Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO269G0003 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 3.5e-237 824.7 460 100.0
SMO116G0105 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 1.2e-120 437.6 394 71.1
SMO116G0382 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 7.9e-80 302.0 328 64.0
CANSAT25G0065 Cannabis sativa HOM05D007019 ORTHO05D008398 4.9e-29 133.3 341 37.0
MBI14_g16432_MAGBIO Magnolia biondii HOM05D007019 ORTHO05D008398 1.1e-28 132.1 350 35.7
ATR0580G102 Amborella trichopoda HOM05D007019 ORTHO05D008398 4.1e-28 130.2 350 34.3
Manes.16G132200 Manihot esculenta HOM05D007019 ORTHO05D008398 2.7e-27 127.5 330 37.6
PSO731G0070 Papaver somniferum HOM05D007019 ORTHO05D008398 5.0e-26 123.2 354 35.3
CiPaw.07G232900 Carya illinoinensis HOM05D007019 ORTHO05D008398 6.6e-26 122.9 327 35.8
FvH4_2g41350 Fragaria vesca HOM05D007019 ORTHO05D008398 6.6e-26 122.9 323 36.5
Zm00001eb257650 Zea mays HOM05D007019 ORTHO05D008398 6.6e-26 122.9 336 36.6
FAN27G2994 Fragaria x ananassa HOM05D007019 ORTHO05D008398 8.6e-26 122.5 341 35.8
Solyc08g068820.3 Solanum lycopersicum HOM05D007019 ORTHO05D008398 8.6e-26 122.5 324 35.8
EL10Ac2g02454 Beta vulgaris HOM05D007019 ORTHO05D008398 4.3e-25 120.2 345 34.5
Lsat_1_v5_gn_6_78060 Lactuca sativa HOM05D007019 ORTHO05D008398 5.6e-25 119.8 327 36.4
Pp3c21_5730 Physcomitrium patens HOM05D007019 ORTHO05D008398 5.6e-25 119.8 308 38.0
FAN15G0718 Fragaria x ananassa HOM05D007019 ORTHO05D008398 7.3e-25 119.4 295 37.3
AUR62032443 Chenopodium quinoa HOM05D007019 ORTHO05D008398 2.1e-24 117.9 366 33.3
AUR62024776 Chenopodium quinoa HOM05D007019 ORTHO05D008398 3.6e-24 117.1 305 34.4
PSO210G0129 Papaver somniferum HOM05D007019 ORTHO05D008398 4.7e-24 116.7 375 34.4
HanXRQChr03g0084841 Helianthus annuus HOM05D007019 ORTHO05D008398 2.3e-23 114.4 328 36.0
Lalb_Chr15g0081591 Lupinus albus HOM05D007019 ORTHO05D008398 2.3e-23 114.4 324 34.6
RcHm_v2.0_Chr6g0299181 Rosa chinensis HOM05D007019 ORTHO05D008398 2.3e-23 114.4 324 35.5
Hma1.2p1_0737F.1_g210790 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 3.1e-23 114.0 327 34.6
Potri.018G016200 Populus trichocarpa HOM05D007019 ORTHO05D008398 3.1e-23 114.0 325 35.1
Lj7A737G40 Lonicera japonica HOM05D007019 ORTHO05D008398 4.0e-23 113.6 343 33.5
Aqoxy7G03288 Aquilegia oxysepala HOM05D007019 ORTHO05D008398 6.8e-23 112.8 329 31.9
Eucgr.C04032 Eucalyptus grandis HOM05D007019 ORTHO05D008398 6.8e-23 112.8 342 33.6
Glyma.18G091000 Glycine max HOM05D007019 ORTHO05D008398 1.2e-22 112.1 320 35.0
Sabra18G0019700 Salix brachista HOM05D007019 ORTHO05D008398 1.5e-22 111.7 309 36.2
Hma1.2p1_0737F.1_g210800 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 2.6e-22 110.9 314 34.7
Prupe.1G396900 Prunus persica HOM05D007019 ORTHO05D008398 2.6e-22 110.9 330 35.5
unitig_46.g18223 Utricularia gibba HOM05D007019 ORTHO05D008398 3.4e-22 110.5 330 34.8
PGR044G2245 Punica granatum HOM05D007019 ORTHO05D008398 4.4e-22 110.2 337 33.8
