Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO270G0068 Selaginella moellendorffii HOM05D006836 ORTHO05D008691 2.6e-170 602.1 320 100.0
AagrBONN_evm.TU.Sc2ySwM_117.1494 Anthoceros agrestis HOM05D006836 ORTHO05D008691 1.7e-68 263.8 279 50.9
Ca_16339_v3 Cicer arietinum L. HOM05D006836 ORTHO05D008691 3.7e-68 262.7 229 54.1
Actinidia09801 Actinidia chinensis HOM05D006836 ORTHO05D008691 4.8e-68 262.3 288 46.5
GSVIVG01030118001 Vitis vinifera HOM05D006836 ORTHO05D008691 8.2e-68 261.5 221 54.3
Gohir.A07G192900 Gossypium hirsutum HOM05D006836 ORTHO05D008691 2.4e-67 260.0 273 46.5
Gorai.001G223100 Gossypium raimondii HOM05D006836 ORTHO05D008691 4.1e-67 259.2 273 46.2
Manes.13G060700 Manihot esculenta HOM05D006836 ORTHO05D008691 7.0e-67 258.5 224 52.7
Ciclev10015848m.g Citrus clementina HOM05D006836 ORTHO05D008691 1.2e-66 257.7 224 53.1
CANSAT64G2876 Cannabis sativa HOM05D006836 ORTHO05D008691 2.7e-66 256.5 224 53.1
Gohir.D07G199300 Gossypium hirsutum HOM05D006836 ORTHO05D008691 2.7e-66 256.5 313 41.9
Nitab4.5_0004852g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 2.7e-66 256.5 222 52.7
Medtr3g082680 Medicago truncatula HOM05D006836 ORTHO05D008691 4.5e-66 255.8 220 55.0
RcHm_v2.0_Chr2g0155731 Rosa chinensis HOM05D006836 ORTHO05D008691 4.5e-66 255.8 221 52.5
vmacro12068 Vaccinium macrocarpon HOM05D006836 ORTHO05D008691 4.5e-66 255.8 280 46.8
arahy.Tifrunner.gnm1.ann1.GSTV0Y Arachis hypogaea HOM05D006836 ORTHO05D008691 5.9e-66 255.4 278 48.9
Eucgr.K01397 Eucalyptus grandis HOM05D006836 ORTHO05D008691 5.9e-66 255.4 306 43.8
MD09G1129600 Malus domestica HOM05D006836 ORTHO05D008691 7.7e-66 255.0 283 45.6
TPR.G16170 Trifolium pratense HOM05D006836 ORTHO05D008691 7.7e-66 255.0 226 53.1
Os08g0345400 Oryza sativa ssp. japonica HOM05D006836 ORTHO05D008691 1.0e-65 254.6 220 51.8
Lj6g0007987 Lotus japonicus HOM05D006836 ORTHO05D008691 1.3e-65 254.2 231 50.6
arahy.Tifrunner.gnm1.ann1.M09JG2 Arachis hypogaea HOM05D006836 ORTHO05D008691 1.7e-65 253.8 283 49.1
Pp3c23_16310 Physcomitrium patens HOM05D006836 ORTHO05D008691 1.7e-65 253.8 230 51.7
Rhsim06G0178100 Rhododendron simsii HOM05D006836 ORTHO05D008691 1.7e-65 253.8 285 46.3
Zm00001eb176810 Zea mays HOM05D006836 ORTHO05D008691 2.2e-65 253.4 298 43.6
CiPaw.03G283000 Carya illinoinensis HOM05D006836 ORTHO05D008691 2.9e-65 253.1 224 50.9
Psat5g104760 Pisum sativum HOM05D006836 ORTHO05D008691 2.9e-65 253.1 226 52.2
VMungo0647G0281 Vigna mungo HOM05D006836 ORTHO05D008691 6.5e-65 251.9 231 48.9
Solyc07g045300.4 Solanum lycopersicum HOM05D006836 ORTHO05D008691 8.5e-65 251.5 222 52.3
Dinv21313 Davidia involucrata HOM05D006836 ORTHO05D008691 2.5e-64 250.0 288 43.8
QL04p067653 Quercus lobata HOM05D006836 ORTHO05D008691 2.5e-64 250.0 221 51.6
PGSC0003DMG400017381 Solanum tuberosum HOM05D006836 ORTHO05D008691 2.5e-64 250.0 222 51.8
Aqoxy1G03080 Aquilegia oxysepala HOM05D006836 ORTHO05D008691 3.2e-64 249.6 224 50.9
Duzib133G0147 Durio zibethinus HOM05D006836 ORTHO05D008691 3.2e-64 249.6 270 45.2
Glyma.13G010200 Glycine max HOM05D006836 ORTHO05D008691 3.2e-64 249.6 224 50.0
MBI14_g24036_MAGBIO Magnolia biondii HOM05D006836 ORTHO05D008691 3.2e-64 249.6 319 41.4
Phvul.L001691 Phaseolus vulgaris HOM05D006836 ORTHO05D008691 3.2e-64 249.6 224 50.4
