Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO266G0103 Selaginella moellendorffii HOM05D006127 ORTHO05D007465 2.5e-127 458.8 226 100.0
AagrBONN_evm.TU.Sc2ySwM_368.2100 Anthoceros agrestis HOM05D006127 ORTHO05D007465 1.1e-53 214.2 203 50.7
Mapoly0009s0032 Marchantia polymorpha HOM05D006127 ORTHO05D007465 7.4e-47 191.4 195 46.7
Pp3c17_22580 Physcomitrium patens HOM05D006127 ORTHO05D007465 9.7e-39 164.5 214 36.4
Manes.06G153500 Manihot esculenta HOM05D006127 ORTHO05D007465 9.1e-37 157.9 223 36.8
ATR0721G168 Amborella trichopoda HOM05D006127 ORTHO05D007465 5.9e-36 155.2 203 37.4
PSO266G0017 Papaver somniferum HOM05D006127 ORTHO05D007465 3.8e-35 152.5 195 36.4
Eucgr.A02719 Eucalyptus grandis HOM05D006127 ORTHO05D007465 5.0e-35 152.1 199 38.7
PSO478G4852 Papaver somniferum HOM05D006127 ORTHO05D007465 5.0e-35 152.1 195 36.4
Zm00001eb119480 Zea mays HOM05D006127 ORTHO05D007465 1.4e-34 150.6 219 34.7
HanXRQChr00c0486g0575011 Helianthus annuus HOM05D006127 ORTHO05D007465 1.9e-34 150.2 216 35.6
Lsat_1_v5_gn_9_56840 Lactuca sativa HOM05D006127 ORTHO05D007465 2.5e-34 149.8 216 37.0
HanXRQChr15g0494171 Helianthus annuus HOM05D006127 ORTHO05D007465 3.2e-34 149.4 208 36.5
HPP92_008801 Vanilla planifolia HOM05D006127 ORTHO05D007465 3.2e-34 149.4 191 38.7
HPP92_005266 Vanilla planifolia HOM05D006127 ORTHO05D007465 4.2e-34 149.1 194 38.7
Ah.13g069260 Amaranthus hybridus HOM05D006127 ORTHO05D007465 5.5e-34 148.7 194 39.2
CDE04G3725 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 7.2e-34 148.3 192 37.0
AUR62021102 Chenopodium quinoa HOM05D006127 ORTHO05D007465 9.4e-34 147.9 194 38.7
ECA232G4568 Erigeron canadensis HOM05D006127 ORTHO05D007465 9.4e-34 147.9 216 34.3
FAN03G2078 Fragaria x ananassa HOM05D006127 ORTHO05D007465 9.4e-34 147.9 197 37.1
FAN03G3352 Fragaria x ananassa HOM05D006127 ORTHO05D007465 9.4e-34 147.9 197 37.1
Potri.017G148900 Populus trichocarpa HOM05D006127 ORTHO05D007465 1.2e-33 147.5 205 36.1
RcHm_v2.0_Chr1g0378611 Rosa chinensis HOM05D006127 ORTHO05D007465 1.2e-33 147.5 230 33.9
EL10Ac3g05405 Beta vulgaris HOM05D006127 ORTHO05D007465 1.6e-33 147.1 194 39.2
AUR62031438 Chenopodium quinoa HOM05D006127 ORTHO05D007465 1.6e-33 147.1 194 38.7
Lalb_Chr01g0009501 Lupinus albus HOM05D006127 ORTHO05D007465 1.6e-33 147.1 194 37.6
FAN06G1782 Fragaria x ananassa HOM05D006127 ORTHO05D007465 2.7e-33 146.4 194 37.1
FAN06G3350 Fragaria x ananassa HOM05D006127 ORTHO05D007465 2.7e-33 146.4 194 37.1
FAN10G0315 Fragaria x ananassa HOM05D006127 ORTHO05D007465 2.7e-33 146.4 194 37.1
