Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO271G0179 Selaginella moellendorffii HOM05D003948 ORTHO05D004610 3.6e-143 511.5 251 100.0
ATR1156G038 Amborella trichopoda HOM05D003948 ORTHO05D004610 7.7e-45 184.9 252 39.7
SEGI_16675 Sequoiadendron giganteum HOM05D003948 ORTHO05D004610 6.5e-44 181.8 248 37.9
Manes.11G053200 Manihot esculenta HOM05D003948 ORTHO05D004610 8.5e-44 181.4 263 39.2
TAR625G1371 Trochodendron aralioides HOM05D003948 ORTHO05D004610 8.5e-44 181.4 271 38.0
MELO3C017899.2 Cucumis melo HOM05D003948 ORTHO05D004610 1.9e-43 180.3 256 38.7
Nn8g39388 Nelumbo nucifera HOM05D003948 ORTHO05D004610 1.9e-43 180.3 267 38.2
CsaV3_4G001410 Cucumis sativus L. HOM05D003948 ORTHO05D004610 2.5e-43 179.9 256 38.7
ClCG07G012790 Citrullus lanatus HOM05D003948 ORTHO05D004610 5.5e-43 178.7 255 39.2
Sed0014623 Sechium edule HOM05D003948 ORTHO05D004610 5.5e-43 178.7 256 38.7
Rhsim08G0216000 Rhododendron simsii HOM05D003948 ORTHO05D004610 1.2e-42 177.6 246 39.4
CSS0012666 Camellia sinensis var. sinensis HOM05D003948 ORTHO05D004610 2.1e-42 176.8 253 40.7
CiPaw.03G241800 Carya illinoinensis HOM05D003948 ORTHO05D004610 2.1e-42 176.8 253 37.9
Eucgr.J03052 Eucalyptus grandis HOM05D003948 ORTHO05D004610 2.1e-42 176.8 259 39.8
Gorai.011G081300 Gossypium raimondii HOM05D003948 ORTHO05D004610 6.1e-42 175.3 266 37.6
Manes.14G130600 Manihot esculenta HOM05D003948 ORTHO05D004610 6.1e-42 175.3 249 40.2
Lsat_1_v5_gn_4_105880 Lactuca sativa HOM05D003948 ORTHO05D004610 1.0e-41 174.5 234 41.9
Actinidia22003 Actinidia chinensis HOM05D003948 ORTHO05D004610 1.8e-41 173.7 268 37.7
Ca_01082_v3 Cicer arietinum L. HOM05D003948 ORTHO05D004610 3.0e-41 172.9 241 37.8
Ciclev10008863m.g Citrus clementina HOM05D003948 ORTHO05D004610 3.0e-41 172.9 260 38.8
Actinidia01766 Actinidia chinensis HOM05D003948 ORTHO05D004610 4.0e-41 172.6 258 39.1
Gohir.A10G076166 Gossypium hirsutum HOM05D003948 ORTHO05D004610 4.0e-41 172.6 266 37.6
MBI04_g24205_MAGBIO Magnolia biondii HOM05D003948 ORTHO05D004610 4.0e-41 172.6 259 37.5
Cpa.g.sc648.2 Carica papaya HOM05D003948 ORTHO05D004610 5.2e-41 172.2 253 39.1
Hma1.2p1_0317F.1_g123650 Hydrangea macrophylla HOM05D003948 ORTHO05D004610 5.2e-41 172.2 259 38.6
Gohir.D05G126200 Gossypium hirsutum HOM05D003948 ORTHO05D004610 6.7e-41 171.8 255 38.8
Gorai.009G130200 Gossypium raimondii HOM05D003948 ORTHO05D004610 6.7e-41 171.8 255 38.8
PGR031G2458 Punica granatum HOM05D003948 ORTHO05D004610 6.7e-41 171.8 256 36.7
