Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO269G0037 Selaginella moellendorffii HOM05D004942 ORTHO05D005687 0.0e+00 2698.7 1382 100.0
SMO084G0001 Selaginella moellendorffii HOM05D004942 ORTHO05D005687 7.6e-78 297.0 187 86.6
SMO269G0039 Selaginella moellendorffii HOM05D004942 ORTHO05D005687 1.2e-51 209.9 125 84.0
SMO186G0003 Selaginella moellendorffii HOM05D020300 ORTHO05D005687 9.8e-41 173.7 136 69.9
GSVIVG01012245001 Vitis vinifera HOM05D004942 ORTHO05D005687 2.8e-35 155.6 1154 23.0
Prupe.1G290000 Prunus persica HOM05D004942 ORTHO05D005687 3.6e-35 155.2 1230 21.4
Carub.0001s2467 Capsella rubella HOM05D004942 ORTHO05D005687 1.4e-31 143.3 1134 22.4
Migut.L01173 Erythranthe guttata HOM05D004942 ORTHO05D005687 7.0e-31 141.0 1019 23.1
CiPaw.06G093500 Carya illinoinensis HOM05D004942 ORTHO05D005687 1.2e-30 140.2 1208 21.4
Medtr8g066290 Medicago truncatula HOM05D004942 ORTHO05D005687 1.6e-30 139.8 1195 21.2
SGA_v2.0_scaffold16G07813 Striga asiatica HOM05D004942 ORTHO05D005687 2.9e-29 135.6 1092 23.2
SMO269G0038 Selaginella moellendorffii HOM05D004942 ORTHO05D005687 3.8e-29 135.2 69 91.3
Cc11_g11760 Coffea canephora HOM05D004942 ORTHO05D005687 5.0e-29 134.8 1156 22.3
Psat4g122040 Pisum sativum HOM05D004942 ORTHO05D005687 6.6e-29 134.4 1112 19.3
Os09g0101800 Oryza sativa ssp. japonica HOM05D004942 ORTHO05D005687 7.3e-28 131.0 1084 22.7
ECA234G0983 Erigeron canadensis HOM05D004942 ORTHO05D005687 9.5e-28 130.6 1133 21.4
Psat1g014920 Pisum sativum HOM05D004942 ORTHO05D005687 8.0e-27 127.5 1070 20.6
THA.LOC104822000 Tarenaya hassleriana HOM05D004942 ORTHO05D005687 1.8e-26 126.3 1183 22.0
Mapoly0001s0391 Marchantia polymorpha HOM05D004942 ORTHO05D005687 3.0e-26 125.6 419 27.4
Zm00001eb095700 Zea mays HOM05D004942 ORTHO05D005687 4.0e-26 125.2 1146 22.8
SalBow2G1731 Salvia bowleyana HOM05D004942 ORTHO05D005687 5.2e-26 124.8 1138 22.1
Manes.01G026200 Manihot esculenta HOM05D004942 ORTHO05D005687 6.8e-26 124.4 1207 21.2
AagrBONN_evm.TU.Sc2ySwM_362.1676 Anthoceros agrestis HOM05D004942 ORTHO05D005687 8.9e-26 124.0 363 25.9
Peaxi162Scf00175g00531 Petunia axillaris HOM05D004942 ORTHO05D005687 8.9e-26 124.0 1130 22.6
AL1G39420 Arabidopsis lyrata HOM05D004942 ORTHO05D005687 2.0e-25 122.9 1187 20.5
HanXRQChr17g0568411 Helianthus annuus HOM05D004942 ORTHO05D005687 2.6e-25 122.5 1034 22.0
Lj4g0014066 Lotus japonicus HOM05D004942 ORTHO05D005687 4.4e-25 121.7 1158 21.1
Sp1g22360 Schrenkiella parvula HOM05D004942 ORTHO05D005687 1.7e-24 119.8 1176 20.6
Migut.A01205 Erythranthe guttata HOM05D004942 ORTHO05D005687 2.2e-24 119.4 1040 21.8
