Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO266G0070 Selaginella moellendorffii HOM05D005394 ORTHO05D006909 0.0e+00 1507.3 806 100.0
Mapoly0082s0010 Marchantia polymorpha HOM05D005394 ORTHO05D006909 3.8e-279 964.9 802 62.3
TAR626G0164 Trochodendron aralioides HOM05D005394 ORTHO05D006909 6.3e-258 894.4 791 58.5
SEGI_12117 Sequoiadendron giganteum HOM05D005394 ORTHO05D006909 8.3e-258 894.0 810 58.1
Pp3c10_16550 Physcomitrium patens HOM05D005394 ORTHO05D006909 4.5e-256 888.3 800 58.2
MBI16_g26174_MAGBIO Magnolia biondii HOM05D005394 ORTHO05D006909 2.9e-255 885.6 796 57.9
Pp3c14_13420 Physcomitrium patens HOM05D005394 ORTHO05D006909 1.4e-252 876.7 815 57.4
HanXRQChr16g0503181 Helianthus annuus HOM05D005394 ORTHO05D006909 2.3e-252 875.9 813 56.8
HanXRQChr17g0559821 Helianthus annuus HOM05D005394 ORTHO05D006909 3.0e-252 875.5 785 58.2
Aqoxy1G01759 Aquilegia oxysepala HOM05D005394 ORTHO05D006909 2.6e-251 872.5 791 57.1
Nn8g41245 Nelumbo nucifera HOM05D005394 ORTHO05D006909 2.2e-250 869.4 815 56.3
Sc06g0007690 Simmondsia chinensis HOM05D005394 ORTHO05D006909 8.3e-250 867.5 801 55.1
Ca_06271_v3 Cicer arietinum L. HOM05D005394 ORTHO05D006909 1.8e-249 866.3 787 56.8
Ciclev10030699m.g Citrus clementina HOM05D005394 ORTHO05D006909 1.8e-249 866.3 786 57.3
Dinv07076 Davidia involucrata HOM05D005394 ORTHO05D006909 2.4e-249 865.9 795 57.0
Medtr5g091250 Medicago truncatula HOM05D005394 ORTHO05D006909 7.0e-249 864.4 787 56.5
Psat0s1569g0040 Pisum sativum HOM05D005394 ORTHO05D006909 1.0e-247 860.5 787 56.7
Atru.BG.36.p Acer truncatum HOM05D005394 ORTHO05D006909 1.3e-247 860.1 787 57.8
HanXRQChr09g0276121 Helianthus annuus HOM05D005394 ORTHO05D006909 2.9e-247 859.0 790 56.8
Lsat_1_v5_gn_8_142320 Lactuca sativa HOM05D005394 ORTHO05D006909 1.5e-246 856.7 792 56.4
Prupe.3G175300 Prunus persica HOM05D005394 ORTHO05D006909 2.1e-245 852.8 786 56.2
RcHm_v2.0_Chr2g0151781 Rosa chinensis HOM05D005394 ORTHO05D006909 2.3e-244 849.4 785 56.1
PSO675G3098 Papaver somniferum HOM05D005394 ORTHO05D006909 6.8e-244 847.8 786 56.4
arahy.Tifrunner.gnm1.ann1.3I6JR3 Arachis hypogaea HOM05D005394 ORTHO05D006909 1.2e-243 847.0 790 56.5
EL10Ac9g22847 Beta vulgaris HOM05D005394 ORTHO05D006909 3.4e-243 845.5 795 55.5
PSO541G2917 Papaver somniferum HOM05D005394 ORTHO05D006909 4.4e-243 845.1 786 56.2
ClCG02G018460 Citrullus lanatus HOM05D005394 ORTHO05D006909 7.5e-243 844.3 800 55.5
TWI14G0801 Tripterygium wilfordii HOM05D005394 ORTHO05D006909 2.8e-242 842.4 789 55.5
Sopen10g003630 Solanum pennellii HOM05D005394 ORTHO05D006909 2.4e-241 839.3 789 54.5
Solyc10g007720.4 Solanum lycopersicum HOM05D005394 ORTHO05D006909 3.2e-241 839.0 789 54.2
arahy.Tifrunner.gnm1.ann1.C2BK4Q Arachis hypogaea HOM05D005394 ORTHO05D006909 5.4e-241 838.2 803 55.5