QL02p087786 Quercus lobata HOM05D003948 ORTHO05D004610 6.7e-41 171.8 252 39.7
Atru.chr7.1198 Acer truncatum HOM05D003948 ORTHO05D004610 8.8e-41 171.4 256 37.9
Psat5g301000 Pisum sativum HOM05D003948 ORTHO05D004610 1.1e-40 171.0 241 38.2
Rhsim01G0076600 Rhododendron simsii HOM05D003948 ORTHO05D004610 1.1e-40 171.0 250 40.0
GSVIVG01017270001 Vitis vinifera HOM05D003948 ORTHO05D004610 1.1e-40 171.0 249 39.0
Carub.0001s1520 Capsella rubella HOM05D003948 ORTHO05D004610 1.5e-40 170.6 265 34.7
Cpa.g.sc10.224 Carica papaya HOM05D003948 ORTHO05D004610 2.0e-40 170.2 257 37.0
Lj3g0025185 Lotus japonicus HOM05D003948 ORTHO05D004610 2.0e-40 170.2 255 38.0
Gohir.A05G125200 Gossypium hirsutum HOM05D003948 ORTHO05D004610 2.6e-40 169.9 255 38.4
Lj3g0004615 Lotus japonicus HOM05D003948 ORTHO05D004610 2.6e-40 169.9 248 38.3
Mapoly0023s0100 Marchantia polymorpha HOM05D003948 ORTHO05D004610 2.6e-40 169.9 173 46.2
Aqoxy7G02097 Aquilegia oxysepala HOM05D003948 ORTHO05D004610 3.3e-40 169.5 250 38.0
Ciclev10026043m.g Citrus clementina HOM05D003948 ORTHO05D004610 3.3e-40 169.5 255 38.4
Medtr2g103300 Medicago truncatula HOM05D003948 ORTHO05D004610 3.3e-40 169.5 241 37.8
vmacro18966 Vaccinium macrocarpon HOM05D003948 ORTHO05D004610 3.3e-40 169.5 236 40.7
Cfa002007 Carpinus fangiana HOM05D003948 ORTHO05D004610 4.4e-40 169.1 249 38.6
ClCG06G010930 Citrullus lanatus HOM05D003948 ORTHO05D004610 5.7e-40 168.7 261 37.9
COL.COLO4_12905 Corchorus olitorius HOM05D003948 ORTHO05D004610 5.7e-40 168.7 261 38.7
Glyma.17G116500 Glycine max HOM05D003948 ORTHO05D004610 5.7e-40 168.7 260 38.1
Thecc.09G123100 Theobroma cacao HOM05D003948 ORTHO05D004610 5.7e-40 168.7 257 38.1
VMungo1080G0933 Vigna mungo HOM05D003948 ORTHO05D004610 5.7e-40 168.7 249 37.8
Actinidia15794 Actinidia chinensis HOM05D003948 ORTHO05D004610 7.5e-40 168.3 260 38.5
COL.COLO4_05762 Corchorus olitorius HOM05D003948 ORTHO05D004610 7.5e-40 168.3 264 37.1
Actinidia40456 Actinidia chinensis HOM05D003948 ORTHO05D004610 9.7e-40 167.9 264 36.7
Dinv30573 Davidia involucrata HOM05D003948 ORTHO05D004610 9.7e-40 167.9 263 38.4
Peaxi162Scf00274g00859 Petunia axillaris HOM05D003948 ORTHO05D004610 9.7e-40 167.9 260 38.5
TPR.G37189 Trifolium pratense HOM05D003948 ORTHO05D004610 9.7e-40 167.9 241 36.9
Ah.09g225870 Amaranthus hybridus HOM05D003948 ORTHO05D004610 1.3e-39 167.5 255 36.5
AL1G27520 Arabidopsis lyrata HOM05D003948 ORTHO05D004610 1.3e-39 167.5 265 34.3
