Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO286G0021 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.3e-96 356.3 169 100.0
SMO117G0311 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 5.7e-52 208.0 253 51.4
SMO364G0054 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 2.5e-47 192.6 164 65.2
SMO286G0020 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 2.3e-45 186.0 159 66.0
SMO274G0004 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.2e-41 173.7 205 52.7
SMO240G0047 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.0e-40 170.6 147 65.3
SMO122G0009 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 4.2e-39 165.2 145 60.7
SMO183G0003 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 6.3e-35 151.4 131 61.8
SMO077G0009 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 8.3e-35 151.0 161 53.4
SMO274G0026 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 5.4e-34 148.3 136 63.2
SMO274G0001 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 5.6e-31 138.3 85 71.8
SMO009G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.0e-29 134.0 135 58.5
SMO274G0023 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 4.4e-28 128.6 152 51.3
SMO077G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 4.3e-23 112.1 94 63.8
SMO212G0008 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 7.8e-17 91.3 82 57.3
MBI02_g20482_MAGBIO Magnolia biondii HOM05D004701 ORTHO05D005220 1.5e-15 87.0 174 32.2
vmacro17562 Vaccinium macrocarpon HOM05D004701 ORTHO05D005220 1.2e-14 84.0 171 28.7
CDE02G4120 Ceratophyllum demersum HOM05D004701 ORTHO05D005220 6.2e-14 81.6 173 28.9
PGR083G0417 Punica granatum HOM05D004701 ORTHO05D005220 6.2e-14 81.6 164 31.7
Mapoly0021s0150 Marchantia polymorpha HOM05D004701 ORTHO05D005220 8.1e-14 81.3 171 29.2
PSO832G0806 Papaver somniferum HOM05D004701 ORTHO05D005220 8.1e-14 81.3 174 29.3
Nn4g23237 Nelumbo nucifera HOM05D004701 ORTHO05D005220 1.1e-13 80.9 173 30.6
Aqoxy3G03462 Aquilegia oxysepala HOM05D004701 ORTHO05D005220 1.8e-13 80.1 164 29.3
CsaV3_1G002500 Cucumis sativus L. HOM05D004701 ORTHO05D005220 1.8e-13 80.1 168 31.0
AagrBONN_evm.TU.Sc2ySwM_344.3797 Anthoceros agrestis HOM05D004701 ORTHO05D005220 2.3e-13 79.7 173 30.6
Rhsim08G0152800 Rhododendron simsii HOM05D004701 ORTHO05D005220 2.3e-13 79.7 171 28.1
COL.COLO4_36922 Corchorus olitorius HOM05D004701 ORTHO05D005220 3.1e-13 79.3 170 29.4
FAN13G1597 Fragaria x ananassa HOM05D004701 ORTHO05D005220 3.1e-13 79.3 170 31.8
Atru.chr9.198 Acer truncatum HOM05D004701 ORTHO05D005220 4.0e-13 79.0 171 28.1
CiPaw.12G011900 Carya illinoinensis HOM05D004701 ORTHO05D005220 4.0e-13 79.0 177 28.8
FAN08G0610 Fragaria x ananassa HOM05D004701 ORTHO05D005220 4.0e-13 79.0 170 31.8
TAR629G0729 Trochodendron aralioides HOM05D004701 ORTHO05D005220 4.0e-13 79.0 171 28.1
TAR629G3124 Trochodendron aralioides HOM05D004701 ORTHO05D005220 4.0e-13 79.0 171 28.1
MELO3C017186.2 Cucumis melo HOM05D004701 ORTHO05D005220 5.2e-13 78.6 167 30.5
THA.LOC104808258 Tarenaya hassleriana HOM05D004701 ORTHO05D005220 5.2e-13 78.6 172 28.5