PGSC0003DMG400021243 Solanum tuberosum HOM05D005394 ORTHO05D006909 5.4e-241 838.2 789 54.2
CBR_g53704 Chara braunii HOM05D005394 ORTHO05D006909 2.0e-240 836.3 786 56.0
MD09G1149900 Malus domestica HOM05D005394 ORTHO05D006909 2.0e-240 836.3 791 55.4
Sabra05G0154700 Salix brachista HOM05D005394 ORTHO05D006909 2.0e-240 836.3 790 55.3
FvH4_6g38530 Fragaria vesca HOM05D005394 ORTHO05D006909 2.7e-240 835.9 785 55.2
FAN14G2062 Fragaria x ananassa HOM05D005394 ORTHO05D006909 2.7e-240 835.9 785 55.2
THA.LOC104825567 Tarenaya hassleriana HOM05D005394 ORTHO05D006909 2.7e-240 835.9 789 55.5
Sed0020842 Sechium edule HOM05D005394 ORTHO05D006909 5.9e-240 834.7 789 55.4
Peaxi162Scf00035g02520 Petunia axillaris HOM05D005394 ORTHO05D006909 7.8e-240 834.3 759 56.3
MSTRG.15035 Avicennia marina HOM05D005394 ORTHO05D006909 2.3e-239 832.8 789 55.0
FAN02G2503 Fragaria x ananassa HOM05D005394 ORTHO05D006909 5.0e-239 831.6 785 55.2
GSVIVG01020852001 Vitis vinifera HOM05D005394 ORTHO05D006909 5.0e-239 831.6 794 54.5
CsaV3_6G013780 Cucumis sativus L. HOM05D005394 ORTHO05D006909 8.6e-239 830.9 790 55.2
CDE02G3161 Ceratophyllum demersum HOM05D005394 ORTHO05D006909 1.9e-238 829.7 790 54.3
FAN05G5751 Fragaria x ananassa HOM05D005394 ORTHO05D006909 1.9e-238 829.7 785 54.9
FAN09G4660 Fragaria x ananassa HOM05D005394 ORTHO05D006909 4.3e-238 828.6 785 54.9
Manes.01G130300 Manihot esculenta HOM05D005394 ORTHO05D006909 4.7e-237 825.1 790 54.7
Phvul.008G193314 Phaseolus vulgaris HOM05D005394 ORTHO05D006909 4.0e-236 822.0 800 54.5
unitig_46.g18287 Utricularia gibba HOM05D005394 ORTHO05D006909 6.8e-236 821.2 798 53.6
MELO3C019674.2 Cucumis melo HOM05D005394 ORTHO05D006909 1.2e-235 820.5 797 54.6
Nitab4.5_0003104g0050 Nicotiana tabacum HOM05D005394 ORTHO05D006909 1.5e-235 820.1 789 53.5
CSS0015023 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 2.6e-235 819.3 759 57.0
Cc05_g09680 Coffea canephora HOM05D005394 ORTHO05D006909 2.6e-235 819.3 790 53.8
VMungo0647G2040 Vigna mungo HOM05D005394 ORTHO05D006909 2.6e-235 819.3 788 54.9
CSS0042292 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 5.8e-235 818.1 760 56.8
DCAR_009812 Daucus carota HOM05D005394 ORTHO05D006909 9.8e-235 817.4 809 52.9
COL.COLO4_10088 Corchorus olitorius HOM05D005394 ORTHO05D006909 6.4e-234 814.7 790 54.7
MD17G1137000 Malus domestica HOM05D005394 ORTHO05D006909 1.9e-233 813.1 755 56.0
Lalb_Chr17g0348211 Lupinus albus HOM05D005394 ORTHO05D006909 3.2e-233 812.4 790 54.2
Migut.E01770 Erythranthe guttata HOM05D005394 ORTHO05D006909 4.1e-233 812.0 784 53.7
Nitab4.5_0002209g0020 Nicotiana tabacum HOM05D005394 ORTHO05D006909 5.4e-233 811.6 789 53.5
Cfa023066 Carpinus fangiana HOM05D005394 ORTHO05D006909 2.3e-231 806.2 789 54.8
