Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO271G0176 Selaginella moellendorffii HOM05D006796 ORTHO05D008615 1.1e-110 403.3 200 100.0
Mapoly0042s0065 Marchantia polymorpha HOM05D006796 ORTHO05D008615 5.5e-54 214.9 222 54.5
Cpa.g.sc1.63 Carica papaya HOM05D006796 ORTHO05D008615 2.4e-49 199.5 210 54.8
arahy.Tifrunner.gnm1.ann1.NP20FV Arachis hypogaea HOM05D006796 ORTHO05D008615 3.1e-49 199.1 211 54.0
arahy.Tifrunner.gnm1.ann1.R8NX8D Arachis hypogaea HOM05D006796 ORTHO05D008615 3.1e-49 199.1 211 54.0
SalBow8G2627 Salvia bowleyana HOM05D006796 ORTHO05D008615 9.1e-49 197.6 207 53.1
TPR.G19931 Trifolium pratense HOM05D006796 ORTHO05D008615 9.1e-49 197.6 208 52.9
Haze_11961 Corylus avellana HOM05D006796 ORTHO05D008615 1.2e-48 197.2 218 52.3
SGA_v2.0_scaffold63G21639 Striga asiatica HOM05D006796 ORTHO05D008615 2.0e-48 196.4 208 52.9
TWI31G0717 Tripterygium wilfordii HOM05D006796 ORTHO05D008615 2.0e-48 196.4 211 53.1
Eucgr.B03198 Eucalyptus grandis HOM05D006796 ORTHO05D008615 2.7e-48 196.1 211 53.6
BraA06t24185Z Brassica rapa HOM05D006796 ORTHO05D008615 3.5e-48 195.7 220 50.9
Potri.010G164400 Populus trichocarpa HOM05D006796 ORTHO05D008615 3.5e-48 195.7 211 52.6
Sabra10G0124800 Salix brachista HOM05D006796 ORTHO05D008615 3.5e-48 195.7 211 52.6
Dinv34092 Davidia involucrata HOM05D006796 ORTHO05D008615 5.9e-48 194.9 224 50.4
Psat2g126440 Pisum sativum HOM05D006796 ORTHO05D008615 5.9e-48 194.9 211 53.1
CDE02G1750 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 7.7e-48 194.5 211 51.7
Migut.L01249 Erythranthe guttata HOM05D006796 ORTHO05D008615 7.7e-48 194.5 207 52.2
Phvul.002G103200 Phaseolus vulgaris HOM05D006796 ORTHO05D008615 7.7e-48 194.5 212 52.4
VMungo1215G0648 Vigna mungo HOM05D006796 ORTHO05D008615 7.7e-48 194.5 212 52.4
Hund25209 Selenicereus undatus HOM05D006796 ORTHO05D008615 1.3e-47 193.7 211 50.2
MSTRG.2332 Avicennia marina HOM05D006796 ORTHO05D008615 1.7e-47 193.4 207 52.2
Glyma.02G111300 Glycine max HOM05D006796 ORTHO05D008615 1.7e-47 193.4 212 52.4
Lj2g0006920 Lotus japonicus HOM05D006796 ORTHO05D008615 2.3e-47 193.0 211 52.1
BolC5t29921H Brassica oleracea HOM05D006796 ORTHO05D008615 2.9e-47 192.6 209 53.6
CiPaw.07G071700 Carya illinoinensis HOM05D006796 ORTHO05D008615 3.8e-47 192.2 211 53.1
Ca_04876_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 3.8e-47 192.2 211 52.1
PGR102G1583 Punica granatum HOM05D006796 ORTHO05D008615 3.8e-47 192.2 211 52.6
TAR629G0550 Trochodendron aralioides HOM05D006796 ORTHO05D008615 3.8e-47 192.2 211 52.1
CsaV3_5G022970 Cucumis sativus L. HOM05D006796 ORTHO05D008615 6.5e-47 191.4 209 52.2
Gohir.D04G191000 Gossypium hirsutum HOM05D006796 ORTHO05D008615 6.5e-47 191.4 211 51.7
Gorai.012G186400 Gossypium raimondii HOM05D006796 ORTHO05D008615 6.5e-47 191.4 211 51.7
Lalb_Chr10g0098461 Lupinus albus HOM05D006796 ORTHO05D008615 6.5e-47 191.4 212 51.9
CARHR014360 Cardamine hirsuta HOM05D006796 ORTHO05D008615 8.6e-47 191.0 205 52.2
Glyma.01G052700 Glycine max HOM05D006796 ORTHO05D008615 8.6e-47 191.0 213 51.6
MSTRG.13431 Avicennia marina HOM05D006796 ORTHO05D008615 1.1e-46 190.7 207 52.2
Manes.05G105900 Manihot esculenta HOM05D006796 ORTHO05D008615 1.1e-46 190.7 211 52.1