CANSAT56G2529 Cannabis sativa HOM05D003948 ORTHO05D004610 1.3e-39 167.5 256 37.1
Haze_16515 Corylus avellana HOM05D003948 ORTHO05D004610 1.3e-39 167.5 249 37.8
Sabra03G0035900 Salix brachista HOM05D003948 ORTHO05D004610 1.7e-39 167.2 259 37.8
Sed0015734 Sechium edule HOM05D003948 ORTHO05D004610 1.7e-39 167.2 273 37.0
CiPaw.01G244700 Carya illinoinensis HOM05D003948 ORTHO05D004610 2.2e-39 166.8 254 37.8
Phvul.003G162800 Phaseolus vulgaris HOM05D003948 ORTHO05D004610 2.2e-39 166.8 267 38.2
TWI34G1010 Tripterygium wilfordii HOM05D003948 ORTHO05D004610 2.2e-39 166.8 267 37.1
Prupe.7G239700 Prunus persica HOM05D003948 ORTHO05D004610 2.8e-39 166.4 254 36.6
PGR142G4293 Punica granatum HOM05D003948 ORTHO05D004610 3.7e-39 166.0 265 37.0
Nitab4.5_0002257g0010 Nicotiana tabacum HOM05D003948 ORTHO05D004610 4.8e-39 165.6 258 37.2
Sp1g13770 Schrenkiella parvula HOM05D003948 ORTHO05D004610 4.8e-39 165.6 265 34.0
THA.LOC104813569 Tarenaya hassleriana HOM05D003948 ORTHO05D004610 4.8e-39 165.6 262 36.6
Duzib187G0771 Durio zibethinus HOM05D003948 ORTHO05D004610 6.3e-39 165.2 269 37.9
Dinv41531 Davidia involucrata HOM05D003948 ORTHO05D004610 1.1e-38 164.5 256 37.1
Duzib168G1107 Durio zibethinus HOM05D003948 ORTHO05D004610 1.1e-38 164.5 263 36.9
Potri.003G061800 Populus trichocarpa HOM05D003948 ORTHO05D004610 1.4e-38 164.1 259 37.5
TPR.G10716 Trifolium pratense HOM05D003948 ORTHO05D004610 1.8e-38 163.7 260 36.2
arahy.Tifrunner.gnm1.ann1.37ZKFY Arachis hypogaea HOM05D003948 ORTHO05D004610 2.4e-38 163.3 263 36.9
arahy.Tifrunner.gnm1.ann1.U8XBHX Arachis hypogaea HOM05D003948 ORTHO05D004610 2.4e-38 163.3 263 36.9
CAN.G407.106 Capsicum annuum HOM05D003948 ORTHO05D004610 2.4e-38 163.3 258 38.4
Nitab4.5_0006574g0020 Nicotiana tabacum HOM05D003948 ORTHO05D004610 2.4e-38 163.3 258 36.8
Glyma.13G363700 Glycine max HOM05D003948 ORTHO05D004610 3.1e-38 162.9 253 35.6
Glyma.15G010100 Glycine max HOM05D003948 ORTHO05D004610 3.1e-38 162.9 249 36.9
Glyma.05G008200 Glycine max HOM05D003948 ORTHO05D004610 4.1e-38 162.5 267 37.5
RcHm_v2.0_Chr2g0089121 Rosa chinensis HOM05D003948 ORTHO05D004610 4.1e-38 162.5 265 35.8
A06p11460 Brassica napus HOM05D003948 ORTHO05D004610 5.3e-38 162.2 263 33.5
C05p13580 Brassica napus HOM05D003948 ORTHO05D004610 5.3e-38 162.2 263 33.5
BraA06t24323Z Brassica rapa HOM05D003948 ORTHO05D004610 5.3e-38 162.2 263 33.5
Psat4g040400 Pisum sativum HOM05D003948 ORTHO05D004610 5.3e-38 162.2 260 36.5
