Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO290G0001 Selaginella moellendorffii HOM05D006525 ORTHO05D007845 3.6e-123 444.9 219 100.0
vmacro11437 Vaccinium macrocarpon HOM05D006525 ORTHO05D007845 6.4e-72 274.6 199 64.8
Dinv37543 Davidia involucrata HOM05D006525 ORTHO05D007845 4.2e-71 271.9 202 63.9
CSS0006968 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 2.1e-70 269.6 201 64.7
Medtr8g099380 Medicago truncatula HOM05D006525 ORTHO05D007845 2.7e-70 269.2 213 59.2
Rhsim02G0241900 Rhododendron simsii HOM05D006525 ORTHO05D007845 3.5e-70 268.9 202 63.9
Actinidia22144 Actinidia chinensis HOM05D006525 ORTHO05D007845 6.0e-70 268.1 197 65.0
Lalb_Chr16g0390611 Lupinus albus HOM05D006525 ORTHO05D007845 1.8e-69 266.5 213 58.2
FAN13G2324 Fragaria x ananassa HOM05D006525 ORTHO05D007845 6.7e-69 264.6 212 60.8
BcaB02g07875 Brassica carinata HOM05D006525 ORTHO05D007845 8.7e-69 264.2 202 61.4
Ca_17485_v3 Cicer arietinum L. HOM05D006525 ORTHO05D007845 8.7e-69 264.2 202 60.9
DCAR_027712 Daucus carota HOM05D006525 ORTHO05D007845 8.7e-69 264.2 211 61.1
FAN18G4350 Fragaria x ananassa HOM05D006525 ORTHO05D007845 1.1e-68 263.8 212 60.8
PSO384G4490 Papaver somniferum HOM05D006525 ORTHO05D007845 1.5e-68 263.5 201 64.2
Aa31LG9G310 Aethionema arabicum HOM05D006525 ORTHO05D007845 1.9e-68 263.1 202 62.4
Lj4g0012415 Lotus japonicus HOM05D006525 ORTHO05D007845 1.9e-68 263.1 202 60.4
Psat7g027440 Pisum sativum HOM05D006525 ORTHO05D007845 1.9e-68 263.1 202 61.4
RcHm_v2.0_Chr7g0195151 Rosa chinensis HOM05D006525 ORTHO05D007845 1.9e-68 263.1 202 61.9
THA.LOC104817658 Tarenaya hassleriana HOM05D006525 ORTHO05D007845 3.3e-68 262.3 194 64.9
Atru.chr9.2016 Acer truncatum HOM05D006525 ORTHO05D007845 4.3e-68 261.9 201 61.7
AT5G41850 Arabidopsis thaliana HOM05D006525 ORTHO05D007845 4.3e-68 261.9 202 60.4
Gorai.007G025600 Gossypium raimondii HOM05D006525 ORTHO05D007845 5.6e-68 261.5 204 60.8
Hma1.2p1_0359F.1_g135310 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 5.6e-68 261.5 199 62.8
QL02p030956 Quercus lobata HOM05D006525 ORTHO05D007845 5.6e-68 261.5 201 62.2
EL10Ac5g12902 Beta vulgaris HOM05D006525 ORTHO05D007845 9.6e-68 260.8 203 59.6
Duzib068G0461 Durio zibethinus HOM05D006525 ORTHO05D007845 9.6e-68 260.8 204 61.3
BcaC08g44560 Brassica carinata HOM05D006525 ORTHO05D007845 1.6e-67 260.0 202 60.9
C06p20270 Brassica napus HOM05D006525 ORTHO05D007845 2.1e-67 259.6 202 60.9
BolC6t37207H Brassica oleracea HOM05D006525 ORTHO05D007845 2.1e-67 259.6 202 60.9
BraA07t29782Z Brassica rapa HOM05D006525 ORTHO05D007845 2.1e-67 259.6 202 60.9
CANSAT21G0126 Cannabis sativa HOM05D006525 ORTHO05D007845 2.1e-67 259.6 202 60.9