THA.LOC104808842 Tarenaya hassleriana HOM05D006836 ORTHO05D008691 3.2e-64 249.6 221 51.1
TAR629G0496 Trochodendron aralioides HOM05D006836 ORTHO05D008691 3.2e-64 249.6 313 42.2
Migut.M00056 Erythranthe guttata HOM05D006836 ORTHO05D008691 5.5e-64 248.8 219 53.4
ClCG02G009110 Citrullus lanatus HOM05D006836 ORTHO05D008691 7.2e-64 248.4 222 52.3
Glyma.20G060000 Glycine max HOM05D006836 ORTHO05D008691 7.2e-64 248.4 221 50.7
Sopen07g023830 Solanum pennellii HOM05D006836 ORTHO05D008691 7.2e-64 248.4 222 51.4
CSS0020520 Camellia sinensis var. sinensis HOM05D006836 ORTHO05D008691 1.2e-63 247.7 283 45.2
Potri.014G169200 Populus trichocarpa HOM05D006836 ORTHO05D008691 1.2e-63 247.7 282 44.7
AUR62014994 Chenopodium quinoa HOM05D006836 ORTHO05D008691 1.6e-63 247.3 307 42.7
PSO541G5262 Papaver somniferum HOM05D006836 ORTHO05D008691 1.6e-63 247.3 222 52.7
BcaB06g26781 Brassica carinata HOM05D006836 ORTHO05D008691 3.6e-63 246.1 224 50.9
Mapoly0098s0007 Marchantia polymorpha HOM05D006836 ORTHO05D008691 8.0e-63 245.0 228 51.8
Cfa014210 Carpinus fangiana HOM05D006836 ORTHO05D008691 1.0e-62 244.6 234 49.1
Lalb_Chr10g0094621 Lupinus albus HOM05D006836 ORTHO05D008691 1.0e-62 244.6 270 44.8
PSO675G1370 Papaver somniferum HOM05D006836 ORTHO05D008691 2.3e-62 243.4 222 51.4
PGR031G1777 Punica granatum HOM05D006836 ORTHO05D008691 2.3e-62 243.4 222 50.0
Thecc.01G198300 Theobroma cacao HOM05D006836 ORTHO05D008691 3.0e-62 243.0 275 43.3
CARHR102220 Cardamine hirsuta HOM05D006836 ORTHO05D008691 4.0e-62 242.7 221 50.2
Nn1g07540 Nelumbo nucifera HOM05D006836 ORTHO05D008691 4.0e-62 242.7 224 49.1
Oeu037218.2 Olea europaea HOM05D000879 ORTHO05D008691 4.0e-62 242.7 228 49.1
DCAR_012739 Daucus carota HOM05D006836 ORTHO05D008691 5.2e-62 242.3 284 43.3
Carub.0003s2604 Capsella rubella HOM05D006836 ORTHO05D008691 6.8e-62 241.9 224 50.0
A07p06710 Brassica napus HOM05D006836 ORTHO05D008691 8.8e-62 241.5 224 50.9
BraA07t28465Z Brassica rapa HOM05D006836 ORTHO05D008691 8.8e-62 241.5 224 50.4
BcaC06g35865 Brassica carinata HOM05D006836 ORTHO05D008691 1.5e-61 240.7 224 50.0
C07p10290 Brassica napus HOM05D006836 ORTHO05D008691 1.5e-61 240.7 224 50.0
BolC7t41479H Brassica oleracea HOM05D006836 ORTHO05D008691 1.5e-61 240.7 224 50.0
Sed0023251 Sechium edule HOM05D006836 ORTHO05D008691 1.5e-61 240.7 219 50.2
SEGI_40154 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 1.5e-61 240.7 225 49.8
Hund15463 Selenicereus undatus HOM05D006836 ORTHO05D008691 2.0e-61 240.4 226 49.6
EL10Ac9g22661 Beta vulgaris HOM05D006836 ORTHO05D008691 2.6e-61 240.0 262 46.2
Thhalv10002607m.g Eutrema salsugineum HOM05D006836 ORTHO05D008691 4.4e-61 239.2 295 42.4
Sp3g23200 Schrenkiella parvula HOM05D006836 ORTHO05D008691 5.7e-61 238.8 224 49.6
TWI75G1319 Tripterygium wilfordii HOM05D006836 ORTHO05D008691 5.7e-61 238.8 224 48.7
AL3G42030 Arabidopsis lyrata HOM05D006836 ORTHO05D008691 7.5e-61 238.4 229 48.5
HanXRQChr11g0329431 Helianthus annuus HOM05D006836 ORTHO05D008691 1.7e-60 237.3 209 53.6
MSTRG.14912 Avicennia marina HOM05D006836 ORTHO05D008691 2.8e-60 236.5 221 50.7
ATR0751G245 Amborella trichopoda HOM05D006836 ORTHO05D008691 1.4e-59 234.2 205 52.7
Lsat_1_v5_gn_7_97361 Lactuca sativa HOM05D006836 ORTHO05D008691 1.8e-59 233.8 212 52.8