CARHR025590 Cardamine hirsuta HOM05D004942 ORTHO05D005687 3.7e-24 118.6 1207 21.1
MELO3C012244.2 Cucumis melo HOM05D004942 ORTHO05D005687 3.7e-24 118.6 1214 20.3
Migut.A01186 Erythranthe guttata HOM05D004942 ORTHO05D005687 1.4e-23 116.7 1002 22.1
A09p39800 Brassica napus HOM05D004942 ORTHO05D005687 1.9e-23 116.3 1241 20.1
FAN07G2875 Fragaria x ananassa HOM05D004942 ORTHO05D005687 1.9e-23 116.3 325 29.2
MD16G1059100 Malus domestica HOM05D004942 ORTHO05D005687 1.9e-23 116.3 129 45.0
Gorai.008G175800 Gossypium raimondii HOM05D004942 ORTHO05D005687 2.4e-23 115.9 121 46.3
TPR.G3371 Trifolium pratense HOM05D004942 ORTHO05D005687 2.4e-23 115.9 381 23.1
Aqoxy4G01534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 4.1e-23 115.2 1274 21.8
RcHm_v2.0_Chr4g0437911 Rosa chinensis HOM05D004942 ORTHO05D005687 7.0e-23 114.4 225 35.1
COL.COLO4_27850 Corchorus olitorius HOM05D004942 ORTHO05D005687 9.2e-23 114.0 1047 21.1
BcaC05g26421 Brassica carinata HOM05D004942 ORTHO05D005687 1.2e-22 113.6 1244 19.5
ATR0827G101 Amborella trichopoda HOM05D004942 ORTHO05D005687 2.0e-22 112.8 392 26.3
Cpa.g.sc1669.1 Carica papaya HOM05D004942 ORTHO05D005687 2.0e-22 112.8 376 25.8
AT1G26330 Arabidopsis thaliana HOM05D004942 ORTHO05D005687 2.7e-22 112.5 174 39.7
CANSAT64G2200 Cannabis sativa HOM05D004942 ORTHO05D005687 2.7e-22 112.5 1185 20.3
Duzib251G0048 Durio zibethinus HOM05D004942 ORTHO05D005687 2.7e-22 112.5 127 43.3
FAN22G2425 Fragaria x ananassa HOM05D004942 ORTHO05D005687 2.7e-22 112.5 221 34.8
VMungo0251G2230 Vigna mungo HOM05D004942 ORTHO05D005687 2.7e-22 112.5 1121 21.0
Thecc.02G326800 Theobroma cacao HOM05D004942 ORTHO05D005687 3.5e-22 112.1 1266 20.9
Thhalv10006590m.g Eutrema salsugineum HOM05D004942 ORTHO05D005687 4.6e-22 111.7 1179 19.8
FvH4_4g29660 Fragaria vesca HOM05D004942 ORTHO05D005687 6.0e-22 111.3 312 29.8
FAN12G1725 Fragaria x ananassa HOM05D004942 ORTHO05D005687 6.0e-22 111.3 312 29.8
Nn3g17507 Nelumbo nucifera HOM05D004942 ORTHO05D005687 6.0e-22 111.3 148 41.2
TAR629G1720 Trochodendron aralioides HOM05D004942 ORTHO05D005687 1.7e-21 109.8 126 43.7
PGR031G3471 Punica granatum HOM05D004942 ORTHO05D005687 3.0e-21 109.0 127 43.3
C05p24600 Brassica napus HOM05D004942 ORTHO05D005687 3.9e-21 108.6 1239 20.1
BolC5t31196H Brassica oleracea HOM05D004942 ORTHO05D005687 3.9e-21 108.6 1239 20.1
PSO478G0521 Papaver somniferum HOM05D004942 ORTHO05D005687 3.9e-21 108.6 1328 21.0
ClCG05G022730 Citrullus lanatus HOM05D004942 ORTHO05D005687 8.6e-21 107.5 1232 20.7