CDE04G0815 Ceratophyllum demersum HOM05D007019 ORTHO05D008398 7.5e-22 109.4 355 30.7
Lj6g0025581 Lotus japonicus HOM05D007019 ORTHO05D008398 7.5e-22 109.4 324 34.0
DCAR_003030 Daucus carota HOM05D007019 ORTHO05D008398 1.3e-21 108.6 333 34.8
Nn6g33490 Nelumbo nucifera HOM05D007019 ORTHO05D008398 1.3e-21 108.6 349 32.1
arahy.Tifrunner.gnm1.ann1.MG10WM Arachis hypogaea HOM05D007019 ORTHO05D008398 1.7e-21 108.2 322 33.9
TWI32G0429 Tripterygium wilfordii HOM05D007019 ORTHO05D008398 2.2e-21 107.8 323 34.7
Thecc.09G013400 Theobroma cacao HOM05D007019 ORTHO05D008398 2.9e-21 107.5 323 35.9
arahy.Tifrunner.gnm1.ann1.SS16UG Arachis hypogaea HOM05D007019 ORTHO05D008398 3.7e-21 107.1 323 33.4
Carub.0004s0445 Capsella rubella HOM05D007019 ORTHO05D008398 8.3e-21 105.9 340 34.1
Atru.chr7.2574 Acer truncatum HOM05D007019 ORTHO05D008398 1.9e-20 104.8 323 34.1
Rhsim02G0217600 Rhododendron simsii HOM05D007019 ORTHO05D008398 9.2e-20 102.4 359 31.8
SGA_v2.0_scaffold169G38600 Striga asiatica HOM05D007019 ORTHO05D008398 9.2e-20 102.4 321 31.5
Mapoly0067s0020 Marchantia polymorpha HOM05D007019 ORTHO05D008398 2.0e-19 101.3 313 32.9
Psat5g174160 Pisum sativum HOM05D007019 ORTHO05D008398 6.0e-19 99.8 326 32.8
Glyma.08G321000 Glycine max HOM05D007019 ORTHO05D008398 1.3e-18 98.6 326 32.2
Gorai.009G064200 Gossypium raimondii HOM05D007019 ORTHO05D008398 1.7e-18 98.2 327 35.2
Cfa013011 Carpinus fangiana HOM05D007019 ORTHO05D008398 3.0e-18 97.4 330 33.0
Actinidia14141 Actinidia chinensis HOM05D007019 ORTHO05D008398 1.5e-17 95.1 307 31.3
Duzib168G1437 Durio zibethinus HOM05D007019 ORTHO05D008398 3.3e-17 94.0 324 34.9
A09p56030 Brassica napus HOM05D007019 ORTHO05D008398 7.3e-17 92.8 306 30.4
CSS0016918 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 7.3e-17 92.8 338 32.5
CSS0023374 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 7.3e-17 92.8 338 32.5
BraA09t41004Z Brassica rapa HOM05D007019 ORTHO05D008398 1.2e-16 92.0 308 29.9
Cc00_g05220 Coffea canephora HOM05D007019 ORTHO05D008398 3.6e-16 90.5 333 31.8
Dinv10229 Davidia involucrata HOM05D007019 ORTHO05D008398 4.7e-16 90.1 291 30.9
Sp4g03850 Schrenkiella parvula HOM05D007019 ORTHO05D008398 8.1e-16 89.4 338 32.2
CARHR294580 Cardamine hirsuta HOM05D007019 ORTHO05D008398 1.1e-15 89.0 357 31.4
CAN.G273.24 Capsicum annuum HOM05D007019 ORTHO05D008398 1.4e-15 88.6 325 32.0
A09p56090 Brassica napus HOM05D007019 ORTHO05D008398 1.8e-15 88.2 319 29.2
MD08G1051900 Malus domestica HOM05D007019 ORTHO05D008398 2.3e-15 87.8 331 29.9
SEGI_04420 Sequoiadendron giganteum HOM05D007019 ORTHO05D008398 3.1e-15 87.4 307 32.6
Medtr3g053700 Medicago truncatula HOM05D007019 ORTHO05D008398 5.2e-15 86.7 325 30.8
Hund25606 Selenicereus undatus HOM05D007019 ORTHO05D008398 8.9e-15 85.9 348 29.6
COL.COLO4_18972 Corchorus olitorius HOM05D007019 ORTHO05D008398 1.2e-14 85.5 324 34.0
MELO3C011312.2 Cucumis melo HOM05D007019 ORTHO05D008398 1.2e-14 85.5 359 29.5
