Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO269G0024 Selaginella moellendorffii HOM05D007351 ORTHO05D009386 1.4e-92 342.8 163 100.0
Mapoly0036s0071 Marchantia polymorpha HOM05D007351 ORTHO05D009386 6.9e-63 244.2 164 68.9
Peaxi162Scf00251g01128 Petunia axillaris HOM05D007351 ORTHO05D009386 1.7e-61 239.6 154 68.8
MBI04_g00950_MAGBIO Magnolia biondii HOM05D007351 ORTHO05D009386 2.9e-61 238.8 163 66.9
PSO017G1621 Papaver somniferum HOM05D007351 ORTHO05D009386 2.9e-61 238.8 163 68.7
PSO170G0157 Papaver somniferum HOM05D007351 ORTHO05D009386 3.8e-61 238.4 163 68.1
Eucgr.C01805 Eucalyptus grandis HOM05D007351 ORTHO05D009386 5.0e-61 238.0 154 70.8
Hma1.2p1_0000F.1_g000940 Hydrangea macrophylla HOM05D007351 ORTHO05D009386 8.5e-61 237.3 163 68.1
TAR625G1337 Trochodendron aralioides HOM05D007351 ORTHO05D009386 8.5e-61 237.3 163 66.9
CSS0046405 Camellia sinensis var. sinensis HOM05D007351 ORTHO05D009386 1.1e-60 236.9 163 67.5
Lj8A616G46 Lonicera japonica HOM05D007351 ORTHO05D009386 1.1e-60 236.9 163 66.9
Nn2g11909 Nelumbo nucifera HOM05D007351 ORTHO05D009386 1.1e-60 236.9 163 66.9
MD08G1141900 Malus domestica HOM05D007351 ORTHO05D009386 1.9e-60 236.1 163 66.9
Prupe.1G471900 Prunus persica HOM05D007351 ORTHO05D009386 1.9e-60 236.1 163 67.5
Thecc.09G147600 Theobroma cacao HOM05D007351 ORTHO05D009386 3.2e-60 235.3 163 66.9
CiPaw.08G014100 Carya illinoinensis HOM05D007351 ORTHO05D009386 4.2e-60 235.0 154 69.5
RcHm_v2.0_Chr6g0298791 Rosa chinensis HOM05D007351 ORTHO05D009386 4.2e-60 235.0 163 66.9
Solyc08g067430.4 Solanum lycopersicum HOM05D007351 ORTHO05D009386 4.2e-60 235.0 154 67.5
SEGI_27006 Sequoiadendron giganteum HOM05D007351 ORTHO05D009386 5.5e-60 234.6 163 67.5
FvH4_2g29770 Fragaria vesca HOM05D007351 ORTHO05D009386 7.2e-60 234.2 163 66.3
FAN24G0983 Fragaria x ananassa HOM05D007351 ORTHO05D009386 7.2e-60 234.2 163 66.3
FAN27G2935 Fragaria x ananassa HOM05D007351 ORTHO05D009386 7.2e-60 234.2 163 66.3
COL.COLO4_24001 Corchorus olitorius HOM05D007351 ORTHO05D009386 9.4e-60 233.8 163 66.3
Potri.006G249000 Populus trichocarpa HOM05D007351 ORTHO05D009386 9.4e-60 233.8 163 68.1
Sabra06G0194800 Salix brachista HOM05D007351 ORTHO05D009386 9.4e-60 233.8 163 68.1
Actinidia15698 Actinidia chinensis HOM05D007351 ORTHO05D009386 1.2e-59 233.4 163 66.3
Migut.A00300 Erythranthe guttata HOM05D007351 ORTHO05D009386 1.2e-59 233.4 163 65.0
PGSC0003DMG400007382 Solanum tuberosum HOM05D007351 ORTHO05D009386 1.2e-59 233.4 154 66.9
Manes.16G118400 Manihot esculenta HOM05D007351 ORTHO05D009386 1.6e-59 233.0 163 65.0
Nitab4.5_0000508g0220 Nicotiana tabacum HOM05D007351 ORTHO05D009386 2.1e-59 232.6 163 65.0
unitig_32.g11667 Utricularia gibba HOM05D007351 ORTHO05D009386 2.1e-59 232.6 163 65.0
ATR0680G179 Amborella trichopoda HOM05D007351 ORTHO05D009386 2.7e-59 232.3 162 67.3
BcaB06g28079 Brassica carinata HOM05D007351 ORTHO05D009386 2.7e-59 232.3 154 68.8
BcaC02g08337 Brassica carinata HOM05D007351 ORTHO05D009386 2.7e-59 232.3 154 68.8
A04p19820 Brassica napus HOM05D007351 ORTHO05D009386 2.7e-59 232.3 154 68.8
