Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO288G0011 Selaginella moellendorffii HOM05D004123 ORTHO05D004768 1.4e-72 276.6 187 100.0
SMO266G0088 Selaginella moellendorffii HOM05D004123 ORTHO05D004768 5.7e-37 158.3 124 99.2
MD16G1042200 Malus domestica HOM05D004123 ORTHO05D004768 3.2e-11 72.8 47 74.5
Phvul.003G031000 Phaseolus vulgaris HOM05D004123 ORTHO05D004768 3.2e-11 72.8 50 70.0
HanXRQChr08g0213911 Helianthus annuus HOM05D004123 ORTHO05D004768 5.4e-11 72.0 47 72.3
HPP92_004806 Vanilla planifolia HOM05D004123 ORTHO05D004768 5.4e-11 72.0 57 61.4
HPP92_004807 Vanilla planifolia HOM05D004123 ORTHO05D004768 5.4e-11 72.0 57 61.4
Ah.03g137600 Amaranthus hybridus HOM05D004123 ORTHO05D004768 9.2e-11 71.2 62 58.1
Lj2g0014688 Lotus japonicus HOM05D004123 ORTHO05D004768 9.2e-11 71.2 55 61.8
MD13G1040900 Malus domestica HOM05D004123 ORTHO05D004768 9.2e-11 71.2 47 72.3
Medtr1g110710 Medicago truncatula HOM05D004123 ORTHO05D004768 9.2e-11 71.2 43 76.7
Oeu043592.1 Olea europaea HOM05D004123 ORTHO05D004768 9.2e-11 71.2 52 67.3
PSO063G6205 Papaver somniferum HOM05D004123 ORTHO05D004768 9.2e-11 71.2 60 60.0
PSO782G4509 Papaver somniferum HOM05D004123 ORTHO05D004768 9.2e-11 71.2 60 60.0
Psat6g227440 Pisum sativum HOM05D004123 ORTHO05D004768 9.2e-11 71.2 43 76.7
TPR.G18823 Trifolium pratense HOM05D004123 ORTHO05D004768 9.2e-11 71.2 43 76.7
TPR.G971 Trifolium pratense HOM05D004123 ORTHO05D004768 9.2e-11 71.2 43 76.7
AagrBONN_evm.TU.Sc2ySwM_228.1523 Anthoceros agrestis HOM05D004123 ORTHO05D004768 1.2e-10 70.9 49 67.3
Lalb_Chr21g0308891 Lupinus albus HOM05D004123 ORTHO05D004768 1.2e-10 70.9 43 76.7
Pp3c20_10790 Physcomitrium patens HOM05D004123 ORTHO05D004768 1.2e-10 70.9 39 82.1
SalBow8G0349 Salvia bowleyana HOM05D004123 ORTHO05D004768 1.2e-10 70.9 63 63.5
Thhalv10009343m.g Eutrema salsugineum HOM05D004123 ORTHO05D004768 1.6e-10 70.5 62 56.5
Lalb_Chr10g0100051 Lupinus albus HOM05D004123 ORTHO05D004768 1.6e-10 70.5 56 62.5
SHI16201 Sapria himalayana HOM05D004123 ORTHO05D004768 1.6e-10 70.5 46 73.9
Actinidia14896 Actinidia chinensis HOM05D004123 ORTHO05D004768 3.5e-10 69.3 45 73.3
DCAR_026735 Daucus carota HOM05D004123 ORTHO05D004768 3.5e-10 69.3 106 43.4
unitig_747.g21201 Utricularia gibba HOM05D004123 ORTHO05D004768 3.5e-10 69.3 49 69.4
MELO3C003021.2 Cucumis melo HOM05D004123 ORTHO05D004768 4.6e-10 68.9 47 70.2
CsaV3_5G023110 Cucumis sativus L. HOM05D004123 ORTHO05D004768 4.6e-10 68.9 47 70.2
Migut.E00347 Erythranthe guttata HOM05D004123 ORTHO05D004768 4.6e-10 68.9 97 44.3
FvH4_4g27300 Fragaria vesca HOM05D004123 ORTHO05D004768 4.6e-10 68.9 47 70.2
