Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO274G0004 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 4.0e-153 544.7 265 100.0
SMO240G0047 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 4.0e-100 368.6 263 73.4
SMO117G0311 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 4.7e-85 318.5 255 65.1
SMO286G0020 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 4.7e-85 318.5 258 67.1
SMO364G0054 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 8.1e-69 264.6 176 73.9
SMO274G0023 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.0e-55 221.1 265 50.9
SMO122G0009 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.5e-54 217.2 260 49.6
SMO183G0003 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.5e-51 207.2 247 50.6
SMO009G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 4.4e-51 205.7 154 70.8
SMO274G0026 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 8.4e-50 201.4 241 49.8
SMO286G0021 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 5.4e-41 172.2 205 52.7
SMO077G0009 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.6e-40 170.6 281 43.1
SMO077G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.4e-36 157.5 261 41.4
Duzib068G0813 Durio zibethinus HOM05D004701 ORTHO05D005220 4.6e-32 142.5 277 32.9
Duzib205G0738 Durio zibethinus HOM05D004701 ORTHO05D005220 6.0e-32 142.1 277 32.5
Mapoly0021s0150 Marchantia polymorpha HOM05D004701 ORTHO05D005220 7.9e-32 141.7 362 27.9
MELO3C017186.2 Cucumis melo HOM05D004701 ORTHO05D005220 1.8e-31 140.6 272 32.4
CsaV3_1G002500 Cucumis sativus L. HOM05D004701 ORTHO05D005220 3.0e-31 139.8 273 31.9
Gorai.003G098100 Gossypium raimondii HOM05D004701 ORTHO05D005220 3.0e-31 139.8 271 32.8
Gohir.A03G067500 Gossypium hirsutum HOM05D004701 ORTHO05D005220 5.1e-31 139.0 270 33.0
Gohir.D03G094000 Gossypium hirsutum HOM05D004701 ORTHO05D005220 1.5e-30 137.5 271 32.1
MBI02_g20482_MAGBIO Magnolia biondii HOM05D004701 ORTHO05D005220 4.3e-30 136.0 266 33.5
CiPaw.12G011900 Carya illinoinensis HOM05D004701 ORTHO05D005220 5.7e-30 135.6 288 33.3
Thecc.03G092900 Theobroma cacao HOM05D004701 ORTHO05D005220 5.7e-30 135.6 271 31.7
PGR083G0417 Punica granatum HOM05D004701 ORTHO05D005220 7.4e-30 135.2 268 33.6
Sed0001989 Sechium edule HOM05D004701 ORTHO05D005220 2.1e-29 133.7 271 31.4
Nn4g23237 Nelumbo nucifera HOM05D004701 ORTHO05D005220 3.7e-29 132.9 273 33.0
TAR629G0729 Trochodendron aralioides HOM05D004701 ORTHO05D005220 1.8e-28 130.6 270 31.9
TAR629G3124 Trochodendron aralioides HOM05D004701 ORTHO05D005220 1.8e-28 130.6 270 31.9
Cfa018922 Carpinus fangiana HOM05D004701 ORTHO05D005220 2.4e-28 130.2 285 31.9
QL10p017494 Quercus lobata HOM05D004701 ORTHO05D005220 3.1e-28 129.8 277 33.9
Atru.chr9.198 Acer truncatum HOM05D004701 ORTHO05D005220 4.0e-28 129.4 270 31.9
Nitab4.5_0001211g0300 Nicotiana tabacum HOM05D004701 ORTHO05D005220 5.3e-28 129.0 262 33.2
Zm00001eb110080 Zea mays HOM05D004701 ORTHO05D005220 5.3e-28 129.0 279 31.2
SMO212G0008 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 6.9e-28 128.6 194 44.3
CANSAT80G1745 Cannabis sativa HOM05D004701 ORTHO05D005220 9.0e-28 128.3 268 32.1
Eucgr.B00530 Eucalyptus grandis HOM05D004701 ORTHO05D005220 9.0e-28 128.3 270 33.0
FAN18G0140 Fragaria x ananassa HOM05D004701 ORTHO05D005220 9.0e-28 128.3 263 33.8
Nitab4.5_0005900g0110 Nicotiana tabacum HOM05D004701 ORTHO05D005220 1.2e-27 127.9 267 32.6