Carub.0007s3351 Capsella rubella HOM05D006525 ORTHO05D007845 2.1e-67 259.6 217 56.7
AUR62019825 Chenopodium quinoa HOM05D006525 ORTHO05D007845 2.8e-67 259.2 204 59.8
MSTRG.11933 Avicennia marina HOM05D006525 ORTHO05D007845 3.7e-67 258.8 215 58.6
Thecc.03G295800 Theobroma cacao HOM05D006525 ORTHO05D007845 3.7e-67 258.8 213 59.2
Prupe.5G117200 Prunus persica HOM05D006525 ORTHO05D007845 4.8e-67 258.5 202 60.4
A07p20960 Brassica napus HOM05D006525 ORTHO05D007845 6.2e-67 258.1 201 60.7
CARHR212710 Cardamine hirsuta HOM05D006525 ORTHO05D007845 6.2e-67 258.1 202 60.4
Gohir.D11G024000 Gossypium hirsutum HOM05D006525 ORTHO05D007845 6.2e-67 258.1 204 59.8
Ciclev10022095m.g Citrus clementina HOM05D006525 ORTHO05D007845 8.1e-67 257.7 202 60.4
ECA240G1071 Erigeron canadensis HOM05D006525 ORTHO05D007845 8.1e-67 257.7 211 61.1
Aqoxy5G04177 Aquilegia oxysepala HOM05D006525 ORTHO05D007845 1.1e-66 257.3 198 61.1
CiPaw.11G122700 Carya illinoinensis HOM05D006525 ORTHO05D007845 1.1e-66 257.3 202 61.4
Cfa022937 Carpinus fangiana HOM05D006525 ORTHO05D007845 1.4e-66 256.9 198 60.6
FAN08G2482 Fragaria x ananassa HOM05D000027 ORTHO05D007845 1.4e-66 256.9 212 59.0
Glyma.08G022100 Glycine max HOM05D006525 ORTHO05D007845 1.4e-66 256.9 214 57.9
Os05g0214400 Oryza sativa ssp. japonica HOM05D006525 ORTHO05D007845 1.4e-66 256.9 201 59.2
Sp7g00260 Schrenkiella parvula HOM05D006525 ORTHO05D007845 1.4e-66 256.9 214 56.1
Zm00001eb283820 Zea mays HOM05D006525 ORTHO05D007845 1.4e-66 256.9 200 60.5
Haze_08630 Corylus avellana HOM05D006525 ORTHO05D007845 1.8e-66 256.5 199 60.8
MD14G1123300 Malus domestica HOM05D006525 ORTHO05D007845 1.8e-66 256.5 202 59.9
Sabra01G0069100 Salix brachista HOM05D006525 ORTHO05D007845 1.8e-66 256.5 201 59.2
VMungo0251G1352 Vigna mungo HOM05D006525 ORTHO05D007845 1.8e-66 256.5 199 60.8
GSVIVG01019512001 Vitis vinifera HOM05D006525 ORTHO05D007845 1.8e-66 256.5 201 60.2
AL7G47380 Arabidopsis lyrata HOM05D006525 ORTHO05D007845 2.4e-66 256.1 202 59.4
SalBow1G4596 Salvia bowleyana HOM05D006525 ORTHO05D007845 2.4e-66 256.1 202 60.4
TWI15G0402 Tripterygium wilfordii HOM05D006525 ORTHO05D007845 4.0e-66 255.4 204 59.8
Phvul.002G297400 Phaseolus vulgaris HOM05D006525 ORTHO05D007845 6.9e-66 254.6 202 60.4
Cc08_g15920 Coffea canephora HOM05D006525 ORTHO05D007845 1.2e-65 253.8 204 58.3
PGR031G0465 Punica granatum HOM05D006525 ORTHO05D007845 1.2e-65 253.8 198 60.6
SalBow1G2372 Salvia bowleyana HOM05D006525 ORTHO05D007845 1.2e-65 253.8 202 59.9
HPP92_000617 Vanilla planifolia HOM05D006525 ORTHO05D007845 1.5e-65 253.4 209 57.4
arahy.Tifrunner.gnm1.ann1.3UM0RM Arachis hypogaea HOM05D006525 ORTHO05D007845 2.0e-65 253.1 207 59.9