Gorai.003G098100 Gossypium raimondii HOM05D004701 ORTHO05D005220 6.8e-13 78.2 170 28.8
Thecc.03G092900 Theobroma cacao HOM05D004701 ORTHO05D005220 6.8e-13 78.2 170 28.8
Gohir.A03G067500 Gossypium hirsutum HOM05D004701 ORTHO05D005220 1.2e-12 77.4 170 28.8
Nitab4.5_0001211g0300 Nicotiana tabacum HOM05D004701 ORTHO05D005220 1.2e-12 77.4 170 31.2
SalBow5G2872 Salvia bowleyana HOM05D004701 ORTHO05D005220 1.2e-12 77.4 170 30.6
Eucgr.B00530 Eucalyptus grandis HOM05D004701 ORTHO05D005220 1.5e-12 77.0 172 30.8
FvH4_5g14650 Fragaria vesca HOM05D004701 ORTHO05D005220 1.5e-12 77.0 170 30.6
FAN18G0140 Fragaria x ananassa HOM05D004701 ORTHO05D005220 1.5e-12 77.0 170 30.6
Sed0001989 Sechium edule HOM05D004701 ORTHO05D005220 1.5e-12 77.0 165 30.9
GSVIVG01007980001 Vitis vinifera HOM05D004701 ORTHO05D005220 1.5e-12 77.0 172 31.4
CANSAT80G1745 Cannabis sativa HOM05D004701 ORTHO05D005220 2.0e-12 76.6 169 30.8
Cc00_g08370 Coffea canephora HOM05D004701 ORTHO05D005220 2.0e-12 76.6 174 29.9
Duzib068G0813 Durio zibethinus HOM05D004701 ORTHO05D005220 2.0e-12 76.6 169 30.2
RcHm_v2.0_Chr7g0181841 Rosa chinensis HOM05D004701 ORTHO05D005220 2.6e-12 76.3 169 30.8
Duzib205G0738 Durio zibethinus HOM05D004701 ORTHO05D005220 4.4e-12 75.5 170 27.6
Manes.14G080700 Manihot esculenta HOM05D004701 ORTHO05D005220 4.4e-12 75.5 168 29.8
Prupe.5G196200 Prunus persica HOM05D004701 ORTHO05D005220 4.4e-12 75.5 171 29.8
Sabra17G0093000 Salix brachista HOM05D004701 ORTHO05D005220 4.4e-12 75.5 173 28.9
Sopen03g034820 Solanum pennellii HOM05D004701 ORTHO05D005220 4.4e-12 75.5 170 32.4
Dinv38737 Davidia involucrata HOM05D004701 ORTHO05D005220 5.8e-12 75.1 163 28.8
Aa31LG7G3460 Aethionema arabicum HOM05D004701 ORTHO05D005220 9.9e-12 74.3 180 28.3
Ciclev10019092m.g Citrus clementina HOM05D004701 ORTHO05D005220 9.9e-12 74.3 170 27.6
Gohir.D03G094000 Gossypium hirsutum HOM05D004701 ORTHO05D005220 9.9e-12 74.3 171 29.2
Lsat_1_v5_gn_5_21460 Lactuca sativa HOM05D004701 ORTHO05D005220 9.9e-12 74.3 165 27.3
Nitab4.5_0005900g0110 Nicotiana tabacum HOM05D004701 ORTHO05D005220 9.9e-12 74.3 170 31.2
TWI81G0545 Tripterygium wilfordii HOM05D004701 ORTHO05D005220 1.3e-11 73.9 171 30.4
Solyc03g115840.4 Solanum lycopersicum HOM05D004701 ORTHO05D005220 1.7e-11 73.6 170 31.8
Peaxi162Scf00274g00452 Petunia axillaris HOM05D004701 ORTHO05D005220 2.2e-11 73.2 172 30.8
HanXRQChr05g0154901 Helianthus annuus HOM05D004701 ORTHO05D005220 2.9e-11 72.8 170 27.6
Potri.017G112200 Populus trichocarpa HOM05D004701 ORTHO05D005220 2.9e-11 72.8 170 29.4
CAN.G479.72 Capsicum annuum HOM05D004701 ORTHO05D005220 3.7e-11 72.4 171 31.6
Migut.I00201 Erythranthe guttata HOM05D004701 ORTHO05D005220 4.9e-11 72.0 173 28.9
A09p59760 Brassica napus HOM05D004701 ORTHO05D005220 8.3e-11 71.2 170 30.0
BraA09t41353Z Brassica rapa HOM05D004701 ORTHO05D005220 8.3e-11 71.2 170 30.0
ATR0564G073 Amborella trichopoda HOM05D004701 ORTHO05D005220 1.4e-10 70.5 176 30.1
Hund02633 Selenicereus undatus HOM05D004701 ORTHO05D005220 1.9e-10 70.1 168 27.4
AL1G31150 Arabidopsis lyrata HOM05D004701 ORTHO05D005220 2.4e-10 69.7 173 30.1
AT1G18700 Arabidopsis thaliana HOM05D004701 ORTHO05D005220 2.4e-10 69.7 173 28.3
