOM05D006317 ORTHO05D007852 1.1e-29 133.3 101 68.3
Migut.N03266 Erythranthe guttata HOM05D006317 ORTHO05D007852 1.4e-29 132.9 101 68.3
Potri.019G066600 Populus trichocarpa HOM05D006317 ORTHO05D007852 1.4e-29 132.9 101 68.3
Prupe.1G490600 Prunus persica HOM05D006317 ORTHO05D007852 1.4e-29 132.9 101 70.3
Atru.chr13.1550 Acer truncatum HOM05D006317 ORTHO05D007852 1.8e-29 132.5 101 71.3
MBI03_g35425_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 2.4e-29 132.1 101 67.3
Sed0004620 Sechium edule HOM05D006317 ORTHO05D007852 2.4e-29 132.1 101 68.3
TAR375G0871 Trochodendron aralioides HOM05D006317 ORTHO05D007852 3.1e-29 131.7 101 69.3
GSVIVG01036785001 Vitis vinifera HOM05D006317 ORTHO05D007852 3.1e-29 131.7 101 68.3
Eucgr.D00248 Eucalyptus grandis HOM05D006317 ORTHO05D007852 4.1e-29 131.3 101 67.3
Oeu051968.1 Olea europaea HOM05D006317 ORTHO05D007852 5.3e-29 131.0 101 67.3
Sed0014816 Sechium edule HOM05D006317 ORTHO05D007852 5.3e-29 131.0 101 67.3
MELO3C010655.2 Cucumis melo HOM05D006317 ORTHO05D007852 6.9e-29 130.6 101 67.3
Duzib116G0606 Durio zibethinus HOM05D006317 ORTHO05D007852 6.9e-29 130.6 101 68.3
Lsat_1_v5_gn_6_109060 Lactuca sativa HOM05D006317 ORTHO05D007852 6.9e-29 130.6 101 68.3
Medtr3g088525 Medicago truncatula HOM05D006317 ORTHO05D007852 6.9e-29 130.6 101 65.3
Nn1g09356 Nelumbo nucifera HOM05D006317 ORTHO05D007852 6.9e-29 130.6 101 68.3
Nitab4.5_0001168g0010 Nicotiana tabacum HOM05D006317 ORTHO05D007852 6.9e-29 130.6 101 66.3
Nitab4.5_0002045g0100 Nicotiana tabacum HOM05D006317 ORTHO05D007852 6.9e-29 130.6 101 66.3
Psat5g085080 Pisum sativum HOM05D006317 ORTHO05D007852 6.9e-29 130.6 101 66.3
RcHm_v2.0_Chr6g0296581 Rosa chinensis HOM05D006317 ORTHO05D007852 6.9e-29 130.6 101 68.3
TWI32G0551 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 6.9e-29 130.6 101 68.3
ECA246G3352 Erigeron canadensis HOM05D006317 ORTHO05D007852 9.0e-29 130.2 101 67.3
Gohir.A05G237800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 9.0e-29 130.2 101 68.3
Lalb_Chr23g0271161 Lupinus albus HOM05D006317 ORTHO05D007852 9.0e-29 130.2 101 67.3
Gohir.D05G239800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 1.2e-28 129.8 101 67.3
Gorai.009G248700 Gossypium raimondii HOM05D006317 ORTHO05D007852 1.2e-28 129.8 101 67.3
HanXRQChr05g0148711 Helianthus annuus HOM05D006317 ORTHO05D007852 1.2e-28 129.8 100 68.0
Manes.02G167400 Manihot esculenta HOM05D006317 ORTHO05D007852 1.2e-28 129.8 101 66.3
Cfa018120 Carpinus fangiana HOM05D006317 ORTHO05D007852 1.5e-28 129.4 101 67.3
ATR1101G062 Amborella trichopoda HOM05D006317 ORTHO05D007852 2.0e-28 129.0 101 66.3
CAN.G342.14 Capsicum annuum HOM05D006317 ORTHO05D007852 2.0e-28 129.0 101 66.3
CsaV3_6G034090 Cucumis sativus L. HOM05D006317 ORTHO05D007852 2.0e-28 129.0 101 66.3
FvH4_2g27730 Fragaria vesca HOM05D006317 ORTHO05D007852 2.0e-28 129.0 101 66.3
FAN20G1754 Fragaria x ananassa HOM05D006317 ORTHO05D007852 2.0e-28 129.0 101 66.3
Manes.18G081900 Manihot esculenta HOM05D006317 ORTHO05D007852 2.0e-28 129.0 101 67.3