MBI16_g37883_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 8.6e-21 107.5 368 25.3
BraA09t39480Z Brassica rapa HOM05D004942 ORTHO05D005687 1.5e-20 106.7 1255 19.9
Haze_11879 Corylus avellana HOM05D004942 ORTHO05D005687 1.5e-20 106.7 179 36.3
SMO269G0044 Selaginella moellendorffii HOM05D001787 ORTHO05D005687 1.9e-20 106.3 73 76.7
PSO017G2640 Papaver somniferum HOM05D004942 ORTHO05D005687 3.3e-20 105.5 1331 19.8
Hund25161 Selenicereus undatus HOM05D004942 ORTHO05D005687 4.3e-20 105.1 153 41.2
AUR62003077 Chenopodium quinoa HOM05D004942 ORTHO05D005687 5.6e-20 104.8 150 39.3
Gohir.A12G159850 Gossypium hirsutum HOM05D004942 ORTHO05D005687 5.6e-20 104.8 215 34.0
Solyc05g012060.4 Solanum lycopersicum HOM05D004942 ORTHO05D005687 5.6e-20 104.8 152 40.1
Cfa008858 Carpinus fangiana HOM05D004942 ORTHO05D005687 7.3e-20 104.4 179 36.9
Ca_22664_v3 Cicer arietinum L. HOM05D004942 ORTHO05D005687 7.3e-20 104.4 123 43.9
Sopen05g006850 Solanum pennellii HOM05D004942 ORTHO05D005687 7.3e-20 104.4 152 39.5
HPP92_000888 Vanilla planifolia HOM05D004942 ORTHO05D005687 7.3e-20 104.4 161 36.0
BcaC05g26635 Brassica carinata HOM05D004942 ORTHO05D005687 9.5e-20 104.0 157 35.7
Atru.chr11.1595 Acer truncatum HOM05D004942 ORTHO05D005687 1.6e-19 103.2 224 32.1
Aqoxy3G00534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 1.6e-19 103.2 1272 21.1
AUR62007894 Chenopodium quinoa HOM05D004942 ORTHO05D005687 2.8e-19 102.4 155 38.7
Nitab4.5_0000027g0020 Nicotiana tabacum HOM05D004942 ORTHO05D005687 3.6e-19 102.1 149 39.6
Actinidia28653 Actinidia chinensis HOM05D004942 ORTHO05D005687 4.7e-19 101.7 183 35.5
CAN.G707.24 Capsicum annuum HOM05D004942 ORTHO05D005687 6.2e-19 101.3 141 41.8
TPR.G31934 Trifolium pratense HOM05D004942 ORTHO05D005687 6.2e-19 101.3 121 43.8
Gohir.A12G159900 Gossypium hirsutum HOM05D004942 ORTHO05D005687 8.0e-19 100.9 375 25.9
SEGI_21482 Sequoiadendron giganteum HOM05D004942 ORTHO05D005687 1.1e-18 100.5 168 35.1
Actinidia27212 Actinidia chinensis HOM05D004942 ORTHO05D005687 1.4e-18 100.1 225 31.1
unitig_26.g10284 Utricularia gibba HOM05D004942 ORTHO05D005687 1.4e-18 100.1 190 35.3
CsaV3_5G034290 Cucumis sativus L. HOM05D004942 ORTHO05D005687 2.3e-18 99.4 215 33.5
QL03p073561 Quercus lobata HOM05D004942 ORTHO05D005687 2.3e-18 99.4 217 31.8
TWI79G0892 Tripterygium wilfordii HOM05D004942 ORTHO05D005687 2.3e-18 99.4 1113 20.2
Sed0022979 Sechium edule HOM05D004942 ORTHO05D005687 3.1e-18 99.0 151 38.4
Ah.03g138750 Amaranthus hybridus HOM05D004942 ORTHO05D005687 6.8e-18 97.8 179 34.1
Rhsim09G0125700 Rhododendron simsii HOM05D004942 ORTHO05D005687 1.2e-17 97.1 397 27.2