Os07g0632600 Oryza sativa ssp. japonica HOM05D004701 ORTHO05D005220 1.5e-27 127.5 281 31.7
Potri.017G112200 Populus trichocarpa HOM05D004701 ORTHO05D005220 1.5e-27 127.5 272 32.4
PSO832G0806 Papaver somniferum HOM05D004701 ORTHO05D005220 2.0e-27 127.1 273 31.9
Solyc03g115840.4 Solanum lycopersicum HOM05D004701 ORTHO05D005220 4.5e-27 125.9 270 32.2
Peaxi162Scf00274g00452 Petunia axillaris HOM05D004701 ORTHO05D005220 5.8e-27 125.6 268 32.1
CDE02G4120 Ceratophyllum demersum HOM05D004701 ORTHO05D005220 7.6e-27 125.2 271 29.9
Ciclev10019092m.g Citrus clementina HOM05D004701 ORTHO05D005220 7.6e-27 125.2 273 29.3
FvH4_5g14650 Fragaria vesca HOM05D004701 ORTHO05D005220 7.6e-27 125.2 271 32.8
FAN08G0610 Fragaria x ananassa HOM05D004701 ORTHO05D005220 7.6e-27 125.2 271 32.8
SalBow5G2872 Salvia bowleyana HOM05D004701 ORTHO05D005220 1.0e-26 124.8 273 30.8
Aa31LG7G3460 Aethionema arabicum HOM05D004701 ORTHO05D005220 1.3e-26 124.4 277 30.3
CAN.G479.72 Capsicum annuum HOM05D004701 ORTHO05D005220 1.3e-26 124.4 323 30.0
FAN13G1597 Fragaria x ananassa HOM05D004701 ORTHO05D005220 1.7e-26 124.0 267 33.3
AagrBONN_evm.TU.Sc2ySwM_344.3797 Anthoceros agrestis HOM05D004701 ORTHO05D005220 2.2e-26 123.6 274 30.7
Aqoxy3G03462 Aquilegia oxysepala HOM05D004701 ORTHO05D005220 2.2e-26 123.6 265 30.6
Sopen03g034820 Solanum pennellii HOM05D004701 ORTHO05D005220 2.2e-26 123.6 270 31.9
THA.LOC104808258 Tarenaya hassleriana HOM05D004701 ORTHO05D005220 2.2e-26 123.6 284 30.6
Dinv38737 Davidia involucrata HOM05D004701 ORTHO05D005220 2.9e-26 123.2 270 31.1
Ah.11g048260 Amaranthus hybridus HOM05D004701 ORTHO05D005220 6.5e-26 122.1 263 30.0
BraA09t41353Z Brassica rapa HOM05D004701 ORTHO05D005220 6.5e-26 122.1 275 30.2
Manes.14G080700 Manihot esculenta HOM05D004701 ORTHO05D005220 8.4e-26 121.7 267 31.8
RcHm_v2.0_Chr7g0181841 Rosa chinensis HOM05D004701 ORTHO05D005220 1.1e-25 121.3 264 32.6
ATR0564G073 Amborella trichopoda HOM05D004701 ORTHO05D005220 1.4e-25 120.9 285 31.9
Prupe.5G196200 Prunus persica HOM05D004701 ORTHO05D005220 1.4e-25 120.9 272 31.2
A09p59760 Brassica napus HOM05D004701 ORTHO05D005220 1.9e-25 120.6 274 30.3
BolC8t51869H Brassica oleracea HOM05D004701 ORTHO05D005220 5.5e-25 119.0 278 29.9
Migut.I00201 Erythranthe guttata HOM05D004701 ORTHO05D005220 5.5e-25 119.0 274 29.9
TWI81G0545 Tripterygium wilfordii HOM05D004701 ORTHO05D005220 9.3e-25 118.2 271 30.3
Sabra17G0093000 Salix brachista HOM05D004701 ORTHO05D005220 1.2e-24 117.9 272 29.8
SMO202G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.2e-24 117.9 188 44.7
C08p43140 Brassica napus HOM05D004701 ORTHO05D005220 1.6e-24 117.5 277 30.0
Sp1g16680 Schrenkiella parvula HOM05D004701 ORTHO05D005220 1.6e-24 117.5 278 29.9
BcaC07g41307 Brassica carinata HOM05D004701 ORTHO05D005220 2.1e-24 117.1 277 29.6
SEGI_05265 Sequoiadendron giganteum HOM05D004701 ORTHO05D005220 2.1e-24 117.1 155 40.6
SMO274G0001 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 3.5e-24 116.3 224 38.8
Pp3c17_15290 Physcomitrium patens HOM05D004701 ORTHO05D005220 4.6e-24 115.9 280 30.4
GSVIVG01007980001 Vitis vinifera HOM05D004701 ORTHO05D005220 6.1e-24 115.5 270 30.0
Thhalv10006967m.g Eutrema salsugineum HOM05D004701 ORTHO05D005220 7.9e-24 115.2 277 28.9
MD06G1196700 Malus domestica HOM05D004701 ORTHO05D005220 7.9e-24 115.2 271 30.3
AL1G31150 Arabidopsis lyrata HOM05D004701 ORTHO05D005220 2.3e-23 113.6 278 29.5