Thecc.02G339900 Theobroma cacao HOM05D006796 ORTHO05D008615 1.1e-46 190.7 211 52.6
GSVIVG01012496001 Vitis vinifera HOM05D006796 ORTHO05D008615 1.1e-46 190.7 215 51.2
MELO3C002984.2 Cucumis melo HOM05D006796 ORTHO05D008615 1.5e-46 190.3 233 48.1
Peaxi162Scf00222g00236 Petunia axillaris HOM05D006796 ORTHO05D008615 1.5e-46 190.3 204 51.0
THA.LOC104805179 Tarenaya hassleriana HOM05D006796 ORTHO05D008615 1.9e-46 189.9 203 51.7
EL10Ac6g13260 Beta vulgaris HOM05D006796 ORTHO05D008615 2.5e-46 189.5 211 50.7
Nn4g23271 Nelumbo nucifera HOM05D006796 ORTHO05D008615 2.5e-46 189.5 211 51.7
Aa31LG1G1040 Aethionema arabicum HOM05D006796 ORTHO05D008615 3.3e-46 189.1 231 47.2
MD16G1067400 Malus domestica HOM05D006796 ORTHO05D008615 3.3e-46 189.1 206 52.9
Prupe.1G279300 Prunus persica HOM05D006796 ORTHO05D008615 3.3e-46 189.1 206 53.4
AL1G25830 Arabidopsis lyrata HOM05D006796 ORTHO05D008615 4.2e-46 188.7 205 51.7
AT1G13990 Arabidopsis thaliana HOM05D006796 ORTHO05D008615 4.2e-46 188.7 205 52.2
ClCG09G022060 Citrullus lanatus HOM05D006796 ORTHO05D008615 5.5e-46 188.3 209 51.7
Duzib268G1785 Durio zibethinus HOM05D006796 ORTHO05D008615 5.5e-46 188.3 211 51.7
Atru.chr11.1722 Acer truncatum HOM05D006796 ORTHO05D008615 7.2e-46 188.0 210 51.4
ATR0564G337 Amborella trichopoda HOM05D006796 ORTHO05D008615 7.2e-46 188.0 211 51.2
CSS0026382 Camellia sinensis var. sinensis HOM05D006796 ORTHO05D008615 7.2e-46 188.0 211 51.2
RcHm_v2.0_Chr4g0439161 Rosa chinensis HOM05D006796 ORTHO05D008615 7.2e-46 188.0 206 52.4
FAN07G2185 Fragaria x ananassa HOM05D006796 ORTHO05D008615 9.5e-46 187.6 206 52.4
FvH4_4g30770 Fragaria vesca HOM05D006796 ORTHO05D008615 1.2e-45 187.2 206 52.4
FAN12G1163 Fragaria x ananassa HOM05D006796 ORTHO05D008615 1.2e-45 187.2 206 52.4
FAN22G2031 Fragaria x ananassa HOM05D006796 ORTHO05D008615 1.2e-45 187.2 206 52.4
Lsat_1_v5_gn_4_10660 Lactuca sativa HOM05D006796 ORTHO05D008615 1.2e-45 187.2 203 51.2
Carub.0001s1368 Capsella rubella HOM05D006796 ORTHO05D008615 1.6e-45 186.8 205 51.2
ECA234G4054 Erigeron canadensis HOM05D006796 ORTHO05D008615 1.6e-45 186.8 207 51.2
TAR371G0712 Trochodendron aralioides HOM05D006796 ORTHO05D008615 1.6e-45 186.8 211 50.7
CAN.G964.30 Capsicum annuum HOM05D006796 ORTHO05D008615 2.1e-45 186.4 207 52.2
Thhalv10008453m.g Eutrema salsugineum HOM05D006796 ORTHO05D008615 2.1e-45 186.4 205 51.7
Sc11g0002140 Simmondsia chinensis HOM05D006796 ORTHO05D008615 2.1e-45 186.4 211 49.8
Cc11_g12630 Coffea canephora HOM05D006796 ORTHO05D008615 2.8e-45 186.0 207 51.7
PSO017G7370 Papaver somniferum HOM05D006796 ORTHO05D008615 3.6e-45 185.7 209 49.8
BcaC05g25295 Brassica carinata HOM05D006796 ORTHO05D008615 4.7e-45 185.3 205 51.7
C05p11750 Brassica napus HOM05D006796 ORTHO05D008615 4.7e-45 185.3 205 51.7
Zm00001eb402440 Zea mays HOM05D006796 ORTHO05D008615 4.7e-45 185.3 207 52.2
Ciclev10032381m.g Citrus clementina HOM05D006796 ORTHO05D008615 6.1e-45 184.9 211 50.7
Aqoxy3G00482 Aquilegia oxysepala HOM05D006796 ORTHO05D008615 8.0e-45 184.5 211 48.8
PSO478G1165 Papaver somniferum HOM05D006796 ORTHO05D008615 8.0e-45 184.5 209 49.8
Gohir.D04G190901 Gossypium hirsutum HOM05D006796 ORTHO05D008615 2.3e-44 183.0 210 50.0