SGA_v2.0_scaffold73G24492 Striga asiatica HOM05D006836 ORTHO05D008691 2.4e-59 233.4 221 48.4
Ah.01g002500 Amaranthus hybridus HOM05D006836 ORTHO05D008691 1.6e-58 230.7 208 52.9
Cc00_g01020 Coffea canephora HOM05D006836 ORTHO05D008691 2.7e-58 229.9 221 49.8
FvH4_6g40480 Fragaria vesca HOM05D006836 ORTHO05D008691 1.7e-57 227.3 192 52.6
Nitab4.5_0005354g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 2.9e-57 226.5 225 48.0
AUR62029127 Chenopodium quinoa HOM05D006836 ORTHO05D008691 3.8e-57 226.1 208 51.9
ECA236G0162 Erigeron canadensis HOM05D006836 ORTHO05D008691 8.6e-57 224.9 198 53.0
Peaxi162Scf00612g00142 Petunia axillaris HOM05D006836 ORTHO05D008691 4.2e-56 222.6 220 46.8
Lj8A137G50 Lonicera japonica HOM05D006836 ORTHO05D008691 5.5e-56 222.2 192 53.1
Haze_12601 Corylus avellana HOM05D006836 ORTHO05D008691 1.6e-55 220.7 264 43.2
COL.COLO4_19642 Corchorus olitorius HOM05D006836 ORTHO05D008691 1.1e-51 208.0 299 38.1
CsaV3_6G009720 Cucumis sativus L. HOM05D006836 ORTHO05D008691 7.0e-51 205.3 192 48.4
unitig_62.g23534 Utricularia gibba HOM05D000211 ORTHO05D002682 3.5e-50 203.0 219 44.3
FAN10G4054 Fragaria x ananassa HOM05D006836 ORTHO05D008691 2.3e-49 200.3 245 42.0
FAN14G0130 Fragaria x ananassa HOM05D006836 ORTHO05D008691 2.3e-49 200.3 245 42.0
Sabra14G0129000 Salix brachista HOM05D006836 ORTHO05D008691 6.6e-49 198.7 361 33.8
CDE10G1136 Ceratophyllum demersum HOM05D006836 ORTHO05D008691 3.4e-45 186.4 174 52.3
Sc21g0000470 Simmondsia chinensis HOM05D006836 ORTHO05D008691 1.3e-44 184.5 251 43.8
AT2G04360 Arabidopsis thaliana HOM05D006836 ORTHO05D008691 2.2e-44 183.7 175 46.9
Cre05.g234750 Chlamydomonas reinhardtii HOM05D006836 ORTHO05D008691 8.3e-44 181.8 225 43.6
MELO3C025942.2 Cucumis melo HOM05D006836 ORTHO05D008691 9.2e-43 178.3 169 47.9
Aa31sc202G50 Aethionema arabicum HOM05D006836 ORTHO05D008691 1.6e-42 177.6 191 46.1
Cpa.g.sc136.39 Carica papaya HOM05D006836 ORTHO05D008691 1.3e-41 174.5 217 41.9
Prupe.3G195700 Prunus persica HOM05D006836 ORTHO05D008691 8.6e-41 171.8 135 56.3
FAN02G3194 Fragaria x ananassa HOM05D006836 ORTHO05D008691 1.2e-39 167.9 129 56.6
Haze_12612 Corylus avellana HOM05D006836 ORTHO05D008691 6.4e-36 155.6 160 47.5
CBR_g3513 Chara braunii HOM05D006836 ORTHO05D000407 5.4e-35 152.5 191 41.4
MD07G1016400 Malus domestica HOM05D006836 ORTHO05D008691 3.5e-34 149.8 232 38.4
MD17G1118400 Malus domestica HOM05D006836 ORTHO05D008691 3.5e-34 149.8 232 38.4
HPP92_003030 Vanilla planifolia HOM05D006836 ORTHO05D008691 4.6e-26 122.9 94 57.4
SEGI_21977 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 6.0e-18 95.9 78 52.6
PRCOL_00003549 Prasinoderma coloniale HOM05D006836 ORTHO05D008691 7.8e-18 95.5 165 38.2
FAN05G5431 Fragaria x ananassa HOM05D006836 ORTHO05D008691 1.7e-17 94.4 103 45.6
HPP92_003031 Vanilla planifolia HOM05D006836 ORTHO05D008691 3.9e-17 93.2 83 53.0
FAN09G0369 Fragaria x ananassa HOM05D006836 ORTHO05D008691 6.6e-17 92.4 103 45.6
MCO08G347 Micromonas commoda HOM05D006836 ORTHO05D008691 1.3e-12 78.2 214 29.9
arahy.Tifrunner.gnm1.ann1.FY93PX Arachis hypogaea HOM05D006836 ORTHO05D000230 4.8e-07 59.7 42 59.5


User provided reference genes

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