Sopen03g035350 Solanum pennellii HOM05D003948 ORTHO05D004610 5.3e-38 162.2 256 37.1
BolC5t30094H Brassica oleracea HOM05D003948 ORTHO05D004610 7.0e-38 161.8 263 33.5
Cc04_g04060 Coffea canephora HOM05D003948 ORTHO05D004610 7.0e-38 161.8 250 36.0
FAN19G2000 Fragaria x ananassa HOM05D003948 ORTHO05D004610 7.0e-38 161.8 255 36.1
Lj4g0000861 Lotus japonicus HOM05D003948 ORTHO05D004610 7.0e-38 161.8 256 38.7
Rhsim01G0076700 Rhododendron simsii HOM05D003948 ORTHO05D004610 7.0e-38 161.8 251 37.8
VMungo1215G2012 Vigna mungo HOM05D003948 ORTHO05D004610 7.0e-38 161.8 267 37.5
FAN28G1194 Fragaria x ananassa HOM05D003948 ORTHO05D004610 9.1e-38 161.4 255 36.1
Gohir.A05G017900 Gossypium hirsutum HOM05D003948 ORTHO05D004610 9.1e-38 161.4 258 35.7
Gohir.D05G018800 Gossypium hirsutum HOM05D003948 ORTHO05D004610 9.1e-38 161.4 252 36.9
Thhalv10008186m.g Eutrema salsugineum HOM05D003948 ORTHO05D004610 1.2e-37 161.0 265 33.2
FvH4_1g03590 Fragaria vesca HOM05D003948 ORTHO05D004610 1.6e-37 160.6 255 35.7
PGSC0003DMG402000630 Solanum tuberosum HOM05D003948 ORTHO05D004610 1.6e-37 160.6 256 36.7
arahy.Tifrunner.gnm1.ann1.VXE6AC Arachis hypogaea HOM05D003948 ORTHO05D004610 2.0e-37 160.2 256 37.1
Cc06_g08780 Coffea canephora HOM05D003948 ORTHO05D004610 2.0e-37 160.2 246 36.6
Lalb_Chr22g0351001 Lupinus albus HOM05D003948 ORTHO05D004610 2.0e-37 160.2 259 35.9
Medtr4g114000 Medicago truncatula HOM05D003948 ORTHO05D004610 2.0e-37 160.2 259 37.5
AT1G15410 Arabidopsis thaliana HOM05D003948 ORTHO05D004610 2.7e-37 159.8 265 33.2
arahy.Tifrunner.gnm1.ann1.T1A9DJ Arachis hypogaea HOM05D003948 ORTHO05D004610 2.7e-37 159.8 256 36.7
FAN23G0975 Fragaria x ananassa HOM05D003948 ORTHO05D004610 2.7e-37 159.8 255 35.7
Ah.01g011210 Amaranthus hybridus HOM05D003948 ORTHO05D004610 3.5e-37 159.5 254 35.8
AUR62016374 Chenopodium quinoa HOM05D003948 ORTHO05D004610 3.5e-37 159.5 262 35.1
Dinv36546 Davidia involucrata HOM05D003948 ORTHO05D004610 3.5e-37 159.5 253 36.8
MSTRG.11117 Avicennia marina HOM05D003948 ORTHO05D004610 4.5e-37 159.1 250 38.4
FAN14G0295 Fragaria x ananassa HOM05D003948 ORTHO05D004610 4.5e-37 159.1 259 38.6
Gorai.001G040900 Gossypium raimondii HOM05D003948 ORTHO05D004610 5.9e-37 158.7 257 35.8
Gorai.009G019200 Gossypium raimondii HOM05D003948 ORTHO05D004610 5.9e-37 158.7 252 36.9
Lj7A632T42 Lonicera japonica HOM05D003948 ORTHO05D004610 5.9e-37 158.7 267 36.3
AUR62011555 Chenopodium quinoa HOM05D003948 ORTHO05D004610 7.7e-37 158.3 262 34.0