C04p55560 Brassica napus HOM05D007351 ORTHO05D009386 2.7e-59 232.3 154 68.8
BolC4t27080H Brassica oleracea HOM05D007351 ORTHO05D009386 2.7e-59 232.3 154 68.8
BraA04t17570Z Brassica rapa HOM05D007351 ORTHO05D009386 2.7e-59 232.3 154 68.8
FAN15G3188 Fragaria x ananassa HOM05D007351 ORTHO05D009386 2.7e-59 232.3 163 66.3
AT2G25605 Arabidopsis thaliana HOM05D007351 ORTHO05D009386 3.6e-59 231.9 154 68.8
MSTRG.11754 Avicennia marina HOM05D007351 ORTHO05D009386 3.6e-59 231.9 163 64.4
Gohir.A08G090000 Gossypium hirsutum HOM05D007351 ORTHO05D009386 3.6e-59 231.9 163 65.6
Lsat_1_v5_gn_6_21681 Lactuca sativa HOM05D007351 ORTHO05D009386 3.6e-59 231.9 163 65.6
Gorai.004G110800 Gossypium raimondii HOM05D007351 ORTHO05D009386 4.7e-59 231.5 163 66.3
EL10Ac2g02569 Beta vulgaris HOM05D007351 ORTHO05D009386 6.1e-59 231.1 158 65.2
TWI34G1290 Tripterygium wilfordii HOM05D007351 ORTHO05D009386 7.9e-59 230.7 163 66.9
CARHR115710 Cardamine hirsuta HOM05D007351 ORTHO05D009386 1.0e-58 230.3 154 67.5
Thhalv10000330m.g Eutrema salsugineum HOM05D007351 ORTHO05D009386 1.0e-58 230.3 154 67.5
Sc06g0000580 Simmondsia chinensis HOM05D007351 ORTHO05D009386 1.4e-58 229.9 163 64.4
Atru.chr7.2359 Acer truncatum HOM05D007351 ORTHO05D009386 1.8e-58 229.6 153 68.6
Carub.0004s0533 Capsella rubella HOM05D007351 ORTHO05D009386 1.8e-58 229.6 154 67.5
ECA233G0102 Erigeron canadensis HOM05D007351 ORTHO05D009386 1.8e-58 229.6 163 63.8
MELO3C003678.2 Cucumis melo HOM05D007351 ORTHO05D009386 3.0e-58 228.8 163 64.4
Cpa.g.sc91.32 Carica papaya HOM05D007351 ORTHO05D009386 3.9e-58 228.4 171 64.3
Cc11_g01660 Coffea canephora HOM05D007351 ORTHO05D009386 3.9e-58 228.4 154 66.9
Ca_15711_v3 Cicer arietinum L. HOM05D007351 ORTHO05D009386 5.1e-58 228.0 152 68.4
HanXRQChr13g0402411 Helianthus annuus HOM05D007351 ORTHO05D009386 6.7e-58 227.6 163 65.0
Medtr3g107860 Medicago truncatula HOM05D007351 ORTHO05D009386 6.7e-58 227.6 152 67.8
Sed0005695 Sechium edule HOM05D007351 ORTHO05D009386 8.8e-58 227.3 163 64.4
arahy.Tifrunner.gnm1.ann1.C4YKET Arachis hypogaea HOM05D007351 ORTHO05D009386 1.1e-57 226.9 152 67.1
Ciclev10009550m.g Citrus clementina HOM05D007351 ORTHO05D009386 1.5e-57 226.5 163 64.4
GSVIVG01035772001 Vitis vinifera HOM05D007351 ORTHO05D009386 1.5e-57 226.5 163 64.4
AL4G17070 Arabidopsis lyrata HOM05D007351 ORTHO05D009386 2.0e-57 226.1 154 66.9
Glyma.06G071600 Glycine max HOM05D007351 ORTHO05D009386 2.6e-57 225.7 152 66.4
TPR.G27335 Trifolium pratense HOM05D007351 ORTHO05D009386 2.6e-57 225.7 152 67.1
AUR62032351 Chenopodium quinoa HOM05D007351 ORTHO05D009386 3.3e-57 225.3 165 64.2
Psat5g027160 Pisum sativum HOM05D007351 ORTHO05D009386 4.4e-57 224.9 152 67.1
SGA_v2.0_scaffold448G51771 Striga asiatica HOM05D007351 ORTHO05D009386 4.4e-57 224.9 167 62.3
Nitab4.5_0002339g0070 Nicotiana tabacum HOM05D007351 ORTHO05D009386 9.7e-57 223.8 166 63.3
THA.LOC104804500 Tarenaya hassleriana HOM05D007351 ORTHO05D009386 9.7e-57 223.8 163 64.4
Lalb_Chr23g0268831 Lupinus albus HOM05D007351 ORTHO05D009386 1.3e-56 223.4 152 67.1