Hma1.2p1_0354F.1_g133830 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 2.3e-44 183.0 214 51.4
MD13G1068600 Malus domestica HOM05D006796 ORTHO05D008615 2.3e-44 183.0 206 51.5
Sopen05g007830 Solanum pennellii HOM05D006796 ORTHO05D008615 2.3e-44 183.0 207 51.2
Lj3A1033T56 Lonicera japonica HOM05D006796 ORTHO05D008615 4.0e-44 182.2 207 50.2
Actinidia19934 Actinidia chinensis HOM05D006796 ORTHO05D008615 8.9e-44 181.0 211 49.8
Nitab4.5_0000391g0260 Nicotiana tabacum HOM05D006796 ORTHO05D008615 1.2e-43 180.6 207 50.7
PGSC0003DMG400028345 Solanum tuberosum HOM05D006796 ORTHO05D008615 1.2e-43 180.6 207 50.7
Os03g0168200 Oryza sativa ssp. japonica HOM05D006796 ORTHO05D008615 1.5e-43 180.3 207 51.7
vmacro01347 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 2.0e-43 179.9 212 49.5
CANSAT64G1871 Cannabis sativa HOM05D006796 ORTHO05D008615 3.4e-43 179.1 211 49.8
AUR62032832 Chenopodium quinoa HOM05D006796 ORTHO05D008615 1.3e-42 177.2 211 49.8
CiPaw.05G129900 Carya illinoinensis HOM05D006796 ORTHO05D008615 2.2e-42 176.4 209 51.2
CBR_g41640 Chara braunii HOM05D006796 ORTHO05D008615 4.9e-42 175.3 240 46.7
Oeu055099.3 Olea europaea HOM05D006796 ORTHO05D008615 6.3e-42 174.9 259 41.7
A06p09990 Brassica napus HOM05D006796 ORTHO05D008615 7.0e-41 171.4 226 46.9
HPP92_016903 Vanilla planifolia HOM05D006796 ORTHO05D008615 7.0e-41 171.4 211 49.3
AUR62005838 Chenopodium quinoa HOM05D006796 ORTHO05D008615 9.2e-41 171.0 206 49.5
QL03p069702 Quercus lobata HOM05D006796 ORTHO05D008615 9.2e-41 171.0 274 41.2
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 2.7e-40 169.5 203 49.8
Cfa008932 Carpinus fangiana HOM05D006796 ORTHO05D008615 6.6e-39 164.9 170 54.7
COL.COLO4_27978 Corchorus olitorius HOM05D006796 ORTHO05D008615 8.6e-39 164.5 198 49.5
Nitab4.5_0004906g0020 Nicotiana tabacum HOM05D006796 ORTHO05D008615 4.4e-35 152.1 159 53.5
Sed0012383 Sechium edule HOM05D006796 ORTHO05D008615 1.2e-32 144.1 186 46.2
HanXRQChr12g0379181 Helianthus annuus HOM05D006796 ORTHO05D008615 3.0e-31 139.4 167 47.9
arahy.Tifrunner.gnm1.ann1.T4YGUP Arachis hypogaea HOM05D006796 ORTHO05D008615 2.1e-29 133.3 164 50.6
Actinidia31964 Actinidia chinensis HOM05D006796 ORTHO05D008615 2.9e-26 122.9 142 50.7
Gohir.1Z049816 Gossypium hirsutum HOM05D006796 ORTHO05D008615 4.9e-26 122.1 138 51.4
Potri.008G090900 Populus trichocarpa HOM05D006796 ORTHO05D008615 1.1e-25 120.9 199 40.2
AagrBONN_evm.TU.Sc2ySwM_344.1473 Anthoceros agrestis HOM05D006796 ORTHO05D008615 1.2e-24 117.5 150 48.7
Medtr5g042520 Medicago truncatula HOM05D006796 ORTHO05D008615 2.5e-22 109.8 140 48.6
Hma1.2p1_0354F.1_g133820 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 9.2e-17 91.3 108 50.0
Rhsim12G0078900 Rhododendron simsii HOM05D006796 ORTHO05D008615 1.7e-15 87.0 73 61.6
Solyc05g013060.4 Solanum lycopersicum HOM05D006796 ORTHO05D008615 3.0e-15 86.3 109 45.0
SEGI_14917 Sequoiadendron giganteum HOM05D006796 ORTHO05D008615 5.1e-15 85.5 73 57.5
CDE09G0941 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 1.1e-14 84.3 74 56.8
Nn2g13928 Nelumbo nucifera HOM05D006796 ORTHO05D008615 3.5e-08 62.8 66 53.0


User provided reference genes

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