MD17G1205900 Malus domestica HOM05D003948 ORTHO05D004610 7.7e-37 158.3 251 35.9
RcHm_v2.0_Chr2g0136511 Rosa chinensis HOM05D003948 ORTHO05D004610 7.7e-37 158.3 263 36.1
EL10Ac8g18617 Beta vulgaris HOM05D003948 ORTHO05D004610 1.0e-36 157.9 257 36.6
Hma1.2p1_0018F.1_g012660 Hydrangea macrophylla HOM05D003948 ORTHO05D004610 1.0e-36 157.9 251 36.7
Prupe.3G081000 Prunus persica HOM05D003948 ORTHO05D004610 1.0e-36 157.9 243 37.0
CDE02G2452 Ceratophyllum demersum HOM05D003948 ORTHO05D004610 1.3e-36 157.5 251 33.9
MELO3C026644.2 Cucumis melo HOM05D003948 ORTHO05D004610 1.3e-36 157.5 256 37.5
FAN05G4627 Fragaria x ananassa HOM05D003948 ORTHO05D004610 1.3e-36 157.5 258 38.4
Ca_21696_v3 Cicer arietinum L. HOM05D003948 ORTHO05D004610 1.7e-36 157.1 258 36.8
Eucgr.C01133 Eucalyptus grandis HOM05D003948 ORTHO05D004610 2.2e-36 156.8 256 35.5
Solyc03g116460.4 Solanum lycopersicum HOM05D003948 ORTHO05D004610 2.2e-36 156.8 262 36.3
BcaC05g25483 Brassica carinata HOM05D003948 ORTHO05D004610 2.9e-36 156.4 263 33.1
FAN02G3756 Fragaria x ananassa HOM05D003948 ORTHO05D004610 2.9e-36 156.4 263 37.3
Gohir.A07G034800 Gossypium hirsutum HOM05D003948 ORTHO05D004610 2.9e-36 156.4 257 35.4
MD17G1205400 Malus domestica HOM05D003948 ORTHO05D004610 2.9e-36 156.4 250 35.2
Migut.D01056 Erythranthe guttata HOM05D003948 ORTHO05D004610 5.0e-36 155.6 246 35.8
Gohir.D07G038800 Gossypium hirsutum HOM05D003948 ORTHO05D004610 6.5e-36 155.2 257 35.4
Hma1.2p1_0018F.1_g012640 Hydrangea macrophylla HOM05D003948 ORTHO05D004610 6.5e-36 155.2 249 36.5
EL10Ac9g21937 Beta vulgaris HOM05D003948 ORTHO05D004610 1.5e-35 154.1 255 34.1
vmacro20597 Vaccinium macrocarpon HOM05D003948 ORTHO05D004610 7.2e-35 151.8 276 34.8
Zm00001eb342320 Zea mays HOM05D003948 ORTHO05D004610 7.2e-35 151.8 244 36.5
DCAR_025486 Daucus carota HOM05D003948 ORTHO05D004610 9.4e-35 151.4 251 37.8
CSS0016874 Camellia sinensis var. sinensis HOM05D003948 ORTHO05D004610 1.2e-34 151.0 252 35.7
AUR62033477 Chenopodium quinoa HOM05D003948 ORTHO05D004610 1.2e-34 151.0 253 34.0
SGA_v2.0_scaffold5G02657 Striga asiatica HOM05D003948 ORTHO05D004610 1.6e-34 150.6 173 44.5
AUR62011090 Chenopodium quinoa HOM05D003948 ORTHO05D004610 2.1e-34 150.2 253 34.4
Hund06577 Selenicereus undatus HOM05D003948 ORTHO05D004610 2.7e-34 149.8 255 33.7
FAN26G0686 Fragaria x ananassa HOM05D003948 ORTHO05D004610 4.7e-34 149.1 276 33.3
