Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO268G0024 Selaginella moellendorffii HOM05D007381 ORTHO05D009496 1.9e-184 649.0 323 100.0
Pp3c18_1320 Physcomitrium patens HOM05D007381 ORTHO05D009496 1.7e-116 423.3 274 74.1
SEGI_03968 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 1.7e-116 423.3 273 74.7
AagrBONN_evm.TU.Sc2ySwM_362.1621 Anthoceros agrestis HOM05D007381 ORTHO05D009496 5.5e-112 408.3 273 70.3
PSO170G6067 Papaver somniferum HOM05D007381 ORTHO05D009496 9.1e-107 391.0 297 62.3
Dinv26914 Davidia involucrata HOM05D007381 ORTHO05D009496 2.0e-106 389.8 297 63.0
TAR628G1049 Trochodendron aralioides HOM05D007381 ORTHO05D009496 4.5e-106 388.7 273 65.6
PGR102G2572 Punica granatum HOM05D007381 ORTHO05D009496 1.0e-105 387.5 297 63.6
Aqoxy5G00892 Aquilegia oxysepala HOM05D007381 ORTHO05D009496 6.5e-105 384.8 273 65.9
EL10Ac6g15638 Beta vulgaris HOM05D007381 ORTHO05D009496 6.5e-105 384.8 297 60.6
Actinidia16435 Actinidia chinensis HOM05D007381 ORTHO05D009496 8.5e-105 384.4 298 63.4
arahy.Tifrunner.gnm1.ann1.I4PWFV Arachis hypogaea HOM05D007381 ORTHO05D009496 8.5e-105 384.4 297 63.6
arahy.Tifrunner.gnm1.ann1.S5EEEI Arachis hypogaea HOM05D007381 ORTHO05D009496 8.5e-105 384.4 297 64.0
Dinv30077 Davidia involucrata HOM05D007381 ORTHO05D009496 1.1e-104 384.0 297 61.3
Nn1g04598 Nelumbo nucifera HOM05D007381 ORTHO05D009496 1.9e-104 383.3 297 62.3
Eucgr.H02297 Eucalyptus grandis HOM05D007381 ORTHO05D009496 3.2e-104 382.5 273 67.4
Migut.H00360 Erythranthe guttata HOM05D007381 ORTHO05D009496 4.2e-104 382.1 297 59.6
Peaxi162Scf00264g00118 Petunia axillaris HOM05D007381 ORTHO05D009496 7.2e-104 381.3 297 61.6
Lj2g0010288 Lotus japonicus HOM05D007381 ORTHO05D009496 9.4e-104 380.9 297 63.0
GSVIVG01000134001 Vitis vinifera HOM05D007381 ORTHO05D009496 2.1e-103 379.8 297 62.0
MELO3C007622.2 Cucumis melo HOM05D007381 ORTHO05D009496 2.7e-103 379.4 297 61.6
Cfa004113 Carpinus fangiana HOM05D007381 ORTHO05D009496 3.6e-103 379.0 271 67.5
Thecc.01G070300 Theobroma cacao HOM05D007381 ORTHO05D009496 4.7e-103 378.6 273 66.3
Atru.chr3.157 Acer truncatum HOM05D007381 ORTHO05D009496 8.0e-103 377.9 273 65.2
Atru.chr3.186 Acer truncatum HOM05D007381 ORTHO05D009496 8.0e-103 377.9 273 65.2
Cpa.g.sc6.38 Carica papaya HOM05D007381 ORTHO05D009496 8.0e-103 377.9 297 61.6
Sed0015462 Sechium edule HOM05D007381 ORTHO05D009496 1.0e-102 377.5 297 61.3
CSS0037700 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.4e-102 377.1 297 62.3
ATR0019G019 Amborella trichopoda HOM05D007381 ORTHO05D009496 1.8e-102 376.7 297 60.3
CsaV3_6G043990 Cucumis sativus L. HOM05D007381 ORTHO05D009496 1.8e-102 376.7 297 61.3
HanXRQChr12g0373171 Helianthus annuus HOM05D007381 ORTHO05D009496 1.8e-102 376.7 273 63.0
MD00G1015500 Malus domestica HOM05D007381 ORTHO05D009496 1.8e-102 376.7 297 62.0
Os07g0588800 Oryza sativa ssp. japonica HOM05D007381 ORTHO05D009496 1.8e-102 376.7 274 64.6
Prupe.6G222900 Prunus persica HOM05D007381 ORTHO05D009496 1.8e-102 376.7 297 62.0
