Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO270G0095 Selaginella moellendorffii HOM05D006606 ORTHO05D008429 4.1e-167 591.3 291 100.0
Pp3c1_22590 Physcomitrium patens HOM05D006606 ORTHO05D008429 6.4e-128 461.1 291 73.2
AagrBONN_evm.TU.Sc2ySwM_228.2148 Anthoceros agrestis HOM05D006606 ORTHO05D008429 5.5e-127 458.0 291 74.6
Glyma.18G004400 Glycine max HOM05D006606 ORTHO05D008429 4.8e-123 444.9 291 71.8
Glyma.11G252500 Glycine max HOM05D006606 ORTHO05D008429 1.1e-122 443.7 290 71.4
Lalb_Chr23g0278211 Lupinus albus HOM05D006606 ORTHO05D008429 1.1e-122 443.7 290 71.7
CANSAT78G0692 Cannabis sativa HOM05D006606 ORTHO05D008429 1.4e-122 443.4 291 71.1
TAR362G1133 Trochodendron aralioides HOM05D006606 ORTHO05D008429 1.2e-121 440.3 291 70.8
Phvul.001G263600 Phaseolus vulgaris HOM05D006606 ORTHO05D008429 2.0e-121 439.5 290 70.7
arahy.Tifrunner.gnm1.ann1.B1TKD1 Arachis hypogaea HOM05D006606 ORTHO05D008429 3.4e-121 438.7 291 70.8
VMungo1383G1705 Vigna mungo HOM05D006606 ORTHO05D008429 3.4e-121 438.7 291 70.8
Ah.04g149880 Amaranthus hybridus HOM05D006606 ORTHO05D008429 4.5e-121 438.3 291 70.1
arahy.Tifrunner.gnm1.ann1.V8KL47 Arachis hypogaea HOM05D006606 ORTHO05D008429 1.0e-120 437.2 291 70.1
CSS0008381 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 1.3e-120 436.8 291 69.8
Cc03_g10820 Coffea canephora HOM05D006606 ORTHO05D008429 2.9e-120 435.6 291 68.7
FAN12G1058 Fragaria x ananassa HOM05D006606 ORTHO05D008429 2.9e-120 435.6 291 69.4
FAN12G2609 Fragaria x ananassa HOM05D006606 ORTHO05D008429 2.9e-120 435.6 291 69.4
Potri.014G146900 Populus trichocarpa HOM05D006606 ORTHO05D008429 2.9e-120 435.6 291 70.4
FAN17G1362 Fragaria x ananassa HOM05D006606 ORTHO05D008429 3.8e-120 435.3 291 69.4
FAN22G0658 Fragaria x ananassa HOM05D006606 ORTHO05D008429 3.8e-120 435.3 291 69.4
CSS0041194 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 6.5e-120 434.5 291 69.1
CiPaw.03G116300 Carya illinoinensis HOM05D006606 ORTHO05D008429 6.5e-120 434.5 291 69.1
AUR62020943 Chenopodium quinoa HOM05D006606 ORTHO05D008429 6.5e-120 434.5 291 69.4
Psat7g076840 Pisum sativum HOM05D006606 ORTHO05D008429 6.5e-120 434.5 291 70.4
FvH4_4g12260 Fragaria vesca HOM05D006606 ORTHO05D008429 8.4e-120 434.1 291 69.1
Hma1.2p1_1286F.1_g273130 Hydrangea macrophylla HOM05D006606 ORTHO05D008429 8.4e-120 434.1 291 70.1
Dinv22706 Davidia involucrata HOM05D006606 ORTHO05D008429 1.4e-119 433.3 291 70.1
Lj4g0003716 Lotus japonicus HOM05D006606 ORTHO05D008429 1.9e-119 433.0 291 68.0
Lalb_Chr11g0075821 Lupinus albus HOM05D006606 ORTHO05D008429 1.9e-119 433.0 291 70.8
Eucgr.C03850 Eucalyptus grandis HOM05D006606 ORTHO05D008429 2.5e-119 432.6 294 70.1