AagrBONN_evm.TU.Sc2ySwM_117.1463 Anthoceros agrestis HOM05D007019 ORTHO05D008398 1.5e-14 85.1 345 29.9
HPP92_010745 Vanilla planifolia HOM05D007019 ORTHO05D008398 1.5e-14 85.1 356 29.2
Gohir.D05G063200 Gossypium hirsutum HOM05D007019 ORTHO05D008398 2.0e-14 84.7 325 32.3
Oeu021907.1 Olea europaea HOM05D007019 ORTHO05D008398 2.6e-14 84.3 301 31.9
Phvul.006G047900 Phaseolus vulgaris HOM05D007019 ORTHO05D008398 2.6e-14 84.3 324 30.2
THA.LOC104819948 Tarenaya hassleriana HOM05D007019 ORTHO05D008398 3.4e-14 84.0 362 28.5
CsaV3_2G032590 Cucumis sativus L. HOM05D007019 ORTHO05D008398 4.4e-14 83.6 359 29.2
AT2G24830 Arabidopsis thaliana HOM05D007019 ORTHO05D008398 7.5e-14 82.8 349 29.2
Dinv03401 Davidia involucrata HOM05D007019 ORTHO05D008398 7.5e-14 82.8 351 27.9
TPR.G32253 Trifolium pratense HOM05D007019 ORTHO05D008398 7.5e-14 82.8 329 30.1
Ciclev10008089m.g Citrus clementina HOM05D007019 ORTHO05D008398 1.3e-13 82.0 340 31.5
PGSC0003DMG400014784 Solanum tuberosum HOM05D007019 ORTHO05D008398 2.2e-13 81.3 323 31.9
MSTRG.1627 Avicennia marina HOM05D007019 ORTHO05D008398 2.9e-13 80.9 306 32.0
ClCG08G013800 Citrullus lanatus HOM05D007019 ORTHO05D008398 3.7e-13 80.5 356 29.8
ECA240G4302 Erigeron canadensis HOM05D007019 ORTHO05D008398 3.7e-13 80.5 325 31.1
SHI21092 Sapria himalayana HOM05D007019 ORTHO05D008398 8.3e-13 79.3 284 30.6
Nitab4.5_0000406g0110 Nicotiana tabacum HOM05D007019 ORTHO05D008398 1.9e-12 78.2 299 30.4
Gohir.A05G061000 Gossypium hirsutum HOM05D007019 ORTHO05D008398 2.4e-12 77.8 327 31.8
Migut.E01445 Erythranthe guttata HOM05D007019 ORTHO05D008398 3.2e-12 77.4 359 27.9
QL02p018053 Quercus lobata HOM05D007019 ORTHO05D008398 3.2e-12 77.4 331 30.8
Sed0002524 Sechium edule HOM05D007019 ORTHO05D008398 4.1e-12 77.0 360 29.4
C08p39020 Brassica napus HOM05D007019 ORTHO05D008398 2.7e-11 74.3 344 28.2
BolC8t51475H Brassica oleracea HOM05D007019 ORTHO05D008398 2.7e-11 74.3 344 28.2
VMungo0540G1233 Vigna mungo HOM05D007019 ORTHO05D008398 6.0e-11 73.2 324 27.2
CBR_g30106 Chara braunii HOM05D007019 ORTHO05D008398 3.0e-10 70.9 145 40.0
BcaC07g40903 Brassica carinata HOM05D007019 ORTHO05D008398 7.3e-09 66.2 334 27.8
Ca_26389_v3 Cicer arietinum L. HOM05D007019 ORTHO05D008398 7.3e-09 66.2 343 26.5
Aa31LG7G11570 Aethionema arabicum HOM05D007019 ORTHO05D008398 3.6e-08 63.9 372 26.9
Cpa.g.sc148.46 Carica papaya HOM05D007019 ORTHO05D008398 8.1e-08 62.8 329 27.7
Thhalv10000137m.g Eutrema salsugineum HOM05D007019 ORTHO05D008398 1.4e-07 62.0 340 28.2
Nitab4.5_0012106g0030 Nicotiana tabacum HOM05D007019 ORTHO05D008398 3.1e-07 60.8 298 29.9
vmacro11274 Vaccinium macrocarpon HOM05D007019 ORTHO05D008398 4.0e-07 60.5 274 31.8
Sc23g0006120 Simmondsia chinensis HOM05D007019 ORTHO05D008398 5.2e-07 60.1 330 27.6
Sopen08g022560 Solanum pennellii HOM05D007019 ORTHO05D008398 8.9e-07 59.3 246 30.5


User provided reference genes

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