FAN10G2357 Fragaria x ananassa HOM05D006127 ORTHO05D007465 2.7e-33 146.4 194 37.1
Psat0s2186g0040 Pisum sativum HOM05D006127 ORTHO05D007465 2.7e-33 146.4 194 37.1
GSVIVG01028824001 Vitis vinifera HOM05D006127 ORTHO05D007465 2.7e-33 146.4 216 35.2
Medtr6g053110 Medicago truncatula HOM05D006127 ORTHO05D007465 3.6e-33 146.0 192 37.0
Prupe.2G302400 Prunus persica HOM05D006127 ORTHO05D007465 3.6e-33 146.0 192 37.5
Aqoxy7G00200 Aquilegia oxysepala HOM05D006127 ORTHO05D007465 6.1e-33 145.2 200 37.0
Sed0008008 Sechium edule HOM05D006127 ORTHO05D007465 6.1e-33 145.2 194 36.6
TAR374G0777 Trochodendron aralioides HOM05D006127 ORTHO05D007465 6.1e-33 145.2 203 35.5
MD07G1280200 Malus domestica HOM05D006127 ORTHO05D007465 7.9e-33 144.8 192 37.5
Solyc03g007620.3 Solanum lycopersicum HOM05D006127 ORTHO05D007465 7.9e-33 144.8 202 35.6
Sopen03g003570 Solanum pennellii HOM05D006127 ORTHO05D007465 7.9e-33 144.8 202 35.6
CAN.G236.3 Capsicum annuum HOM05D006127 ORTHO05D007465 1.0e-32 144.4 202 35.6
MELO3C005842.2 Cucumis melo HOM05D006127 ORTHO05D007465 1.0e-32 144.4 194 38.1
CsaV3_5G001020 Cucumis sativus L. HOM05D006127 ORTHO05D007465 1.0e-32 144.4 194 37.6
Gorai.006G199600 Gossypium raimondii HOM05D006127 ORTHO05D007465 1.0e-32 144.4 195 37.4
TWI23G0320 Tripterygium wilfordii HOM05D006127 ORTHO05D007465 1.0e-32 144.4 202 36.6
Gohir.D09G177600 Gossypium hirsutum HOM05D006127 ORTHO05D007465 1.4e-32 144.1 195 37.4
Peaxi162Scf00444g00314 Petunia axillaris HOM05D006127 ORTHO05D007465 1.4e-32 144.1 199 34.2
TPR.G9177 Trifolium pratense HOM05D006127 ORTHO05D007465 1.4e-32 144.1 192 36.5
Glyma.16G177100 Glycine max HOM05D006127 ORTHO05D007465 1.8e-32 143.7 194 38.7
MD01G1210100 Malus domestica HOM05D006127 ORTHO05D007465 1.8e-32 143.7 192 37.5
Sp2g25830 Schrenkiella parvula HOM05D006127 ORTHO05D007465 1.8e-32 143.7 200 38.0
Gohir.A09G182900 Gossypium hirsutum HOM05D006127 ORTHO05D007465 2.3e-32 143.3 195 36.9
Potri.004G072100 Populus trichocarpa HOM05D006127 ORTHO05D007465 2.3e-32 143.3 202 35.1
CARHR276460 Cardamine hirsuta HOM05D006127 ORTHO05D007465 3.0e-32 142.9 203 37.4
PGSC0003DMG400009503 Solanum tuberosum HOM05D006127 ORTHO05D007465 3.0e-32 142.9 202 35.1
Cfa016302 Carpinus fangiana HOM05D006127 ORTHO05D007465 3.9e-32 142.5 203 35.0
Glyma.09G129300 Glycine max HOM05D006127 ORTHO05D007465 3.9e-32 142.5 194 36.6
Phvul.004G105900 Phaseolus vulgaris HOM05D006127 ORTHO05D007465 3.9e-32 142.5 217 34.6
PGR044G2596 Punica granatum HOM05D006127 ORTHO05D007465 3.9e-32 142.5 192 35.9
Ca_26803_v3 Cicer arietinum L. HOM05D006127 ORTHO05D007465 5.1e-32 142.1 218 33.5
