Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO270G0141 Selaginella moellendorffii HOM05D003444 ORTHO05D003963 3.7e-100 368.2 191 100.0
SMO270G0025 Selaginella moellendorffii HOM05D003444 ORTHO05D003963 9.6e-48 194.1 236 54.7
Mapoly0061s0094 Marchantia polymorpha HOM05D003444 ORTHO05D003963 9.1e-14 81.3 230 29.1
Pp3c8_10480 Physcomitrium patens HOM05D003444 ORTHO05D003963 1.2e-13 80.9 233 27.9
COL.COLO4_30123 Corchorus olitorius HOM05D003444 ORTHO05D003963 5.5e-11 72.0 93 34.4
DCAR_026161 Daucus carota HOM05D003444 ORTHO05D003963 1.6e-10 70.5 93 34.4
BcaB02g07746 Brassica carinata HOM05D003444 ORTHO05D003963 2.7e-10 69.7 87 36.8
Duzib205G1696 Durio zibethinus HOM05D003444 ORTHO05D003963 2.7e-10 69.7 85 36.5
Dinv38555 Davidia involucrata HOM05D003444 ORTHO05D003963 8.0e-10 68.2 88 34.1
Peaxi162Scf00089g01529 Petunia axillaris HOM05D003444 ORTHO05D003963 8.0e-10 68.2 93 33.3
CSS0016754 Camellia sinensis var. sinensis HOM05D003444 ORTHO05D003963 1.0e-09 67.8 88 34.1
CSS0046637 Camellia sinensis var. sinensis HOM05D003444 ORTHO05D003963 1.8e-09 67.0 84 34.5
Ciclev10020974m.g Citrus clementina HOM05D003444 ORTHO05D003963 1.8e-09 67.0 88 34.1
Manes.14G062700 Manihot esculenta HOM05D003444 ORTHO05D003963 1.8e-09 67.0 95 30.5
TAR629G1253 Trochodendron aralioides HOM05D003444 ORTHO05D003963 2.3e-09 66.6 88 34.1
Actinidia19346 Actinidia chinensis HOM05D003444 ORTHO05D003963 3.0e-09 66.2 88 33.0
BcaNung05459 Brassica carinata HOM05D003444 ORTHO05D003963 3.0e-09 66.2 87 35.6
A07p22020 Brassica napus HOM05D003444 ORTHO05D003963 3.0e-09 66.2 87 35.6
C06p22000 Brassica napus HOM05D003444 ORTHO05D003963 3.0e-09 66.2 87 35.6
BolC6t37388H Brassica oleracea HOM05D003444 ORTHO05D003963 3.0e-09 66.2 87 35.6
BraA07t29885Z Brassica rapa HOM05D003444 ORTHO05D003963 3.0e-09 66.2 87 35.6
MD06G1169900 Malus domestica HOM05D003444 ORTHO05D003963 3.0e-09 66.2 88 35.2
PGR083G1868 Punica granatum HOM05D003444 ORTHO05D003963 3.0e-09 66.2 88 31.8
Eucgr.B03880 Eucalyptus grandis HOM05D003444 ORTHO05D003963 4.0e-09 65.9 88 31.8
Gohir.A07G063100 Gossypium hirsutum HOM05D003444 ORTHO05D003963 5.2e-09 65.5 88 33.0
TPR.G37557 Trifolium pratense HOM05D003444 ORTHO05D003963 5.2e-09 65.5 88 36.4
GSVIVG01007683001 Vitis vinifera HOM05D003444 ORTHO05D003963 5.2e-09 65.5 88 31.8
Prupe.5G169400 Prunus persica HOM05D003444 ORTHO05D003963 6.8e-09 65.1 88 34.1
PGSC0003DMG400018108 Solanum tuberosum HOM05D003444 ORTHO05D003963 6.8e-09 65.1 88 33.0