Os05g0574700 Oryza sativa ssp. japonica HOM05D007351 ORTHO05D009386 1.3e-56 223.4 164 65.2
Sopen08g021360 Solanum pennellii HOM05D007351 ORTHO05D009386 1.3e-56 223.4 154 64.9
Aa31sc586G10 Aethionema arabicum HOM05D007351 ORTHO05D009386 2.8e-56 222.2 154 64.3
Glyma.04G069700 Glycine max HOM05D007351 ORTHO05D009386 2.8e-56 222.2 151 66.9
Rhsim07G0150700 Rhododendron simsii HOM05D007351 ORTHO05D009386 2.8e-56 222.2 166 63.3
CDE06G1133 Ceratophyllum demersum HOM05D007351 ORTHO05D009386 3.7e-56 221.9 154 66.9
Phvul.009G096100 Phaseolus vulgaris HOM05D007351 ORTHO05D009386 8.2e-56 220.7 152 64.5
Pp3c17_16830 Physcomitrium patens HOM05D007351 ORTHO05D009386 8.2e-56 220.7 163 65.0
Lj1g0014043 Lotus japonicus HOM05D007351 ORTHO05D009386 1.8e-55 219.5 152 65.1
Aqoxy7G02003 Aquilegia oxysepala HOM05D007351 ORTHO05D009386 2.4e-55 219.2 181 58.0
Hund03010 Selenicereus undatus HOM05D007351 ORTHO05D009386 4.1e-55 218.4 154 64.9
vmacro05202 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 1.5e-54 216.5 152 65.8
arahy.Tifrunner.gnm1.ann1.8MNE4Q Arachis hypogaea HOM05D007351 ORTHO05D009386 3.5e-54 215.3 173 59.5
CBR_g40414 Chara braunii HOM05D007351 ORTHO05D009386 1.3e-53 213.4 164 64.6
AagrBONN_evm.TU.Sc2ySwM_228.1243 Anthoceros agrestis HOM05D007351 ORTHO05D009386 3.8e-53 211.8 152 68.4
AUR62041846 Chenopodium quinoa HOM05D007351 ORTHO05D009386 1.1e-52 210.3 154 64.9
Sp4g05090 Schrenkiella parvula HOM05D007351 ORTHO05D009386 3.0e-50 202.2 130 70.8
CsaV3_3G046600 Cucumis sativus L. HOM05D007351 ORTHO05D009386 3.3e-49 198.7 141 65.2
Gohir.D08G102800 Gossypium hirsutum HOM05D007351 ORTHO05D009386 2.8e-48 195.7 157 59.9
VMungo1309G2796 Vigna mungo HOM05D007351 ORTHO05D009386 4.8e-48 194.9 130 66.9
Zm00001eb344390 Zea mays HOM05D007351 ORTHO05D009386 1.8e-47 193.0 135 65.2
Duzib150G1343 Durio zibethinus HOM05D007351 ORTHO05D009386 2.4e-47 192.6 134 67.2
DCAR_003046 Daucus carota HOM05D007351 ORTHO05D009386 3.1e-47 192.2 134 66.4
PGR031G1798 Punica granatum HOM05D007351 ORTHO05D009386 3.5e-46 188.7 132 65.9
QL12p031742 Quercus lobata HOM05D007351 ORTHO05D009386 2.9e-45 185.7 136 62.5
CANSAT11G2455 Cannabis sativa HOM05D007351 ORTHO05D009386 2.2e-40 169.5 154 53.2
Oeu045191.1 Olea europaea HOM05D007351 ORTHO05D009386 2.2e-40 169.5 152 56.6
Haze_21592 Corylus avellana HOM05D007351 ORTHO05D009386 3.7e-40 168.7 111 68.5
Cre17.g746897 Chlamydomonas reinhardtii HOM05D007351 ORTHO05D009386 5.4e-31 138.3 141 46.8
CANSAT54G2502 Cannabis sativa HOM05D007351 ORTHO05D009386 5.5e-28 128.3 135 48.1
SMO356G0529 Selaginella moellendorffii HOM05D017363 ORTHO05D018319 1.7e-08 63.5 138 31.2
Pp3c16_22900 Physcomitrium patens HOM05D033550 ORTHO05D017832 2.2e-08 63.2 133 33.1
vmacro05206 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 2.4e-07 59.7 166 28.9
Mapoly0006s0206 Marchantia polymorpha HOM05D017363 ORTHO05D018319 5.4e-07 58.5 152 25.0
Cre16.g683300 Chlamydomonas reinhardtii HOM05D027270 ORTHO05D017832 1.2e-06 57.4 153 28.1


User provided reference genes

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