HanXRQChr09g0252701 Helianthus annuus HOM05D004123 ORTHO05D004768 4.6e-10 68.9 47 70.2
Lsat_1_v5_gn_8_40481 Lactuca sativa HOM05D004123 ORTHO05D004768 4.6e-10 68.9 47 70.2
Rhsim09G0107600 Rhododendron simsii HOM05D004123 ORTHO05D004768 4.6e-10 68.9 47 70.2
vmacro10561 Vaccinium macrocarpon HOM05D004123 ORTHO05D004768 4.6e-10 68.9 47 70.2
AT1G13400 Arabidopsis thaliana HOM05D004123 ORTHO05D004768 6.0e-10 68.6 62 56.5
Lj6C757T7 Lonicera japonica HOM05D004123 ORTHO05D004768 6.0e-10 68.6 101 43.6
Sc04g0006360 Simmondsia chinensis HOM05D004123 ORTHO05D004768 6.0e-10 68.6 45 73.3
TWI31G0276 Tripterygium wilfordii HOM05D004123 ORTHO05D004768 6.0e-10 68.6 50 66.0
unitig_22.g6557 Utricularia gibba HOM05D004123 ORTHO05D004768 6.0e-10 68.6 47 70.2
unitig_8.g3254 Utricularia gibba HOM05D004123 ORTHO05D004768 6.0e-10 68.6 46 71.7
Aa31LG1G1560 Aethionema arabicum HOM05D004123 ORTHO05D004768 7.8e-10 68.2 65 56.9
AL2G27340 Arabidopsis lyrata HOM05D004123 ORTHO05D004768 7.8e-10 68.2 54 63.0
AT1G68480 Arabidopsis thaliana HOM05D004123 ORTHO05D004768 7.8e-10 68.2 54 63.0
CANSAT01G1980 Cannabis sativa HOM05D004123 ORTHO05D004768 7.8e-10 68.2 43 74.4
Carub.0002s1499 Capsella rubella HOM05D004123 ORTHO05D004768 7.8e-10 68.2 54 63.0
CARHR013770 Cardamine hirsuta HOM05D004123 ORTHO05D004768 7.8e-10 68.2 45 71.1
CARHR061260 Cardamine hirsuta HOM05D004123 ORTHO05D004768 7.8e-10 68.2 54 63.0
Cpa.g.sc350.1 Carica papaya HOM05D004123 ORTHO05D004768 7.8e-10 68.2 43 74.4
Duzib248G0829 Durio zibethinus HOM05D004123 ORTHO05D004768 7.8e-10 68.2 56 58.9
Duzib251G0145 Durio zibethinus HOM05D004123 ORTHO05D004768 7.8e-10 68.2 43 74.4
Thhalv10019033m.g Eutrema salsugineum HOM05D004123 ORTHO05D004768 7.8e-10 68.2 54 63.0
Glyma.10G273800 Glycine max HOM05D004123 ORTHO05D004768 7.8e-10 68.2 43 74.4
Gohir.A03G147300 Gossypium hirsutum HOM05D004123 ORTHO05D004768 7.8e-10 68.2 43 74.4
Gohir.A04G098200 Gossypium hirsutum HOM05D004123 ORTHO05D004768 7.8e-10 68.2 43 74.4
Gohir.D02G170500 Gossypium hirsutum HOM05D004123 ORTHO05D004768 7.8e-10 68.2 43 74.4
Gohir.D04G137875 Gossypium hirsutum HOM05D004123 ORTHO05D004768 7.8e-10 68.2 43 74.4
Gorai.005G191500 Gossypium raimondii HOM05D004123 ORTHO05D004768 7.8e-10 68.2 43 74.4
Gorai.012G122600 Gossypium raimondii HOM05D004123 ORTHO05D004768 7.8e-10 68.2 43 74.4
Manes.06G067400 Manihot esculenta HOM05D004123 ORTHO05D004768 7.8e-10 68.2 43 74.4
Phvul.007G027700 Phaseolus vulgaris HOM05D004123 ORTHO05D004768 7.8e-10 68.2 43 74.4
Potri.008G121200 Populus trichocarpa HOM05D004123 ORTHO05D004768 7.8e-10 68.2 43 74.4
