Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO278G0024 Selaginella moellendorffii HOM05D015570 ORTHO05D378247 1.4e-306 1055.4 541 100.0
SMO200G0082 Selaginella moellendorffii HOM05D015570 ORTHO05D378953 4.2e-189 665.2 355 96.9
SMO200G0220 Selaginella moellendorffii HOM05D015570 ORTHO05D376967 1.2e-180 637.1 462 76.6
SMO278G0010 Selaginella moellendorffii HOM05D015570 ORTHO05D376479 4.4e-162 575.5 337 89.9
SMO338G0011 Selaginella moellendorffii HOM05D015570 ORTHO05D379442 5.1e-70 269.6 184 80.4
SMO011G0038 Selaginella moellendorffii HOM05D015570 ORTHO05D000080 1.2e-63 248.4 350 47.4
SMO171G0127 Selaginella moellendorffii HOM05D015570 ORTHO05D377153 9.5e-24 115.9 111 55.0
SMO287G0025 Selaginella moellendorffii HOM05D015570 ORTHO05D000080 5.7e-21 106.7 104 53.8
SMO171G0131 Selaginella moellendorffii HOM05D015570 ORTHO05D379218 1.3e-20 105.5 99 54.5
SMO140G0050 Selaginella moellendorffii HOM05D003484 ORTHO05D004152 3.6e-15 87.4 53 83.0
Nitab4.5_0000286g0050 Nicotiana tabacum HOM05D000136 ORTHO05D000080 1.4e-11 75.5 272 24.6
CsaV3_4G035900 Cucumis sativus L. HOM05D000136 ORTHO05D000080 1.2e-10 72.4 297 26.9
vmacro01411 Vaccinium macrocarpon HOM05D000136 ORTHO05D000080 1.9e-08 65.1 116 32.8
Aqoxy2G01038 Aquilegia oxysepala HOM05D000136 ORTHO05D000080 2.8e-07 61.2 130 33.8
Mapoly0045s0084 Marchantia polymorpha HOM05D000136 ORTHO05D000080 8.0e-07 59.7 117 31.6
MSTRG.14069 Avicennia marina HOM05D000136 ORTHO05D000080 1.1e-06 59.3 106 34.9
CANSAT21G0693 Cannabis sativa HOM05D000136 ORTHO05D000080 1.1e-06 59.3 131 32.1
CiPaw.15G088300 Carya illinoinensis HOM05D000136 ORTHO05D000080 1.1e-06 59.3 132 30.3
Lj7C239T6 Lonicera japonica HOM05D000136 ORTHO05D000080 1.8e-06 58.5 106 34.9
Lj7C245T5 Lonicera japonica HOM05D000136 ORTHO05D000080 1.8e-06 58.5 106 34.9
Rhsim12G0087000 Rhododendron simsii HOM05D000136 ORTHO05D000080 1.8e-06 58.5 106 33.0
SEGI_08352 Sequoiadendron giganteum HOM05D000136 ORTHO05D000080 1.8e-06 58.5 113 30.1
RcHm_v2.0_Chr6g0311451 Rosa chinensis HOM05D000136 ORTHO05D000080 2.3e-06 58.2 106 35.8
GSVIVG01035434001 Vitis vinifera HOM05D000136 ORTHO05D000080 2.3e-06 58.2 129 31.8
CiPaw.15G087800 Carya illinoinensis HOM05D000136 ORTHO05D000080 3.1e-06 57.8 106 34.9
Ciclev10009767m.g Citrus clementina HOM05D000136 ORTHO05D000080 3.1e-06 57.8 115 31.3
ATR0051G009 Amborella trichopoda HOM05D000136 ORTHO05D000080 4.0e-06 57.4 115 30.4
Ciclev10009756m.g Citrus clementina HOM05D000136 ORTHO05D000080 4.0e-06 57.4 106 35.8
SMO140G0011 Selaginella moellendorffii HOM05D003484 ORTHO05D004152 4.0e-06 57.4 33 78.8
BolC3t13125H Brassica oleracea HOM05D000136 ORTHO05D000080 5.2e-06 57.0 108 34.3
TPR.G38923 Trifolium pratense HOM05D000136 ORTHO05D000080 5.2e-06 57.0 108 32.4
unitig_748.g8241 Utricularia gibba HOM05D000136 ORTHO05D000080 5.2e-06 57.0 115 33.0
CiPaw.15G088100 Carya illinoinensis HOM05D000136 ORTHO05D000080 6.8e-06 56.6 139 31.7
CiPaw.15G088400 Carya illinoinensis HOM05D000136 ORTHO05D000080 6.8e-06 56.6 132 30.3
Dinv27031 Davidia involucrata HOM05D000118 ORTHO05D000080 6.8e-06 56.6 127 33.9
FAN20G2334 Fragaria x ananassa HOM05D000136 ORTHO05D000080 6.8e-06 56.6 115 33.0
Hma1.2p1_0196F.1_g084960 Hydrangea macrophylla HOM05D000136 ORTHO05D000080 6.8e-06 56.6 106 34.9
Zm00001eb121900 Zea mays HOM05D000136 ORTHO05D000080 6.8e-06 56.6 106 34.9
Atru.chr7.1909 Acer truncatum HOM05D000136 ORTHO05D000080 8.9e-06 56.2 115 31.3
C03p06180 Brassica napus HOM05D000136 ORTHO05D000080 8.9e-06 56.2 108 34.3
Haze_18138 Corylus avellana HOM05D000136 ORTHO05D000080 8.9e-06 56.2 252 25.4
Duzib187G1562 Durio zibethinus HOM05D000136 ORTHO05D000080 8.9e-06 56.2 116 31.0
Rhsim05G0073400 Rhododendron simsii HOM05D000136 ORTHO05D000080 8.9e-06 56.2 106 33.0
SMO338G0002 Selaginella moellendorffii HOM05D003484 ORTHO05D004152 8.9e-06 56.2 36 72.2


User provided reference genes

Program Settings