Ah.11g051380 Amaranthus hybridus HOM05D003444 ORTHO05D003963 8.8e-09 64.7 87 33.3
CANSAT80G2021 Cannabis sativa HOM05D003444 ORTHO05D003963 8.8e-09 64.7 88 34.1
Ca_21949_v3 Cicer arietinum L. HOM05D003444 ORTHO05D003963 8.8e-09 64.7 87 35.6
AagrBONN_evm.TU.Sc2ySwM_362.1384 Anthoceros agrestis HOM05D003444 ORTHO05D003963 1.5e-08 63.9 89 36.0
Nn4g22663 Nelumbo nucifera HOM05D003444 ORTHO05D003963 1.5e-08 63.9 88 33.0
Sed0021330 Sechium edule HOM05D003444 ORTHO05D003963 1.5e-08 63.9 93 33.3
Thecc.03G023900 Theobroma cacao HOM05D003444 ORTHO05D003963 1.5e-08 63.9 87 33.3
Hund09457 Selenicereus undatus HOM05D003444 ORTHO05D003963 2.0e-08 63.5 87 32.2
TWI75G1457 Tripterygium wilfordii HOM05D003444 ORTHO05D003963 2.0e-08 63.5 137 28.5
arahy.Tifrunner.gnm1.ann1.9FBM9V Arachis hypogaea HOM05D003444 ORTHO05D003963 3.4e-08 62.8 88 34.1
arahy.Tifrunner.gnm1.ann1.BAEJ4E Arachis hypogaea HOM05D003444 ORTHO05D003963 3.4e-08 62.8 88 34.1
arahy.Tifrunner.gnm1.ann1.GAE861 Arachis hypogaea HOM05D003444 ORTHO05D003963 3.4e-08 62.8 88 34.1
AUR62008171 Chenopodium quinoa HOM05D003444 ORTHO05D003963 3.4e-08 62.8 87 33.3
Dinv20618 Davidia involucrata HOM05D003444 ORTHO05D003963 3.4e-08 62.8 84 33.3
Aa31sc491G40 Aethionema arabicum HOM05D003444 ORTHO05D003963 4.4e-08 62.4 87 32.2
AUR62028748 Chenopodium quinoa HOM05D003444 ORTHO05D003963 4.4e-08 62.4 83 33.7
Rhsim08G0175500 Rhododendron simsii HOM05D003444 ORTHO05D003963 4.4e-08 62.4 85 30.6
Solyc03g112520.3 Solanum lycopersicum HOM05D003444 ORTHO05D003963 4.4e-08 62.4 87 32.2
Sopen03g031580 Solanum pennellii HOM05D003444 ORTHO05D003963 4.4e-08 62.4 87 32.2
SGA_v2.0_scaffold25G10811 Striga asiatica HOM05D003444 ORTHO05D003963 4.4e-08 62.4 87 31.0
CSS0038142 Camellia sinensis var. sinensis HOM05D003444 ORTHO05D003963 5.7e-08 62.0 100 31.0
CSS0050476 Camellia sinensis var. sinensis HOM05D003444 ORTHO05D003963 5.7e-08 62.0 100 31.0
Cc04_g12590 Coffea canephora HOM05D003444 ORTHO05D003963 5.7e-08 62.0 81 33.3
SEGI_34823 Sequoiadendron giganteum HOM05D003444 ORTHO05D003963 5.7e-08 62.0 77 37.7
unitig_8.g3056 Utricularia gibba HOM05D003444 ORTHO05D003963 5.7e-08 62.0 77 35.1
arahy.Tifrunner.gnm1.ann1.NDZJ5A Arachis hypogaea HOM05D003444 ORTHO05D003963 7.5e-08 61.6 81 35.8
Sc12g0005160 Simmondsia chinensis HOM05D003444 ORTHO05D003963 7.5e-08 61.6 87 32.2
Glyma.17G086600 Glycine max HOM05D003444 ORTHO05D003963 9.8e-08 61.2 87 31.0
TWI79G0312 Tripterygium wilfordii HOM05D003444 ORTHO05D003963 9.8e-08 61.2 143 26.6