Sp5g23550 Schrenkiella parvula HOM05D004123 ORTHO05D004768 7.8e-10 68.2 54 63.0
Sed0004295 Sechium edule HOM05D004123 ORTHO05D004768 7.8e-10 68.2 43 74.4
Solyc05g009380.4 Solanum lycopersicum HOM05D004123 ORTHO05D004768 7.8e-10 68.2 43 74.4
THA.LOC104805254 Tarenaya hassleriana HOM05D004123 ORTHO05D004768 7.8e-10 68.2 62 56.5
Thecc.02G229500 Theobroma cacao HOM05D004123 ORTHO05D004768 7.8e-10 68.2 43 74.4
TWI75G1885 Tripterygium wilfordii HOM05D004123 ORTHO05D004768 7.8e-10 68.2 50 66.0
Aqoxy3G00286 Aquilegia oxysepala HOM05D004123 ORTHO05D004768 1.0e-09 67.8 78 48.7
CiPaw.15G085900 Carya illinoinensis HOM05D004123 ORTHO05D004768 1.0e-09 67.8 43 74.4
CiPaw.16G065300 Carya illinoinensis HOM05D004123 ORTHO05D004768 1.0e-09 67.8 43 74.4
Lsat_1_v5_gn_3_59041 Lactuca sativa HOM05D004123 ORTHO05D004768 1.0e-09 67.8 47 70.2
Lsat_1_v5_gn_8_41281 Lactuca sativa HOM05D004123 ORTHO05D004768 1.0e-09 67.8 46 69.6
Pp3c23_800 Physcomitrium patens HOM05D059517 ORTHO05D004768 1.0e-09 67.8 98 46.9
Pp3c3_21050 Physcomitrium patens HOM05D004123 ORTHO05D004768 1.0e-09 67.8 52 61.5
Prupe.1G311900 Prunus persica HOM05D004123 ORTHO05D004768 1.0e-09 67.8 43 74.4
QL01p041642 Quercus lobata HOM05D004123 ORTHO05D004768 1.0e-09 67.8 43 74.4
Sed0009095 Sechium edule HOM05D004123 ORTHO05D004768 1.0e-09 67.8 47 68.1
AL1G25160 Arabidopsis lyrata HOM05D004123 ORTHO05D004768 1.3e-09 67.4 50 64.0
MSTRG.13535 Avicennia marina HOM05D004123 ORTHO05D004768 1.3e-09 67.4 47 68.1
Carub.0001s1311 Capsella rubella HOM05D004123 ORTHO05D004768 1.3e-09 67.4 50 64.0
Eucgr.G02316 Eucalyptus grandis HOM05D004123 ORTHO05D004768 1.3e-09 67.4 64 56.2
Duzib268G1624 Durio zibethinus HOM05D004123 ORTHO05D004768 1.7e-09 67.0 43 72.1
Glyma.20G116200 Glycine max HOM05D004123 ORTHO05D004768 1.7e-09 67.0 43 74.4
Sp1g11890 Schrenkiella parvula HOM05D004123 ORTHO05D004768 1.7e-09 67.0 62 54.8
MSTRG.844 Avicennia marina HOM05D004123 ORTHO05D004768 2.3e-09 66.6 61 57.4
CAN.G610.78 Capsicum annuum HOM05D004123 ORTHO05D004768 2.3e-09 66.6 56 58.9
Ciclev10018307m.g Citrus clementina HOM05D004123 ORTHO05D004768 2.3e-09 66.6 43 72.1
Manes.14G103000 Manihot esculenta HOM05D004123 ORTHO05D004768 2.3e-09 66.6 65 53.8
Nn3g17856 Nelumbo nucifera HOM05D004123 ORTHO05D004768 2.3e-09 66.6 43 72.1
Nn4g23857 Nelumbo nucifera HOM05D004123 ORTHO05D004768 2.3e-09 66.6 43 72.1
Os01g0129200 Oryza sativa ssp. japonica HOM05D004123 ORTHO05D004768 2.3e-09 66.6 54 61.1
THA.LOC104821930 Tarenaya hassleriana HOM05D004123 ORTHO05D004768 2.3e-09 66.6 46 69.6