ECA232G2614 Erigeron canadensis HOM05D007381 ORTHO05D009496 2.3e-102 376.3 273 63.7
CSS0029250 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 3.0e-102 375.9 297 62.3
Gorai.011G107900 Gossypium raimondii HOM05D007381 ORTHO05D009496 6.7e-102 374.8 297 62.0
Phvul.002G012100 Phaseolus vulgaris HOM05D007381 ORTHO05D009496 6.7e-102 374.8 297 62.3
Rhsim08G0094800 Rhododendron simsii HOM05D007381 ORTHO05D009496 8.8e-102 374.4 297 61.3
Lj4A160G63 Lonicera japonica HOM05D007381 ORTHO05D009496 1.2e-101 374.0 302 59.9
Mapoly0084s0082 Marchantia polymorpha HOM05D007381 ORTHO05D009496 1.2e-101 374.0 275 64.7
Zm00001eb108230 Zea mays HOM05D007381 ORTHO05D009496 1.5e-101 373.6 274 63.9
Ca_24708_v3 Cicer arietinum L. HOM05D007381 ORTHO05D009496 2.0e-101 373.2 297 61.6
Lsat_1_v5_gn_4_160940 Lactuca sativa HOM05D007381 ORTHO05D009496 2.0e-101 373.2 273 63.0
MD15G1294900 Malus domestica HOM05D007381 ORTHO05D009496 2.0e-101 373.2 297 61.3
Cc07_g06930 Coffea canephora HOM05D007381 ORTHO05D009496 2.6e-101 372.9 273 63.7
Gohir.D10G098200 Gossypium hirsutum HOM05D007381 ORTHO05D009496 2.6e-101 372.9 297 61.6
Gohir.A10G089900 Gossypium hirsutum HOM05D007381 ORTHO05D009496 3.3e-101 372.5 297 61.6
Lalb_Chr05g0213621 Lupinus albus HOM05D007381 ORTHO05D009496 3.3e-101 372.5 297 61.6
SGA_v2.0_scaffold15G07431 Striga asiatica HOM05D007381 ORTHO05D009496 5.7e-101 371.7 273 62.6
Medtr5g015840 Medicago truncatula HOM05D007381 ORTHO05D009496 7.5e-101 371.3 297 62.3
COL.COLO4_11553 Corchorus olitorius HOM05D007381 ORTHO05D009496 9.7e-101 370.9 297 60.3
Nitab4.5_0000651g0120 Nicotiana tabacum HOM05D007381 ORTHO05D009496 9.7e-101 370.9 274 63.9
Sopen02g037070 Solanum pennellii HOM05D007381 ORTHO05D009496 9.7e-101 370.9 297 59.6
PGSC0003DMG400024934 Solanum tuberosum HOM05D007381 ORTHO05D009496 9.7e-101 370.9 297 59.6
THA.LOC104819874 Tarenaya hassleriana HOM05D007381 ORTHO05D009496 9.7e-101 370.9 297 62.0
Solyc02g092510.3 Solanum lycopersicum HOM05D007381 ORTHO05D009496 2.2e-100 369.8 297 59.6
VMungo1215G2498 Vigna mungo HOM05D007381 ORTHO05D009496 2.8e-100 369.4 297 61.3
CAN.G1075.23 Capsicum annuum HOM05D007381 ORTHO05D009496 3.7e-100 369.0 297 58.9
Potri.007G053900 Populus trichocarpa HOM05D007381 ORTHO05D009496 3.7e-100 369.0 297 59.9
Haze_15300 Corylus avellana HOM05D007381 ORTHO05D009496 6.3e-100 368.2 279 65.2
RcHm_v2.0_Chr2g0107591 Rosa chinensis HOM05D007381 ORTHO05D009496 6.3e-100 368.2 297 59.9
CANSAT01G2210 Cannabis sativa HOM05D007381 ORTHO05D009496 8.2e-100 367.9 273 65.9
CDE07G0114 Ceratophyllum demersum HOM05D007381 ORTHO05D009496 8.2e-100 367.9 271 64.9
Ciclev10025991m.g Citrus clementina HOM05D007381 ORTHO05D009496 1.8e-99 366.7 281 63.0
Glyma.01G192900 Glycine max HOM05D007381 ORTHO05D009496 2.4e-99 366.3 273 64.5
Lalb_Chr16g0378811 Lupinus albus HOM05D007381 ORTHO05D009496 3.1e-99 365.9 273 63.7
TPR.G20964 Trifolium pratense HOM05D007381 ORTHO05D009496 7.0e-99 364.8 273 65.2