SalBow2G2418 Salvia bowleyana HOM05D003948 ORTHO05D004610 4.7e-34 149.1 256 35.9
Haze_25613 Corylus avellana HOM05D003948 ORTHO05D004610 6.1e-34 148.7 260 36.2
CANSAT11G2309 Cannabis sativa HOM05D003948 ORTHO05D004610 8.0e-34 148.3 256 35.5
DCAR_014870 Daucus carota HOM05D003948 ORTHO05D004610 3.0e-33 146.4 239 34.7
Os01g0555200 Oryza sativa ssp. japonica HOM05D003948 ORTHO05D004610 8.3e-31 138.3 243 33.3
SalBow2G0819 Salvia bowleyana HOM05D003948 ORTHO05D004610 5.4e-30 135.6 208 35.6
PSO170G0552 Papaver somniferum HOM05D003948 ORTHO05D004610 1.2e-29 134.4 213 36.6
ECA232G2488 Erigeron canadensis HOM05D003948 ORTHO05D004610 1.6e-29 134.0 156 42.3
GSVIVG01015502001 Vitis vinifera HOM05D003948 ORTHO05D004610 1.7e-28 130.6 156 41.0
Thecc.06G071300 Theobroma cacao HOM05D003948 ORTHO05D004610 5.0e-28 129.0 212 36.3
Gohir.D10G075401 Gossypium hirsutum HOM05D003948 ORTHO05D004610 7.2e-27 125.2 139 43.9
Sabra01G0139400 Salix brachista HOM05D003948 ORTHO05D004610 8.8e-25 118.2 289 29.8
Duzib235G1097 Durio zibethinus HOM05D003948 ORTHO05D004610 8.3e-23 111.7 203 35.0
Rhsim03G0104000 Rhododendron simsii HOM05D003948 ORTHO05D004610 8.6e-20 101.7 167 34.1
CARHR015950 Cardamine hirsuta HOM05D003948 ORTHO05D004610 8.9e-17 91.7 91 44.0
Lj5A69T36 Lonicera japonica HOM05D003948 ORTHO05D004610 2.6e-16 90.1 115 42.6
Lj1g0003343 Lotus japonicus HOM05D003948 ORTHO05D004610 2.6e-16 90.1 87 50.6
Dinv38099 Davidia involucrata HOM05D003948 ORTHO05D004610 1.3e-15 87.8 190 34.2
Nn2g11965 Nelumbo nucifera HOM05D003948 ORTHO05D004610 2.0e-13 80.5 171 31.0
FAN26G3201 Fragaria x ananassa HOM05D003948 ORTHO05D004610 2.7e-13 80.1 75 49.3
MD02G1035500 Malus domestica HOM05D003948 ORTHO05D004610 5.9e-13 79.0 173 28.3
CARHR015960 Cardamine hirsuta HOM05D003948 ORTHO05D004610 1.0e-12 78.2 174 28.7
Atru.chr1.3072 Acer truncatum HOM05D003948 ORTHO05D004610 8.6e-12 75.1 217 27.6
FvH4_6g30270 Fragaria vesca HOM05D003948 ORTHO05D004610 1.5e-11 74.3 173 32.4
Sc18g0000700 Simmondsia chinensis HOM05D003948 ORTHO05D004610 1.9e-11 73.9 145 31.0
Oeu041220.1 Olea europaea HOM05D003948 ORTHO05D004610 3.6e-10 69.7 74 47.3
AUR62011108 Chenopodium quinoa HOM05D003948 ORTHO05D004610 1.0e-09 68.2 163 27.0
Phvul.005G175301 Phaseolus vulgaris HOM05D003948 ORTHO05D004610 6.8e-09 65.5 133 30.1
Peaxi162Scf00274g00858 Petunia axillaris HOM05D003948 ORTHO05D004610 1.1e-06 58.2 73 38.4


User provided reference genes

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