CAN.G532.106 Capsicum annuum HOM05D006525 ORTHO05D007845 3.4e-65 252.3 200 60.0
Potri.001G092800 Populus trichocarpa HOM05D006525 ORTHO05D007845 5.8e-65 251.5 211 56.9
Sopen08g030430 Solanum pennellii HOM05D006525 ORTHO05D007845 1.7e-64 250.0 212 56.1
Migut.A00669 Erythranthe guttata HOM05D006525 ORTHO05D007845 2.2e-64 249.6 191 61.8
Gohir.A11G024300 Gossypium hirsutum HOM05D006525 ORTHO05D007845 2.2e-64 249.6 204 59.3
Manes.01G047000 Manihot esculenta HOM05D006525 ORTHO05D007845 2.2e-64 249.6 195 61.0
PSO339G1283 Papaver somniferum HOM05D006525 ORTHO05D007845 2.2e-64 249.6 210 59.5
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 2.9e-64 249.2 222 57.2
Cpa.g.sc79.53 Carica papaya HOM05D006525 ORTHO05D007845 3.8e-64 248.8 201 58.7
Hund11396 Selenicereus undatus HOM05D006525 ORTHO05D007845 4.9e-64 248.4 200 60.0
MELO3C005745.2 Cucumis melo HOM05D006525 ORTHO05D007845 1.9e-63 246.5 202 56.9
PGSC0003DMG400012159 Solanum tuberosum HOM05D006525 ORTHO05D007845 1.9e-63 246.5 212 56.1
HanXRQChr13g0415031 Helianthus annuus HOM05D006525 ORTHO05D007845 2.5e-63 246.1 204 57.8
Sed0028109 Sechium edule HOM05D006525 ORTHO05D007845 2.5e-63 246.1 202 55.9
CsaV3_5G002090 Cucumis sativus L. HOM05D006525 ORTHO05D007845 3.2e-63 245.7 202 56.9
arahy.Tifrunner.gnm1.ann1.56CREW Arachis hypogaea HOM05D006525 ORTHO05D007845 7.1e-63 244.6 217 57.1
Eucgr.D01725 Eucalyptus grandis HOM05D006525 ORTHO05D007845 9.3e-63 244.2 200 59.5
ClCG01G001950 Citrullus lanatus HOM05D006525 ORTHO05D007845 2.1e-62 243.0 202 55.4
unitig_88.g27636 Utricularia gibba HOM05D006525 ORTHO05D007845 6.0e-62 241.5 213 56.3
MBI07_g34229_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 5.1e-61 238.4 204 55.4
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 6.7e-61 238.0 203 55.2
Oeu009950.2 Olea europaea HOM05D006525 ORTHO05D007845 6.7e-61 238.0 236 53.0
ECA246G0134 Erigeron canadensis HOM05D006525 ORTHO05D007845 5.7e-60 235.0 208 53.8
HanXRQChr17g0535171 Helianthus annuus HOM05D006525 ORTHO05D007845 1.6e-59 233.4 200 55.0
SGA_v2.0_scaffold96G28973 Striga asiatica HOM05D006525 ORTHO05D007845 8.2e-59 231.1 292 44.9
AUR62010826 Chenopodium quinoa HOM05D006525 ORTHO05D007845 2.4e-58 229.6 211 56.4
TAR636G1454 Trochodendron aralioides HOM05D006525 ORTHO05D007845 5.0e-56 221.9 180 58.9
Lsat_1_v5_gn_3_10281 Lactuca sativa HOM05D006525 ORTHO05D007845 1.4e-55 220.3 212 52.4
Thhalv10028271m.g Eutrema salsugineum HOM05D006525 ORTHO05D007845 1.2e-54 217.2 201 51.7
CBR_g29721 Chara braunii HOM05D006525 ORTHO05D007845 2.1e-54 216.5 201 49.8
MBI07_g34230_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 4.6e-54 215.3 181 55.8