Cc02_g02250 Coffea canephora HOM05D006127 ORTHO05D007465 5.1e-32 142.1 199 36.2
Oeu003330.1 Olea europaea HOM05D006127 ORTHO05D007465 5.1e-32 142.1 192 38.0
Ah.07g206460 Amaranthus hybridus HOM05D006127 ORTHO05D007465 6.7e-32 141.7 211 36.5
Nitab4.5_0000472g0230 Nicotiana tabacum HOM05D006127 ORTHO05D007465 6.7e-32 141.7 202 34.7
AL8G39630 Arabidopsis lyrata HOM05D006127 ORTHO05D007465 8.8e-32 141.4 202 36.6
AT5G62650 Arabidopsis thaliana HOM05D006127 ORTHO05D007465 8.8e-32 141.4 202 36.6
CSS0002355 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 8.8e-32 141.4 226 32.7
DCAR_008898 Daucus carota HOM05D006127 ORTHO05D007465 8.8e-32 141.4 192 37.5
Thhalv10003967m.g Eutrema salsugineum HOM05D006127 ORTHO05D007465 8.8e-32 141.4 222 35.1
QL09p012458 Quercus lobata HOM05D006127 ORTHO05D007465 8.8e-32 141.4 205 35.1
Sabra17G0124200 Salix brachista HOM05D006127 ORTHO05D007465 8.8e-32 141.4 194 36.1
BcaC01g02503 Brassica carinata HOM05D006127 ORTHO05D007465 1.1e-31 141.0 200 37.0
A06p29390 Brassica napus HOM05D006127 ORTHO05D007465 1.1e-31 141.0 200 37.0
C03p64120 Brassica napus HOM05D006127 ORTHO05D007465 1.1e-31 141.0 200 37.0
BolC3t18667H Brassica oleracea HOM05D006127 ORTHO05D007465 1.1e-31 141.0 200 37.0
BraA06t25889Z Brassica rapa HOM05D006127 ORTHO05D007465 1.1e-31 141.0 200 37.0
Lj2g0027649 Lotus japonicus HOM05D006127 ORTHO05D007465 1.5e-31 140.6 194 35.6
MSTRG.8699 Avicennia marina HOM05D006127 ORTHO05D007465 2.0e-31 140.2 194 36.6
BcaB02g09667 Brassica carinata HOM05D006127 ORTHO05D007465 2.0e-31 140.2 200 37.0
ClCG01G000890 Citrullus lanatus HOM05D006127 ORTHO05D007465 2.0e-31 140.2 189 37.0
THA.LOC104818243 Tarenaya hassleriana HOM05D006127 ORTHO05D007465 2.0e-31 140.2 200 37.0
Sc13g0009280 Simmondsia chinensis HOM05D006127 ORTHO05D007465 2.6e-31 139.8 200 35.0
CSS0021566 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 3.3e-31 139.4 196 36.2
Carub.0008s2341 Capsella rubella HOM05D006127 ORTHO05D007465 3.3e-31 139.4 222 35.1
Aa31LG11G990 Aethionema arabicum HOM05D006127 ORTHO05D007465 5.7e-31 138.7 205 38.0
CiPaw.06G004100 Carya illinoinensis HOM05D006127 ORTHO05D007465 5.7e-31 138.7 192 35.4
FvH4_7g30450 Fragaria vesca HOM05D006127 ORTHO05D007465 5.7e-31 138.7 197 36.0
Dinv35267 Davidia involucrata HOM05D006127 ORTHO05D007465 7.4e-31 138.3 203 34.5
unitig_747.g21859 Utricularia gibba HOM05D006127 ORTHO05D007465 7.4e-31 138.3 233 34.3
Cpa.g.sc107.127 Carica papaya HOM05D006127 ORTHO05D007465 9.7e-31 137.9 195 35.4
CiPaw.05G261300 Carya illinoinensis HOM05D006127 ORTHO05D007465 9.7e-31 137.9 194 35.1