Gohir.D12G163150 Gossypium hirsutum HOM05D004942 ORTHO05D005687 1.5e-17 96.7 85 48.2
Lalb_Chr09g0334721 Lupinus albus HOM05D004942 ORTHO05D005687 1.5e-17 96.7 144 36.1
Phvul.003G282800 Phaseolus vulgaris HOM05D004942 ORTHO05D005687 1.5e-17 96.7 145 38.6
EL10Ac6g15023 Beta vulgaris HOM05D004942 ORTHO05D005687 2.0e-17 96.3 151 38.4
SMO116G0210 Selaginella moellendorffii HOM05D001787 ORTHO05D005687 2.0e-17 96.3 75 68.0
Sc04g0007460 Simmondsia chinensis HOM05D004942 ORTHO05D005687 2.0e-17 96.3 218 33.0
Glyma.16G091700 Glycine max HOM05D004942 ORTHO05D005687 1.3e-16 93.6 248 31.5
Nitab4.5_0003545g0010 Nicotiana tabacum HOM05D004942 ORTHO05D005687 1.7e-16 93.2 1147 20.3
TPR.G31932 Trifolium pratense HOM05D004942 ORTHO05D005687 1.7e-16 93.2 367 22.3
Ciclev10033741m.g Citrus clementina HOM05D004942 ORTHO05D005687 2.9e-16 92.4 1200 20.5
Potri.008G097700 Populus trichocarpa HOM05D004942 ORTHO05D005687 3.7e-16 92.0 221 34.8
MSTRG.7735 Avicennia marina HOM05D004942 ORTHO05D005687 1.9e-15 89.7 94 44.7
MBI16_g47660_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 1.9e-15 89.7 346 25.7
Oeu020362.1 Olea europaea HOM05D004942 ORTHO05D005687 1.9e-15 89.7 247 29.6
vmacro10440 Vaccinium macrocarpon HOM05D004942 ORTHO05D005687 9.2e-15 87.4 405 23.0
Gorai.012G127400 Gossypium raimondii HOM05D004942 ORTHO05D005687 1.2e-14 87.0 92 44.6
Hma1.2p1_2519F.1_g323790 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 1.6e-14 86.7 1167 20.9
vmacro10441 Vaccinium macrocarpon HOM05D004942 ORTHO05D005687 3.5e-14 85.5 246 29.7
Lsat_1_v5_gn_4_11720 Lactuca sativa HOM05D004942 ORTHO05D005687 1.0e-13 84.0 358 22.3
TAR629G1003 Trochodendron aralioides HOM05D004942 ORTHO05D005687 1.7e-13 83.2 239 26.8
Atru.chr11.1596 Acer truncatum HOM05D004942 ORTHO05D005687 2.3e-13 82.8 245 27.8
Lj3A1029T37 Lonicera japonica HOM05D004942 ORTHO05D005687 2.3e-13 82.8 82 47.6
Gohir.D12G163200 Gossypium hirsutum HOM05D004942 ORTHO05D005687 3.9e-13 82.0 297 24.6
Aa31LG7G8720 Aethionema arabicum HOM05D004942 ORTHO05D005687 4.3e-12 78.6 486 22.8
DCAR_023750 Daucus carota HOM05D004942 ORTHO05D005687 3.6e-11 75.5 69 49.3
Sabra08G0073900 Salix brachista HOM05D004942 ORTHO05D005687 3.6e-11 75.5 268 28.0
Hma1.2p1_0566F.1_g179990 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 1.8e-10 73.2 188 29.8
MCO07G070 Micromonas commoda HOM05D004942 ORTHO05D005687 2.0e-09 69.7 117 36.8
SEGI_38362 Sequoiadendron giganteum HOM05D004942 ORTHO05D005687 3.5e-06 58.9 59 42.4


User provided reference genes

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