BcaC07g41307 Brassica carinata HOM05D004701 ORTHO05D005220 4.1e-10 68.9 173 28.3
C08p43140 Brassica napus HOM05D004701 ORTHO05D005220 4.1e-10 68.9 173 28.9
BolC8t51869H Brassica oleracea HOM05D004701 ORTHO05D005220 4.1e-10 68.9 173 28.9
Glyma.06G195700 Glycine max HOM05D004701 ORTHO05D005220 4.1e-10 68.9 174 26.4
MD06G1196700 Malus domestica HOM05D004701 ORTHO05D005220 4.1e-10 68.9 170 27.1
Sp1g16680 Schrenkiella parvula HOM05D004701 ORTHO05D005220 4.1e-10 68.9 174 27.6
SEGI_05265 Sequoiadendron giganteum HOM05D004701 ORTHO05D005220 4.1e-10 68.9 169 30.8
Cfa018922 Carpinus fangiana HOM05D004701 ORTHO05D005220 5.4e-10 68.6 175 27.4
Os07g0632600 Oryza sativa ssp. japonica HOM05D004701 ORTHO05D005220 5.4e-10 68.6 174 29.9
Carub.0001s1833 Capsella rubella HOM05D004701 ORTHO05D005220 7.1e-10 68.2 173 28.3
CSS0010493 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 9.2e-10 67.8 166 27.1
PSO063G2323 Papaver somniferum HOM05D004701 ORTHO05D005220 9.2e-10 67.8 139 28.8
Haze_07305 Corylus avellana HOM05D004701 ORTHO05D005220 1.2e-09 67.4 175 27.4
Thhalv10006967m.g Eutrema salsugineum HOM05D004701 ORTHO05D005220 1.2e-09 67.4 173 27.7
Lj5A108G55 Lonicera japonica HOM05D004701 ORTHO05D005220 1.2e-09 67.4 169 26.0
BcaB03g14489 Brassica carinata HOM05D004701 ORTHO05D005220 1.6e-09 67.0 174 28.2
arahy.Tifrunner.gnm1.ann1.00I77L Arachis hypogaea HOM05D004701 ORTHO05D005220 2.1e-09 66.6 175 29.7
arahy.Tifrunner.gnm1.ann1.UQ68S4 Arachis hypogaea HOM05D004701 ORTHO05D005220 2.7e-09 66.2 175 29.1
Phvul.009G185900 Phaseolus vulgaris HOM05D004701 ORTHO05D005220 2.7e-09 66.2 173 27.2
Zm00001eb110080 Zea mays HOM05D004701 ORTHO05D005220 2.7e-09 66.2 171 28.7
Ah.11g048260 Amaranthus hybridus HOM05D004701 ORTHO05D005220 7.8e-09 64.7 161 26.1
EL10Ac5g11047 Beta vulgaris HOM05D004701 ORTHO05D005220 7.8e-09 64.7 170 25.3
VMungo1309G2345 Vigna mungo HOM05D004701 ORTHO05D005220 1.3e-08 63.9 173 26.0
Pp3c17_15290 Physcomitrium patens HOM05D004701 ORTHO05D005220 1.7e-08 63.5 178 27.5
ECA246G0122 Erigeron canadensis HOM05D004701 ORTHO05D005220 2.3e-08 63.2 173 25.4
TPR.G11816 Trifolium pratense HOM05D004701 ORTHO05D005220 3.0e-08 62.8 172 26.7
QL10p017494 Quercus lobata HOM05D004701 ORTHO05D005220 3.9e-08 62.4 175 26.9
Lj1g0024661 Lotus japonicus HOM05D004701 ORTHO05D005220 5.1e-08 62.0 91 35.2
Sc12g0006470 Simmondsia chinensis HOM05D004701 ORTHO05D005220 5.1e-08 62.0 170 28.8
Lalb_Chr08g0235571 Lupinus albus HOM05D004701 ORTHO05D005220 1.1e-07 60.8 171 24.0
MD14G1203500 Malus domestica HOM05D004701 ORTHO05D005220 1.1e-07 60.8 166 27.7
AUR62021651 Chenopodium quinoa HOM05D004701 ORTHO05D005220 1.5e-07 60.5 168 26.2
Medtr3g435140 Medicago truncatula HOM05D004701 ORTHO05D005220 2.5e-07 59.7 178 27.0
AUR62008439 Chenopodium quinoa HOM05D004701 ORTHO05D005220 3.3e-07 59.3 167 25.1
CSS0005828 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 4.3e-07 58.9 115 29.6
Lsat_1_v5_gn_3_76880 Lactuca sativa HOM05D005083 ORTHO05D006310 4.3e-07 58.9 90 35.6


User provided reference genes

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