arahy.Tifrunner.gnm1.ann1.9G140L Arachis hypogaea HOM05D003444 ORTHO05D003963 1.3e-07 60.8 80 32.5
Sed0013109 Sechium edule HOM05D003444 ORTHO05D003963 1.3e-07 60.8 90 32.2
SGA_v2.0_scaffold90G27874 Striga asiatica HOM05D003444 ORTHO05D003963 2.2e-07 60.1 87 29.9
TPR.G7254 Trifolium pratense HOM05D003444 ORTHO05D003963 2.2e-07 60.1 87 34.5
Aqoxy3G01091 Aquilegia oxysepala HOM05D003444 ORTHO05D003963 2.8e-07 59.7 88 31.8
Duzib068G1143 Durio zibethinus HOM05D003444 ORTHO05D003963 2.8e-07 59.7 88 30.7
MBI10_g32035_MAGBIO Magnolia biondii HOM05D003444 ORTHO05D003963 2.8e-07 59.7 88 29.5
HPP92_013532 Vanilla planifolia HOM05D003444 ORTHO05D003963 2.8e-07 59.7 87 31.0
Lsat_1_v5_gn_1_28101 Lactuca sativa HOM05D003444 ORTHO05D003963 3.7e-07 59.3 71 35.2
MSTRG.23156 Avicennia marina HOM05D003444 ORTHO05D003963 4.8e-07 58.9 83 30.1
A09p47170 Brassica napus HOM05D003444 ORTHO05D003963 4.8e-07 58.9 72 36.1
BraA09t40179Z Brassica rapa HOM05D003444 ORTHO05D003963 4.8e-07 58.9 72 36.1
CiPaw.11G022500 Carya illinoinensis HOM05D003444 ORTHO05D003963 4.8e-07 58.9 87 29.9
Manes.06G108200 Manihot esculenta HOM05D003444 ORTHO05D003963 4.8e-07 58.9 94 33.0
VMungo1309G2319 Vigna mungo HOM05D003444 ORTHO05D003963 4.8e-07 58.9 85 29.4
C08p29430 Brassica napus HOM05D003444 ORTHO05D003963 6.3e-07 58.5 71 36.6
BolC8t50544H Brassica oleracea HOM05D003444 ORTHO05D003963 6.3e-07 58.5 71 36.6
Glyma.05G040200 Glycine max HOM05D003444 ORTHO05D003963 6.3e-07 58.5 97 29.9
Lj5A128T62 Lonicera japonica HOM05D003444 ORTHO05D003963 6.3e-07 58.5 81 32.1
Sp5g08230 Schrenkiella parvula HOM05D003444 ORTHO05D003963 6.3e-07 58.5 71 36.6
MELO3C026275.2 Cucumis melo HOM05D003444 ORTHO05D003963 8.3e-07 58.2 71 36.6
CsaV3_1G001270 Cucumis sativus L. HOM05D003444 ORTHO05D003963 8.3e-07 58.2 71 36.6
Potri.002G197600 Populus trichocarpa HOM05D003444 ORTHO05D003963 8.3e-07 58.2 71 35.2
FvH4_5g05840 Fragaria vesca HOM05D003444 ORTHO05D003963 1.1e-06 57.8 87 32.2
FAN18G3108 Fragaria x ananassa HOM05D003444 ORTHO05D003963 1.1e-06 57.8 87 32.2
Hma1.2p1_0046F.1_g026860 Hydrangea macrophylla HOM05D003444 ORTHO05D003963 1.1e-06 57.8 73 34.2
vmacro19323 Vaccinium macrocarpon HOM05D003444 ORTHO05D003963 1.1e-06 57.8 124 25.8
Aqoxy1G03753 Aquilegia oxysepala HOM05D003444 ORTHO05D003963 1.4e-06 57.4 88 30.7
Aqoxy3G02821 Aquilegia oxysepala HOM05D003444 ORTHO05D003963 1.4e-06 57.4 88 30.7
arahy.Tifrunner.gnm1.ann1.7R0LHS Arachis hypogaea HOM05D003444 ORTHO05D003963 1.4e-06 57.4 77 32.5