Hund02633 Selenicereus undatus HOM05D004701 ORTHO05D005220 2.3e-23 113.6 277 30.3
Carub.0001s1833 Capsella rubella HOM05D004701 ORTHO05D005220 3.9e-23 112.8 277 29.2
Cc00_g08370 Coffea canephora HOM05D004701 ORTHO05D005220 6.7e-23 112.1 281 28.5
SMO032G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 8.7e-23 111.7 100 65.0
AT1G18700 Arabidopsis thaliana HOM05D004701 ORTHO05D005220 1.5e-22 110.9 278 28.8
BcaB03g14489 Brassica carinata HOM05D004701 ORTHO05D005220 3.3e-22 109.8 278 29.1
COL.COLO4_36922 Corchorus olitorius HOM05D004701 ORTHO05D005220 3.3e-22 109.8 151 39.1
vmacro17562 Vaccinium macrocarpon HOM05D004701 ORTHO05D005220 3.3e-22 109.8 375 25.6
Lj5A108G55 Lonicera japonica HOM05D004701 ORTHO05D005220 2.8e-21 106.7 279 28.0
Haze_07305 Corylus avellana HOM05D004701 ORTHO05D005220 1.8e-20 104.0 162 37.0
HanXRQChr05g0154901 Helianthus annuus HOM05D004701 ORTHO05D005220 1.8e-20 104.0 269 26.8
Lsat_1_v5_gn_5_21460 Lactuca sativa HOM05D004701 ORTHO05D005220 3.1e-20 103.2 262 27.5
Lj4g0017943 Lotus japonicus HOM05D004701 ORTHO05D005220 3.1e-20 103.2 282 28.0
CSS0010493 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 4.1e-20 102.8 345 25.8
Lj1g0024661 Lotus japonicus HOM05D004701 ORTHO05D005220 6.9e-20 102.1 282 29.1
Glyma.06G195700 Glycine max HOM05D004701 ORTHO05D005220 2.0e-19 100.5 275 27.6
arahy.Tifrunner.gnm1.ann1.00I77L Arachis hypogaea HOM05D004701 ORTHO05D005220 4.5e-19 99.4 278 28.1
ECA246G0122 Erigeron canadensis HOM05D004701 ORTHO05D005220 4.5e-19 99.4 272 27.6
HPP92_019783 Vanilla planifolia HOM05D004701 ORTHO05D005220 7.7e-19 98.6 208 30.3
Sc12g0006470 Simmondsia chinensis HOM05D004701 ORTHO05D005220 1.3e-18 97.8 278 26.6
Lj2g0020469 Lotus japonicus HOM05D004701 ORTHO05D005220 2.2e-18 97.1 279 29.0
MD14G1203500 Malus domestica HOM05D004701 ORTHO05D005220 2.2e-18 97.1 148 38.5
Phvul.009G185900 Phaseolus vulgaris HOM05D004701 ORTHO05D005220 2.9e-18 96.7 275 26.5
VMungo1309G2345 Vigna mungo HOM05D004701 ORTHO05D005220 6.5e-18 95.5 277 26.4
Lalb_Chr08g0235571 Lupinus albus HOM05D004701 ORTHO05D005220 8.5e-18 95.1 278 27.0
EL10Ac5g11047 Beta vulgaris HOM05D004701 ORTHO05D005220 1.1e-17 94.7 258 27.5
Medtr3g435140 Medicago truncatula HOM05D004701 ORTHO05D005220 3.2e-17 93.2 283 26.9
Psat5g195480 Pisum sativum HOM05D004701 ORTHO05D005220 5.5e-17 92.4 282 27.7
TPR.G11816 Trifolium pratense HOM05D004701 ORTHO05D005220 5.5e-17 92.4 282 27.7
CSS0005828 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 1.6e-16 90.9 227 27.8
arahy.Tifrunner.gnm1.ann1.UQ68S4 Arachis hypogaea HOM05D004701 ORTHO05D005220 3.6e-16 89.7 278 27.0
Rhsim08G0152800 Rhododendron simsii HOM05D004701 ORTHO05D005220 4.6e-16 89.4 152 30.9
AUR62008439 Chenopodium quinoa HOM05D004701 ORTHO05D005220 2.0e-14 84.0 261 25.3
AUR62021651 Chenopodium quinoa HOM05D004701 ORTHO05D005220 2.5e-14 83.6 268 25.0
PSO063G2323 Papaver somniferum HOM05D004701 ORTHO05D005220 4.3e-14 82.8 266 25.9
DCAR_010367 Daucus carota HOM05D004701 ORTHO05D005220 5.7e-14 82.4 211 29.4
HPP92_019730 Vanilla planifolia HOM05D004701 ORTHO05D005220 7.7e-11 72.0 104 37.5
Cpa.g.sc341.2 Carica papaya HOM05D004701 ORTHO05D005220 1.7e-10 70.9 104 35.6
Actinidia04875 Actinidia chinensis HOM05D004701 ORTHO05D005220 1.4e-09 67.8 129 33.3
PGSC0003DMG400019522 Solanum tuberosum HOM05D004701 ORTHO05D005220 5.5e-09 65.9 112 34.8


User provided reference genes

Program Settings