Mapoly0040s0091 Marchantia polymorpha HOM05D006606 ORTHO05D008429 3.2e-119 432.2 291 69.1
Medtr8g097190 Medicago truncatula HOM05D006606 ORTHO05D008429 3.2e-119 432.2 291 70.1
Thecc.08G146500 Theobroma cacao HOM05D006606 ORTHO05D008429 3.2e-119 432.2 291 68.0
PGSC0003DMG401004586 Solanum tuberosum HOM05D006606 ORTHO05D008429 4.2e-119 431.8 291 66.3
Actinidia28936 Actinidia chinensis HOM05D006606 ORTHO05D008429 5.5e-119 431.4 291 68.0
Gorai.005G080900 Gossypium raimondii HOM05D006606 ORTHO05D008429 9.3e-119 430.6 291 68.0
SalBow6G4530 Salvia bowleyana HOM05D006606 ORTHO05D008429 9.3e-119 430.6 291 68.0
RcHm_v2.0_Chr4g0410061 Rosa chinensis HOM05D006606 ORTHO05D008429 1.2e-118 430.3 291 68.7
Duzib041G0430 Durio zibethinus HOM05D006606 ORTHO05D008429 1.6e-118 429.9 291 67.7
Gohir.A02G065800 Gossypium hirsutum HOM05D006606 ORTHO05D008429 1.6e-118 429.9 291 68.0
MSTRG.21987 Avicennia marina HOM05D006606 ORTHO05D008429 2.1e-118 429.5 291 68.4
Mapoly0040s0092 Marchantia polymorpha HOM05D006606 ORTHO05D008429 2.1e-118 429.5 291 68.7
A06p07610 Brassica napus HOM05D006606 ORTHO05D008429 2.7e-118 429.1 291 67.4
BraA06t23963Z Brassica rapa HOM05D006606 ORTHO05D008429 2.7e-118 429.1 291 67.4
Gohir.D02G071700 Gossypium hirsutum HOM05D006606 ORTHO05D008429 2.7e-118 429.1 291 67.7
Solyc12g098710.2 Solanum lycopersicum HOM05D006606 ORTHO05D008429 2.7e-118 429.1 291 66.0
BolC5t29661H Brassica oleracea HOM05D000246 ORTHO05D005907 3.5e-118 428.7 291 67.4
Rhsim02G0071700 Rhododendron simsii HOM05D006606 ORTHO05D008429 3.5e-118 428.7 289 68.9
Nitab4.5_0000978g0190 Nicotiana tabacum HOM05D006606 ORTHO05D008429 4.6e-118 428.3 291 67.0
CAN.G484.128 Capsicum annuum HOM05D006606 ORTHO05D008429 6.0e-118 427.9 291 67.4
CARHR011050 Cardamine hirsuta HOM05D006606 ORTHO05D008429 6.0e-118 427.9 291 66.3
Nitab4.5_0006519g0030 Nicotiana tabacum HOM05D006606 ORTHO05D008429 6.0e-118 427.9 291 66.7
C05p09200 Brassica napus HOM05D006606 ORTHO05D008429 7.9e-118 427.6 291 67.0
Ciclev10020648m.g Citrus clementina HOM05D006606 ORTHO05D008429 7.9e-118 427.6 291 67.7
Migut.N00458 Erythranthe guttata HOM05D006606 ORTHO05D008429 1.0e-117 427.2 291 68.4
Cfa008709 Carpinus fangiana HOM05D006606 ORTHO05D008429 1.8e-117 426.4 290 68.3
Oeu013395.1 Olea europaea HOM05D006606 ORTHO05D008429 1.8e-117 426.4 291 66.7
QL10p044478 Quercus lobata HOM05D006606 ORTHO05D008429 1.8e-117 426.4 292 68.8
Thhalv10007996m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 3.0e-117 425.6 291 66.3
MD04G1028100 Malus domestica HOM05D006606 ORTHO05D008429 3.0e-117 425.6 291 68.0
