Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO298G0012 Selaginella moellendorffii HOM05D000033 ORTHO05D378134 1.4e-52 209.5 119 100.0
GSVIVG01024236001 Vitis vinifera HOM05D000033 ORTHO05D010048 1.0e-10 70.5 119 35.3
Solyc02g093100.3 Solanum lycopersicum HOM05D000033 ORTHO05D003265 2.9e-10 68.9 119 31.1
MBI06_g43812_MAGBIO Magnolia biondii HOM05D000033 ORTHO05D010048 2.5e-09 65.9 119 33.6
Prupe.1G067000 Prunus persica HOM05D000071 ORTHO05D000029 2.5e-09 65.9 115 30.4
Carub.0008s0572 Capsella rubella HOM05D000033 ORTHO05D003265 3.2e-09 65.5 115 32.2
MBI06_g39057_MAGBIO Magnolia biondii HOM05D000033 ORTHO05D010048 9.4e-09 63.9 119 33.6
Lalb_Chr09g0333841 Lupinus albus HOM05D000033 ORTHO05D003265 1.6e-08 63.2 116 31.0
Peaxi162Scf00549g00220 Petunia axillaris HOM05D000033 ORTHO05D003265 6.1e-08 61.2 142 39.4
vmacro05263 Vaccinium macrocarpon HOM05D000033 ORTHO05D003265 6.1e-08 61.2 138 38.4
Gohir.A04G144300 Gossypium hirsutum HOM05D000033 ORTHO05D006059 7.9e-08 60.8 140 38.6
Oeu017446.2 Olea europaea HOM05D000033 ORTHO05D003265 1.0e-07 60.5 142 36.6
Gohir.D04G188900 Gossypium hirsutum HOM05D000033 ORTHO05D006059 1.4e-07 60.1 140 37.9
Gorai.012G184100 Gossypium raimondii HOM05D000033 ORTHO05D006059 1.4e-07 60.1 140 37.9
Potri.017G154700 Populus trichocarpa HOM05D000033 ORTHO05D010048 1.4e-07 60.1 119 32.8
PGR042G0676 Punica granatum HOM05D000033 ORTHO05D010114 1.4e-07 60.1 115 33.0
Potri.004G066300 Populus trichocarpa HOM05D000033 ORTHO05D010048 1.8e-07 59.7 119 31.9
SalBow2G1801 Salvia bowleyana HOM05D000033 ORTHO05D006059 1.8e-07 59.7 138 41.3
AT1G10850 Arabidopsis thaliana HOM05D000033 ORTHO05D006059 2.3e-07 59.3 138 39.1
Gohir.A02G155000 Gossypium hirsutum HOM05D000033 ORTHO05D002493 2.3e-07 59.3 116 31.9
Manes.07G079501 Manihot esculenta HOM05D000033 ORTHO05D006059 3.9e-07 58.5 141 39.0
PGR083G0323 Punica granatum HOM05D000033 ORTHO05D010048 3.9e-07 58.5 116 31.9
Cpa.g.sc2.107 Carica papaya HOM05D000033 ORTHO05D006059 5.1e-07 58.2 138 39.1
Glyma.16G210100 Glycine max HOM05D000033 ORTHO05D010048 5.1e-07 58.2 116 30.2
Gohir.D03G025700 Gossypium hirsutum HOM05D000033 ORTHO05D002493 5.1e-07 58.2 116 31.9
Oeu038391.1 Olea europaea HOM05D000033 ORTHO05D010048 5.1e-07 58.2 119 28.6
Aqoxy5G01175 Aquilegia oxysepala HOM05D000033 ORTHO05D003265 6.7e-07 57.8 138 37.0
Dinv26542 Davidia involucrata HOM05D000033 ORTHO05D006059 6.7e-07 57.8 141 37.6
arahy.Tifrunner.gnm1.ann1.6PC141 Arachis hypogaea HOM05D000033 ORTHO05D010048 8.8e-07 57.4 116 31.0
DCAR_026861 Daucus carota HOM05D000033 ORTHO05D006059 8.8e-07 57.4 140 39.3
Migut.B00620 Erythranthe guttata HOM05D000033 ORTHO05D010114 8.8e-07 57.4 108 32.4
Eucgr.H00987 Eucalyptus grandis HOM05D000053 ORTHO05D000035 8.8e-07 57.4 115 29.6
Eucgr.H01783 Eucalyptus grandis HOM05D000033 ORTHO05D003265 8.8e-07 57.4 50 50.0
CSS0006077 Camellia sinensis var. sinensis HOM05D000033 ORTHO05D010114 1.1e-06 57.0 115 32.2