Sc10g0008060 Simmondsia chinensis HOM05D006317 ORTHO05D007852 2.0e-28 129.0 101 68.3
Lalb_Chr08g0241161 Lupinus albus HOM05D006317 ORTHO05D007852 2.6e-28 128.6 101 67.3
SGA_v2.0_scaffold25G11134 Striga asiatica HOM05D006317 ORTHO05D007852 2.6e-28 128.6 101 64.4
FAN24G3505 Fragaria x ananassa HOM05D006317 ORTHO05D007852 3.4e-28 128.3 101 66.3
TWI34G0863 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 3.4e-28 128.3 101 67.3
unitig_8.g3836 Utricularia gibba HOM05D006317 ORTHO05D007852 3.4e-28 128.3 101 66.3
Dinv27277 Davidia involucrata HOM05D006317 ORTHO05D007852 4.5e-28 127.9 101 66.3
QL09p032738 Quercus lobata HOM05D006317 ORTHO05D007852 4.5e-28 127.9 101 65.3
Solyc11g005000.2 Solanum lycopersicum HOM05D006317 ORTHO05D007852 4.5e-28 127.9 101 66.3
Sopen11g001020 Solanum pennellii HOM05D006317 ORTHO05D007852 4.5e-28 127.9 101 66.3
PGSC0003DMG400006049 Solanum tuberosum HOM05D006317 ORTHO05D007852 7.7e-28 127.1 101 66.3
CSS0006686 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 1.3e-27 126.3 101 63.4
Hma1.2p1_0420F.1_g149670 Hydrangea macrophylla HOM05D006317 ORTHO05D007852 1.3e-27 126.3 101 66.3
Cc10_g12550 Coffea canephora HOM05D006317 ORTHO05D007852 2.2e-27 125.6 101 66.3
SalBow2G0856 Salvia bowleyana HOM05D006317 ORTHO05D007852 2.2e-27 125.6 101 65.3
Rhsim11G0071000 Rhododendron simsii HOM05D006317 ORTHO05D007852 2.9e-27 125.2 101 63.4
Aqoxy1G01739 Aquilegia oxysepala HOM05D006317 ORTHO05D007852 3.8e-27 124.8 101 66.3
CSS0008085 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 3.8e-27 124.8 101 63.4
CSS0027136 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 3.8e-27 124.8 101 63.4
THA.LOC104813677 Tarenaya hassleriana HOM05D006317 ORTHO05D007852 3.8e-27 124.8 101 67.3
CiPaw.15G032500 Carya illinoinensis HOM05D006317 ORTHO05D007852 6.5e-27 124.0 101 65.3
Dinv14667 Davidia involucrata HOM05D006317 ORTHO05D007852 6.5e-27 124.0 101 64.4
Oeu021883.1 Olea europaea HOM05D006317 ORTHO05D007852 8.5e-27 123.6 101 64.4
PGR044G1554 Punica granatum HOM05D006317 ORTHO05D007852 8.5e-27 123.6 101 65.3
Actinidia29484 Actinidia chinensis HOM05D006317 ORTHO05D007852 1.1e-26 123.2 101 64.4
AT1G77350 Arabidopsis thaliana HOM05D006317 ORTHO05D007852 1.1e-26 123.2 101 65.3
A08p28870 Brassica napus HOM05D006317 ORTHO05D007852 2.5e-26 122.1 101 65.3
C08p20980 Brassica napus HOM05D006317 ORTHO05D007852 3.2e-26 121.7 101 65.3
BolC8t49735H Brassica oleracea HOM05D006317 ORTHO05D007852 3.2e-26 121.7 101 65.3
BraA06t24865Z Brassica rapa HOM05D006317 ORTHO05D007852 4.2e-26 121.3 101 65.3
CBR_g12067 Chara braunii HOM05D006317 ORTHO05D007852 4.2e-26 121.3 101 61.4
CDE06G2198 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 5.5e-26 120.9 101 65.3
A06p17730 Brassica napus HOM05D006317 ORTHO05D007852 7.2e-26 120.6 101 65.3
Aa31LG4G7370 Aethionema arabicum HOM05D006317 ORTHO05D007852 9.4e-26 120.2 101 63.4
BcaB07g32159 Brassica carinata HOM05D006317 ORTHO05D007852 9.4e-26 120.2 101 64.4