Glyma.11G048900 Glycine max HOM05D007381 ORTHO05D009496 1.2e-98 364.0 273 64.5
Nitab4.5_0006069g0020 Nicotiana tabacum HOM05D007381 ORTHO05D009496 1.6e-98 363.6 273 62.6
Aa31LG6G14440 Aethionema arabicum HOM05D007381 ORTHO05D009496 2.0e-98 363.2 297 59.3
FvH4_1g17400 Fragaria vesca HOM05D007381 ORTHO05D009496 3.5e-98 362.5 273 63.0
FAN19G2977 Fragaria x ananassa HOM05D007381 ORTHO05D009496 3.5e-98 362.5 273 63.0
FAN23G1987 Fragaria x ananassa HOM05D007381 ORTHO05D009496 3.5e-98 362.5 273 62.6
Manes.12G110400 Manihot esculenta HOM05D007381 ORTHO05D009496 1.0e-97 360.9 297 59.6
FAN26G1164 Fragaria x ananassa HOM05D007381 ORTHO05D009496 3.8e-97 359.0 273 62.3
FAN28G2520 Fragaria x ananassa HOM05D007381 ORTHO05D009496 5.0e-97 358.6 273 62.6
Sabra07G0047100 Salix brachista HOM05D007381 ORTHO05D009496 5.0e-97 358.6 289 60.2
unitig_899.g14582 Utricularia gibba HOM05D007381 ORTHO05D009496 2.5e-96 356.3 277 60.3
vmacro17999 Vaccinium macrocarpon HOM05D007381 ORTHO05D009496 4.4e-93 345.5 336 52.4
ClCG01G017450 Citrullus lanatus HOM05D007381 ORTHO05D009496 2.4e-91 339.7 381 48.0
Oeu040581.2 Olea europaea HOM05D007381 ORTHO05D009496 2.7e-90 336.3 361 47.4
TWI73G0080 Tripterygium wilfordii HOM05D007381 ORTHO05D009496 2.8e-87 326.2 297 56.6
DCAR_021466 Daucus carota HOM05D007381 ORTHO05D009496 2.2e-84 316.6 297 54.5
SEGI_30700 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 1.3e-81 307.4 205 75.6
CiPaw.01G006100 Carya illinoinensis HOM05D007381 ORTHO05D009496 4.0e-78 295.8 236 62.3
Cre07.g344150 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D009496 1.4e-75 287.3 289 51.6
Hma1.2p1_0730F.1_g209840 Hydrangea macrophylla HOM05D007381 ORTHO05D009496 7.0e-75 285.0 229 62.4
Duzib187G0033 Durio zibethinus HOM05D007381 ORTHO05D009496 8.6e-73 278.1 297 49.2
HPP92_026572 Vanilla planifolia HOM05D007381 ORTHO05D009496 8.3e-68 261.5 185 64.9
Hund13939 Selenicereus undatus HOM05D007381 ORTHO05D009496 3.0e-65 253.1 251 54.2
MCO12G353 Micromonas commoda HOM05D007381 ORTHO05D009496 4.1e-59 232.6 260 49.2
PRCOL_00002255 Prasinoderma coloniale HOM05D007381 ORTHO05D009496 9.5e-56 221.5 233 51.5
CBR_g40647 Chara braunii HOM05D007381 ORTHO05D009496 6.2e-55 218.8 528 29.2
QL06p039803 Quercus lobata HOM05D007381 ORTHO05D009496 2.8e-47 193.4 128 69.5
CSS0032842 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.6e-42 177.6 190 53.2
ATR0019G012 Amborella trichopoda HOM05D007381 ORTHO05D009496 2.0e-37 160.6 110 69.1
Cfa025505 Carpinus fangiana HOM05D007381 ORTHO05D009496 3.1e-22 110.2 285 30.9
CBR_g29716 Chara braunii HOM05D007381 ORTHO05D009496 5.3e-22 109.4 95 50.5
SHI33146 Sapria himalayana HOM05D007381 ORTHO05D009496 3.9e-17 93.2 69 60.9
Ca_17124_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 2.2e-15 87.4 87 51.7
Ca_08895_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 2.9e-12 77.0 71 50.7


User provided reference genes

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