HanXRQChr06g0166551 Helianthus annuus HOM05D006525 ORTHO05D007845 1.9e-52 209.9 199 53.3
Lsat_1_v5_gn_6_84361 Lactuca sativa HOM05D006525 ORTHO05D007845 1.9e-52 209.9 183 55.7
Nitab4.5_0000223g0360 Nicotiana tabacum HOM05D006525 ORTHO05D007845 5.7e-52 208.4 181 55.8
Nitab4.5_0010144g0010 Nicotiana tabacum HOM05D006525 ORTHO05D007845 3.7e-51 205.7 176 56.2
Pp3c22_1320 Physcomitrium patens HOM05D006525 ORTHO05D007845 1.2e-49 200.7 139 65.5
TPR.G3436 Trifolium pratense HOM05D006525 ORTHO05D007845 7.7e-49 198.0 147 63.3
Nn3g19049 Nelumbo nucifera HOM05D006525 ORTHO05D007845 3.8e-48 195.7 160 58.1
Lj2A170G33 Lonicera japonica HOM05D006525 ORTHO05D007845 6.1e-46 188.3 155 60.6
FvH4_5g04410 Fragaria vesca HOM05D006525 ORTHO05D007845 1.4e-42 177.2 123 69.1
CSS0025848 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 9.1e-42 174.5 111 73.0
MBI07_g27263_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 5.7e-36 155.2 181 45.9
Sc22g0005060 Simmondsia chinensis HOM05D006525 ORTHO05D007845 2.8e-35 152.9 109 64.2
Hma1.2p1_0359F.1_g135300 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 2.9e-32 142.9 87 72.4
Solyc08g082150.2 Solanum lycopersicum HOM05D006525 ORTHO05D007845 2.5e-31 139.8 99 61.6
SEGI_26681 Sequoiadendron giganteum HOM05D006525 ORTHO05D007845 9.7e-28 127.9 92 64.1
Hma1.2p1_0359F.1_g135320 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 4.8e-27 125.6 113 55.8
Peaxi162Scf00074g01026 Petunia axillaris HOM05D006525 ORTHO05D007845 1.2e-25 120.9 91 63.7
Glyma.05G216200 Glycine max HOM05D006525 ORTHO05D007845 2.7e-25 119.8 102 55.9
Pp3c22_17300 Physcomitrium patens HOM05D006525 ORTHO05D007845 8.5e-24 114.8 84 63.1
BcaNung06853 Brassica carinata HOM05D006525 ORTHO05D007845 1.6e-22 110.5 75 66.7
ATR0589G090 Amborella trichopoda HOM05D006525 ORTHO05D007845 5.2e-21 105.5 91 51.6
MD06G1104600 Malus domestica HOM05D006525 ORTHO05D007845 9.8e-20 101.3 70 64.3
CSS0015265 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 2.2e-19 100.1 102 50.0
AagrBONN_evm.TU.Sc2ySwM_368.643 Anthoceros agrestis HOM05D006525 ORTHO05D007845 7.7e-17 91.7 80 57.5
TPR.G20444 Trifolium pratense HOM05D006525 ORTHO05D007845 7.7e-17 91.7 84 53.6
HanXRQChr03g0061741 Helianthus annuus HOM05D006525 ORTHO05D007845 6.8e-13 78.6 66 54.5
MD06G1104500 Malus domestica HOM05D006525 ORTHO05D007845 2.0e-12 77.0 116 39.7
Sc22g0005070 Simmondsia chinensis HOM05D006525 ORTHO05D007845 2.7e-09 66.6 67 49.3
PGSC0003DMG400026824 Solanum tuberosum HOM05D006525 ORTHO05D007845 2.8e-06 56.6 68 44.1


User provided reference genes

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