Haze_18059 Corylus avellana HOM05D000033 ORTHO05D003265 1.1e-06 57.0 138 37.0
Medtr6g069030 Medicago truncatula HOM05D000033 ORTHO05D010048 1.1e-06 57.0 115 30.4
SalBow6G3765 Salvia bowleyana HOM05D000033 ORTHO05D010114 1.1e-06 57.0 115 31.3
SalBow6G4095 Salvia bowleyana HOM05D000033 ORTHO05D010114 1.1e-06 57.0 115 31.3
Sopen04g003810 Solanum pennellii HOM05D000033 ORTHO05D006059 1.1e-06 57.0 139 39.6
TPR.G31351 Trifolium pratense HOM05D000033 ORTHO05D010048 1.1e-06 57.0 115 31.3
GSVIVG01010230001 Vitis vinifera HOM05D000033 ORTHO05D006059 1.1e-06 57.0 142 38.7
arahy.Tifrunner.gnm1.ann1.58NNF2 Arachis hypogaea HOM05D000033 ORTHO05D010048 1.5e-06 56.6 120 31.7
CSS0031959 Camellia sinensis var. sinensis HOM05D000033 ORTHO05D002890 1.5e-06 56.6 115 29.6
Solyc04g008650.4 Solanum lycopersicum HOM05D000033 ORTHO05D006059 1.5e-06 56.6 139 39.6
VMungo0464G0133 Vigna mungo HOM05D000033 ORTHO05D010048 1.5e-06 56.6 116 31.9
MSTRG.2865 Avicennia marina HOM05D000033 ORTHO05D003265 2.0e-06 56.2 54 44.4
Lj3g0005638 Lotus japonicus HOM05D000033 ORTHO05D006059 2.6e-06 55.8 138 34.1
SalBow2G3311 Salvia bowleyana HOM05D000033 ORTHO05D006059 2.6e-06 55.8 138 41.3
Sopen01g047620 Solanum pennellii HOM05D000033 ORTHO05D010114 2.6e-06 55.8 108 31.5
Oeu001127.1 Olea europaea HOM05D000033 ORTHO05D006059 3.3e-06 55.5 138 39.9
Sp1g09550 Schrenkiella parvula HOM05D000033 ORTHO05D006059 3.3e-06 55.5 142 37.3
Ciclev10000518m.g Citrus clementina HOM05D000033 ORTHO05D003265 4.4e-06 55.1 138 37.7
CSS0036892 Camellia sinensis var. sinensis HOM05D000033 ORTHO05D010114 5.7e-06 54.7 108 32.4
CAN.G523.80 Capsicum annuum HOM05D000033 ORTHO05D010114 5.7e-06 54.7 108 31.5
Medtr5g086620 Medicago truncatula HOM05D000053 ORTHO05D000035 5.7e-06 54.7 113 29.2
Sabra04G0044300 Salix brachista HOM05D000033 ORTHO05D010048 5.7e-06 54.7 119 31.1
SHI18861 Sapria himalayana HOM05D000029 ORTHO05D002544 5.7e-06 54.7 112 28.6
TAR629G0956 Trochodendron aralioides HOM05D000033 ORTHO05D006059 5.7e-06 54.7 138 39.9
CDE05G1100 Ceratophyllum demersum HOM05D000033 ORTHO05D002890 7.4e-06 54.3 140 29.3
Eucgr.A00700 Eucalyptus grandis HOM05D000053 ORTHO05D000448 7.4e-06 54.3 114 32.5
Gorai.003G027300 Gossypium raimondii HOM05D000033 ORTHO05D002493 7.4e-06 54.3 112 31.2
Pp3c16_6190 Physcomitrium patens HOM05D000029 ORTHO05D000010 7.4e-06 54.3 46 47.8
Ciclev10018213m.g Citrus clementina HOM05D000053 ORTHO05D000035 9.7e-06 53.9 113 31.9
Haze_18065 Corylus avellana HOM05D000033 ORTHO05D003265 9.7e-06 53.9 138 36.2
Eucgr.J01835 Eucalyptus grandis HOM05D000033 ORTHO05D006059 9.7e-06 53.9 140 39.3
Nn7g37217 Nelumbo nucifera HOM05D000033 ORTHO05D006059 9.7e-06 53.9 106 34.9
Phvul.004G136100 Phaseolus vulgaris HOM05D000033 ORTHO05D010048 9.7e-06 53.9 119 31.1
SalBow5G1245 Salvia bowleyana HOM05D000033 ORTHO05D010048 9.7e-06 53.9 117 29.9


User provided reference genes

Program Settings