arahy.Tifrunner.gnm1.ann1.WUU0A4 Arachis hypogaea HOM05D003444 ORTHO05D003963 1.4e-06 57.4 80 31.2
Haze_07554 Corylus avellana HOM05D003444 ORTHO05D003963 1.4e-06 57.4 77 32.5
ECA247G0281 Erigeron canadensis HOM05D003444 ORTHO05D003963 1.4e-06 57.4 71 35.2
Psat4g060120 Pisum sativum HOM05D003444 ORTHO05D003963 1.4e-06 57.4 73 37.0
EL10Ac5g10690 Beta vulgaris HOM05D003444 ORTHO05D003963 1.8e-06 57.0 100 28.0
FAN13G0471 Fragaria x ananassa HOM05D003444 ORTHO05D003963 1.8e-06 57.0 83 32.5
FAN04G2640 Fragaria x ananassa HOM05D003444 ORTHO05D003963 2.4e-06 56.6 87 31.0
arahy.Tifrunner.gnm1.ann1.N68Y16 Arachis hypogaea HOM05D003444 ORTHO05D003963 3.1e-06 56.2 102 29.4
Cpa.g.sc35.80 Carica papaya HOM05D003444 ORTHO05D003963 3.1e-06 56.2 74 33.8
Os06g0474200 Oryza sativa ssp. japonica HOM05D003444 ORTHO05D003963 3.1e-06 56.2 87 31.0
PSO017G6313 Papaver somniferum HOM05D003444 ORTHO05D003963 3.1e-06 56.2 73 35.6
QL10p008640 Quercus lobata HOM05D003444 ORTHO05D003963 3.1e-06 56.2 68 33.8
CARHR082370 Cardamine hirsuta HOM05D003444 ORTHO05D003963 4.1e-06 55.8 103 30.1
ClCG09G013270 Citrullus lanatus HOM05D003444 ORTHO05D003963 4.1e-06 55.8 68 36.8
Cfa019176 Carpinus fangiana HOM05D003444 ORTHO05D003963 5.4e-06 55.5 73 32.9
Eucgr.B00240 Eucalyptus grandis HOM05D003444 ORTHO05D003963 5.4e-06 55.5 71 31.0
Nitab4.5_0001647g0010 Nicotiana tabacum HOM05D003444 ORTHO05D003963 5.4e-06 55.5 71 33.8
PSO478G2857 Papaver somniferum HOM05D003444 ORTHO05D003963 5.4e-06 55.5 71 36.6
Thhalv10010523m.g Eutrema salsugineum HOM05D003444 ORTHO05D003963 7.0e-06 55.1 70 35.7
FAN08G2080 Fragaria x ananassa HOM05D003444 ORTHO05D003963 7.0e-06 55.1 87 31.0
Gorai.001G071300 Gossypium raimondii HOM05D003444 ORTHO05D003963 7.0e-06 55.1 71 33.8
Lalb_Chr12g0201761 Lupinus albus HOM05D003444 ORTHO05D003963 7.0e-06 55.1 73 34.2
Phvul.002G107400 Phaseolus vulgaris HOM05D003444 ORTHO05D003963 7.0e-06 55.1 85 28.2
QL10p008500 Quercus lobata HOM05D003444 ORTHO05D003963 7.0e-06 55.1 70 32.9
SMO163G0050 Selaginella moellendorffii HOM05D000046 ORTHO05D379140 7.0e-06 55.1 116 39.7
Zm00001eb209200 Zea mays HOM05D003444 ORTHO05D003963 7.0e-06 55.1 77 33.8
CAN.G338.8 Capsicum annuum HOM05D003444 ORTHO05D003963 9.1e-06 54.7 71 33.8
Medtr0325s0020 Medicago truncatula HOM05D003444 ORTHO05D003963 9.1e-06 54.7 88 30.7
SalBow5G0548 Salvia bowleyana HOM05D003444 ORTHO05D003963 9.1e-06 54.7 71 32.4


User provided reference genes

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