BcaC06g34898 Brassica carinata HOM05D006317 ORTHO05D007852 9.4e-26 120.2 101 64.4
C07p22030 Brassica napus HOM05D006317 ORTHO05D007852 9.4e-26 120.2 101 64.4
BolC7t42733H Brassica oleracea HOM05D006317 ORTHO05D007852 9.4e-26 120.2 101 64.4
BcaB03g14259 Brassica carinata HOM05D006317 ORTHO05D007852 1.2e-25 119.8 101 64.4
AUR62016336 Chenopodium quinoa HOM05D006317 ORTHO05D007852 1.2e-25 119.8 101 64.4
BraA08t34818Z Brassica rapa HOM05D006317 ORTHO05D007852 1.6e-25 119.4 101 63.4
Carub.0002s2423 Capsella rubella HOM05D006317 ORTHO05D007852 1.6e-25 119.4 101 63.4
Thhalv10019323m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 1.6e-25 119.4 101 63.4
Zm00001eb128810 Zea mays HOM05D006317 ORTHO05D007852 2.1e-25 119.0 101 63.4
A07p14980 Brassica napus HOM05D006317 ORTHO05D007852 3.6e-25 118.2 101 63.4
BraA07t29244Z Brassica rapa HOM05D006317 ORTHO05D007852 3.6e-25 118.2 101 63.4
CARHR070830 Cardamine hirsuta HOM05D006317 ORTHO05D007852 3.6e-25 118.2 101 63.4
CDE07G1891 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 4.6e-25 117.9 101 64.4
Sp1g19190 Schrenkiella parvula HOM05D006317 ORTHO05D007852 7.9e-25 117.1 101 62.4
Os05g0486200 Oryza sativa ssp. japonica HOM05D006317 ORTHO05D007852 1.0e-24 116.7 101 63.4
Ah.01g020580 Amaranthus hybridus HOM05D006317 ORTHO05D007852 1.5e-23 112.8 101 60.4
Thhalv10009123m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 2.0e-23 112.5 102 61.8
HPP92_021212 Vanilla planifolia HOM05D006317 ORTHO05D007852 2.0e-23 112.5 101 61.4
MBI06_g36652_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 2.5e-23 112.1 101 61.4
Sabra19G0078300 Salix brachista HOM05D006317 ORTHO05D007852 9.7e-23 110.2 115 56.5
SHI09189 Sapria himalayana HOM05D006317 ORTHO05D007852 9.7e-23 110.2 112 56.2
COL.COLO4_05688 Corchorus olitorius HOM05D006317 ORTHO05D007852 1.3e-22 109.8 88 68.2
AL2G37550 Arabidopsis lyrata HOM05D006317 ORTHO05D007852 4.8e-22 107.8 126 52.4
FAN27G3154 Fragaria x ananassa HOM05D006317 ORTHO05D007852 1.8e-21 105.9 85 64.7
ClCG08G005990 Citrullus lanatus HOM05D006317 ORTHO05D007852 2.4e-21 105.5 151 44.4
vmacro16444 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 5.3e-21 104.4 86 62.8
vmacro00858 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 6.9e-21 104.0 93 62.4
EL10Ac9g21899 Beta vulgaris HOM05D006317 ORTHO05D007852 6.5e-19 97.4 85 61.2
Nn7g37402 Nelumbo nucifera HOM05D006317 ORTHO05D007852 2.1e-17 92.4 70 68.6
BcaB03g14260 Brassica carinata HOM05D006317 ORTHO05D007852 1.8e-13 79.3 115 47.0
DCAR_018876 Daucus carota HOM05D006317 ORTHO05D007852 4.5e-12 74.7 63 65.1
Haze_17997 Corylus avellana HOM05D001650 ORTHO05D001592 1.5e-10 69.7 49 67.3
Gohir.A02G071601 Gossypium hirsutum HOM05D006317 ORTHO05D007852 7.2e-10 67.4 52 71.2
CSS0043705 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 6.7e-08 60.8 46 65.2
SGA_v2.0_scaffold28G11977 Striga asiatica HOM05D006317 ORTHO05D007852 8.8e-08 60.5 47 68.1


User provided reference genes

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