Ca_18015_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 5.1e-117 424.9 291 69.4
Pp3c17_7640 Physcomitrium patens HOM05D006606 ORTHO05D008429 5.1e-117 424.9 291 69.1
AL1G21760 Arabidopsis lyrata HOM05D006606 ORTHO05D008429 8.7e-117 424.1 291 65.3
Cpa.g.sc8.304 Carica papaya HOM05D006606 ORTHO05D008429 1.1e-116 423.7 291 65.3
CBR_g17600 Chara braunii HOM05D006606 ORTHO05D008429 2.5e-116 422.5 293 66.9
MELO3C017709.2 Cucumis melo HOM05D006606 ORTHO05D008429 2.5e-116 422.5 292 68.5
PSO017G6954 Papaver somniferum HOM05D006606 ORTHO05D008429 2.5e-116 422.5 293 68.3
Atru.chr3.1730 Acer truncatum HOM05D006606 ORTHO05D008429 3.3e-116 422.2 291 67.4
Carub.0001s1037 Capsella rubella HOM05D006606 ORTHO05D008429 3.3e-116 422.2 291 65.3
TPR.G18107 Trifolium pratense HOM05D006606 ORTHO05D008429 3.3e-116 422.2 290 65.2
AT1G10830 Arabidopsis thaliana HOM05D006606 ORTHO05D008429 4.3e-116 421.8 291 65.3
ClCG07G015730 Citrullus lanatus HOM05D006606 ORTHO05D008429 4.3e-116 421.8 291 68.7
DCAR_023800 Daucus carota HOM05D006606 ORTHO05D008429 4.3e-116 421.8 291 67.0
Prupe.1G177500 Prunus persica HOM05D006606 ORTHO05D008429 4.3e-116 421.8 291 66.7
Oeu007220.2 Olea europaea HOM05D006606 ORTHO05D008429 1.3e-115 420.2 291 66.0
PSO675G4216 Papaver somniferum HOM05D006606 ORTHO05D008429 1.3e-115 420.2 293 67.6
Sed0006939 Sechium edule HOM05D006606 ORTHO05D008429 1.3e-115 420.2 291 69.1
Aa31LG1G4020 Aethionema arabicum HOM05D006606 ORTHO05D008429 2.2e-115 419.5 291 66.0
Nn1g09788 Nelumbo nucifera HOM05D006606 ORTHO05D008429 2.8e-115 419.1 293 68.6
Sp1g09530 Schrenkiella parvula HOM05D006606 ORTHO05D008429 4.8e-115 418.3 291 65.6
unitig_22.g6833 Utricularia gibba HOM05D006606 ORTHO05D008429 6.3e-115 417.9 291 67.0
Medtr3g084950 Medicago truncatula HOM05D006606 ORTHO05D008429 8.2e-115 417.5 290 64.8
TWI09G1191 Tripterygium wilfordii HOM05D006606 ORTHO05D008429 1.4e-114 416.8 291 65.3
Os12g0405200 Oryza sativa ssp. japonica HOM05D006606 ORTHO05D008429 2.4e-114 416.0 291 66.0
Aqoxy2G04062 Aquilegia oxysepala HOM05D006606 ORTHO05D008429 3.1e-114 415.6 293 66.2
GSVIVG01031662001 Vitis vinifera HOM05D006606 ORTHO05D008429 3.1e-114 415.6 290 66.9
Zm00001eb408760 Zea mays HOM05D006606 ORTHO05D008429 3.1e-114 415.6 291 65.3
Sc19g0007700 Simmondsia chinensis HOM05D006606 ORTHO05D008429 4.1e-114 415.2 293 65.5
Ca_16442_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 5.3e-114 414.8 290 64.8
SGA_v2.0_scaffold178G39486 Striga asiatica HOM05D006606 ORTHO05D008429 5.3e-114 414.8 283 68.2
CsaV3_4G003370 Cucumis sativus L. HOM05D006606 ORTHO05D008429 6.9e-114 414.5 291 67.4