Dinv28380 Davidia involucrata HOM05D006127 ORTHO05D007465 1.3e-30 137.5 203 34.5
Lj1A1007G54 Lonicera japonica HOM05D006127 ORTHO05D007465 1.3e-30 137.5 224 33.0
Gorai.003G069400 Gossypium raimondii HOM05D006127 ORTHO05D007465 2.2e-30 136.7 197 35.5
Sabra04G0047500 Salix brachista HOM05D006127 ORTHO05D007465 2.2e-30 136.7 203 35.5
Migut.F00277 Erythranthe guttata HOM05D006127 ORTHO05D007465 2.8e-30 136.3 204 33.3
Gohir.D11G229300 Gossypium hirsutum HOM05D006127 ORTHO05D007465 2.8e-30 136.3 197 35.0
Nitab4.5_0001331g0020 Nicotiana tabacum HOM05D006127 ORTHO05D007465 2.8e-30 136.3 211 33.2
Thecc.03G186000 Theobroma cacao HOM05D006127 ORTHO05D007465 2.8e-30 136.3 223 33.6
Actinidia34165 Actinidia chinensis HOM05D006127 ORTHO05D007465 3.7e-30 136.0 209 33.5
Atru.chr1.338 Acer truncatum HOM05D006127 ORTHO05D007465 4.8e-30 135.6 195 34.4
COL.COLO4_30292 Corchorus olitorius HOM05D006127 ORTHO05D007465 4.8e-30 135.6 202 34.2
Gohir.A11G225200 Gossypium hirsutum HOM05D006127 ORTHO05D007465 4.8e-30 135.6 194 35.6
Hund04798 Selenicereus undatus HOM05D006127 ORTHO05D007465 1.1e-29 134.4 184 35.3
Ciclev10004691m.g Citrus clementina HOM05D006127 ORTHO05D007465 1.4e-29 134.0 194 34.0
Oeu027861.1 Olea europaea HOM05D006127 ORTHO05D007465 2.0e-28 130.2 191 33.5
arahy.Tifrunner.gnm1.ann1.HXNP43 Arachis hypogaea HOM05D006127 ORTHO05D007465 2.6e-28 129.8 209 33.0
arahy.Tifrunner.gnm1.ann1.AR9FJK Arachis hypogaea HOM05D006127 ORTHO05D007465 5.9e-28 128.6 216 32.4
vmacro06616 Vaccinium macrocarpon HOM05D006127 ORTHO05D007465 7.7e-28 128.3 203 33.0
Rhsim03G0192200 Rhododendron simsii HOM05D006127 ORTHO05D007465 1.0e-27 127.9 205 34.1
Nn6g32416 Nelumbo nucifera HOM05D006127 ORTHO05D007465 9.4e-26 121.3 203 32.5
SGA_v2.0_scaffold60G21123 Striga asiatica HOM05D006127 ORTHO05D007465 1.4e-24 117.5 195 35.9
CDE03G0317 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 2.2e-22 110.2 186 31.2
SEGI_03634 Sequoiadendron giganteum HOM05D006127 ORTHO05D007465 1.5e-18 97.4 135 36.3
SGA_v2.0_scaffold192G40622 Striga asiatica HOM05D006127 ORTHO05D007465 1.9e-18 97.1 191 34.6
Haze_00059 Corylus avellana HOM05D006127 ORTHO05D007465 2.5e-18 96.7 192 30.2
Os01g0225300 Oryza sativa ssp. japonica HOM05D006127 ORTHO05D007465 2.1e-17 93.6 132 34.8
VMungo0464G0768 Vigna mungo HOM05D006127 ORTHO05D007465 3.0e-16 89.7 147 30.6
Nn1g01683 Nelumbo nucifera HOM05D006127 ORTHO05D007465 1.5e-10 70.9 81 39.5
FAN01G1207 Fragaria x ananassa HOM05D006127 ORTHO05D007465 6.1e-09 65.5 71 39.4


User provided reference genes

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