TAR374G0469 Trochodendron aralioides HOM05D004123 ORTHO05D004768 2.3e-09 66.6 43 72.1
TAR629G2125 Trochodendron aralioides HOM05D004946 ORTHO05D006101 2.3e-09 66.6 43 72.1
ATR1125G037 Amborella trichopoda HOM05D004123 ORTHO05D004768 3.0e-09 66.2 43 72.1
CDE12G0443 Ceratophyllum demersum HOM05D004123 ORTHO05D004768 3.0e-09 66.2 39 79.5
Zm00001eb335100 Zea mays HOM05D004123 ORTHO05D004768 3.0e-09 66.2 44 70.5
Oeu034240.1 Olea europaea HOM05D004123 ORTHO05D004768 5.1e-09 65.5 52 61.5
PGR119G1213 Punica granatum HOM05D004123 ORTHO05D004768 5.1e-09 65.5 52 59.6
Cc11_g10070 Coffea canephora HOM05D004123 ORTHO05D004768 6.6e-09 65.1 47 66.0
Pp3c23_960 Physcomitrium patens HOM05D004123 ORTHO05D004768 6.6e-09 65.1 49 63.3
A02p15050 Brassica napus HOM05D004123 ORTHO05D004768 8.6e-09 64.7 54 61.1
BcaC08g46276 Brassica carinata HOM05D004123 ORTHO05D004768 1.1e-08 64.3 54 59.3
C06p41480 Brassica napus HOM05D004123 ORTHO05D004768 1.1e-08 64.3 54 59.3
BolC6t39275H Brassica oleracea HOM05D004123 ORTHO05D004768 1.1e-08 64.3 54 59.3
Pp3c23_2190 Physcomitrium patens HOM05D004123 ORTHO05D004768 1.5e-08 63.9 46 65.2
C02p24750 Brassica napus HOM05D004123 ORTHO05D004768 1.9e-08 63.5 47 66.0
BolC2t08567H Brassica oleracea HOM05D004123 ORTHO05D004768 1.9e-08 63.5 47 66.0
Lj5g0020149 Lotus japonicus HOM05D004123 ORTHO05D004768 1.9e-08 63.5 45 71.1
BcaB03g15826 Brassica carinata HOM05D004123 ORTHO05D004768 2.5e-08 63.2 54 59.3
BcaB05g24386 Brassica carinata HOM05D004123 ORTHO05D004768 2.5e-08 63.2 54 59.3
A07p34880 Brassica napus HOM05D004123 ORTHO05D004768 2.5e-08 63.2 54 59.3
GSVIVG01011890001 Vitis vinifera HOM05D004123 ORTHO05D004768 5.6e-08 62.0 43 65.1
SEGI_27536 Sequoiadendron giganteum HOM05D004123 ORTHO05D000239 9.6e-08 61.2 34 76.5
A08p32310 Brassica napus HOM05D004123 ORTHO05D004768 3.6e-07 59.3 51 58.8
BraA08t35155Z Brassica rapa HOM05D004123 ORTHO05D004768 3.6e-07 59.3 51 58.8
Haze_17490 Corylus avellana HOM05D004123 ORTHO05D004768 4.7e-07 58.9 55 58.2
Lj5g0023256 Lotus japonicus HOM05D004123 ORTHO05D004768 4.7e-07 58.9 47 61.7
C08p16160 Brassica napus HOM05D004123 ORTHO05D004768 1.1e-06 57.8 68 48.5
VMungo1215G3079 Vigna mungo HOM05D004123 ORTHO05D004768 1.8e-06 57.0 50 58.0
BcaC05g25048 Brassica carinata HOM05D004123 ORTHO05D004768 3.1e-06 56.2 69 47.8
BcaB03g13142 Brassica carinata HOM05D004123 ORTHO05D004768 5.2e-06 55.5 62 50.0
TAR622G0492 Trochodendron aralioides HOM05D004123 ORTHO05D004768 5.2e-06 55.5 57 52.6
BolC8t49237H Brassica oleracea HOM05D004123 ORTHO05D004768 6.8e-06 55.1 71 46.5


User provided reference genes

Program Settings