HanXRQChr10g0293961 Helianthus annuus HOM05D006606 ORTHO05D008429 9.0e-114 414.1 290 65.2
PGR119G1918 Punica granatum HOM05D006606 ORTHO05D008429 1.5e-113 413.3 294 67.0
THA.LOC104823658 Tarenaya hassleriana HOM05D006606 ORTHO05D008429 2.0e-113 412.9 290 66.6
ATR0561G173 Amborella trichopoda HOM05D006606 ORTHO05D008429 1.3e-112 410.2 287 65.9
Sabra14G0110300 Salix brachista HOM05D006606 ORTHO05D008429 2.2e-112 409.5 337 59.6
Lsat_1_v5_gn_2_48240 Lactuca sativa HOM05D006606 ORTHO05D008429 9.4e-111 404.1 290 63.4
FAN07G1739 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.2e-110 403.7 338 59.2
EL10Ac3g07392 Beta vulgaris HOM05D006606 ORTHO05D008429 1.4e-109 400.2 291 64.9
Peaxi162Scf00378g00631 Petunia axillaris HOM05D006606 ORTHO05D008429 7.4e-108 394.4 291 63.6
Haze_11718 Corylus avellana HOM05D006606 ORTHO05D008429 6.3e-107 391.3 342 57.3
BcaC05g24964 Brassica carinata HOM05D006606 ORTHO05D008429 5.9e-105 384.8 290 62.1
ECA238G2565 Erigeron canadensis HOM05D001656 ORTHO05D003489 1.9e-103 379.8 262 65.3
AUR62018480 Chenopodium quinoa HOM05D006606 ORTHO05D008429 2.5e-103 379.4 253 70.8
Lj3A376T54 Lonicera japonica HOM05D006606 ORTHO05D008429 8.2e-99 364.4 222 73.9
Cre19.g750247 Chlamydomonas reinhardtii HOM05D006606 ORTHO05D008429 5.9e-89 331.6 293 56.3
COL.COLO4_38511 Corchorus olitorius HOM05D006606 ORTHO05D008429 6.3e-83 311.6 360 46.7
HPP92_024552 Vanilla planifolia HOM05D006606 ORTHO05D008429 1.6e-81 307.0 228 66.2
Lj3A357T51 Lonicera japonica HOM05D006606 ORTHO05D008429 6.5e-80 301.6 181 72.4
SEGI_35229 Sequoiadendron giganteum HOM05D006606 ORTHO05D008429 8.8e-77 291.2 214 62.6
Hund24463 Selenicereus undatus HOM05D006606 ORTHO05D008429 2.0e-68 263.5 180 71.1
Sopen12g033460 Solanum pennellii HOM05D006606 ORTHO05D008429 3.4e-68 262.7 184 66.3
Psat5g098600 Pisum sativum HOM05D006606 ORTHO05D008429 2.0e-65 253.4 179 66.5
CDE09G0731 Ceratophyllum demersum HOM05D006606 ORTHO05D008429 1.0e-64 251.1 180 67.2
Manes.01G001200 Manihot esculenta HOM05D006606 ORTHO05D008429 1.0e-64 251.1 182 68.1
TPR.G26571 Trifolium pratense HOM05D006606 ORTHO05D008429 5.2e-61 238.8 291 47.4
Thhalv10000634m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 8.7e-32 141.7 113 58.4
VMungo1383G0479 Vigna mungo HOM05D000517 ORTHO05D000751 5.3e-21 105.9 93 54.8
Thhalv10029367m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 3.7e-14 83.2 67 55.2
Lj3C357T11 Lonicera japonica HOM05D006606 ORTHO05D008429 1.8e-08 64.3 63 46.0
Lj3C376T8 Lonicera japonica HOM05D006606 ORTHO05D008429 1.8e-08 64.3 63 46.0
PSO017G3682 Papaver somniferum HOM05D006606 ORTHO05D008429 2.5e-07 60.5 38 63.2


User provided reference genes

Program Settings