Oeu020932.1 Olea europaea HOM05D005394 ORTHO05D006909 2.3e-231 806.2 838 51.6
Gohir.A10G140600 Gossypium hirsutum HOM05D005394 ORTHO05D006909 3.0e-231 805.8 790 53.8
Ah.01g001930 Amaranthus hybridus HOM05D005394 ORTHO05D006909 1.1e-230 803.9 787 53.2
Thecc.04G175300 Theobroma cacao HOM05D005394 ORTHO05D006909 1.9e-230 803.1 812 52.7
C06p42040 Brassica napus HOM05D005394 ORTHO05D006909 3.3e-230 802.4 809 52.2
Potri.005G203900 Populus trichocarpa HOM05D005394 ORTHO05D006909 3.3e-230 802.4 790 53.4
Gorai.011G139100 Gossypium raimondii HOM05D005394 ORTHO05D006909 4.3e-230 802.0 790 53.7
PGR042G0197 Punica granatum HOM05D005394 ORTHO05D006909 4.3e-230 802.0 791 54.6
BcaC08g46216 Brassica carinata HOM05D005394 ORTHO05D006909 5.6e-230 801.6 809 52.0
BolC6t39222H Brassica oleracea HOM05D005394 ORTHO05D006909 1.6e-229 800.0 809 52.0
Manes.02G088100 Manihot esculenta HOM05D005394 ORTHO05D006909 1.6e-229 800.0 790 54.1
Sp5g22930 Schrenkiella parvula HOM05D005394 ORTHO05D006909 2.8e-229 799.3 787 53.4
Sed0013102 Sechium edule HOM05D005394 ORTHO05D006909 2.8e-229 799.3 790 54.1
Glyma.14G029500 Glycine max HOM05D005394 ORTHO05D006909 6.2e-229 798.1 789 53.9
AL2G26730 Arabidopsis lyrata HOM05D005394 ORTHO05D006909 8.0e-229 797.7 787 53.0
Gohir.D10G126100 Gossypium hirsutum HOM05D005394 ORTHO05D006909 4.0e-228 795.4 790 53.4
Aa31sc829G10 Aethionema arabicum HOM05D005394 ORTHO05D006909 2.0e-227 793.1 789 53.0
A07p34470 Brassica napus HOM05D005394 ORTHO05D006909 2.0e-227 793.1 809 51.5
Haze_13523 Corylus avellana HOM05D005394 ORTHO05D006909 2.6e-227 792.7 898 49.8
LjContig00049g0014840 Lotus japonicus HOM05D005394 ORTHO05D006909 2.6e-227 792.7 758 55.0
BolC6t38908H Brassica oleracea HOM05D005394 ORTHO05D006909 9.8e-227 790.8 788 52.2
Glyma.02G286300 Glycine max HOM05D005394 ORTHO05D006909 9.8e-227 790.8 758 55.4
SGA_v2.0_scaffold4G02121 Striga asiatica HOM05D005394 ORTHO05D006909 1.3e-226 790.4 863 50.3
CANSAT64G3008 Cannabis sativa HOM05D005394 ORTHO05D006909 8.3e-226 787.7 789 53.5
Carub.0002s1442 Capsella rubella HOM05D005394 ORTHO05D006909 1.9e-225 786.6 787 52.1
BcaC08g46016 Brassica carinata HOM05D005394 ORTHO05D006909 2.1e-224 783.1 788 51.8
C06p38110 Brassica napus HOM05D005394 ORTHO05D006909 2.1e-224 783.1 788 51.8
CARHR060570 Cardamine hirsuta HOM05D005394 ORTHO05D006909 2.1e-224 783.1 788 52.0
CiPaw.03G191600 Carya illinoinensis HOM05D005394 ORTHO05D006909 6.0e-224 781.6 757 55.0
AT1G67930 Arabidopsis thaliana HOM05D005394 ORTHO05D006909 7.8e-224 781.2 787 52.0
BcaB03g15386 Brassica carinata HOM05D005394 ORTHO05D006909 4.3e-222 775.4 758 52.9
Potri.002G058300 Populus trichocarpa HOM05D005394 ORTHO05D006909 4.3e-222 775.4 789 52.5
QL08p044839 Quercus lobata HOM05D005394 ORTHO05D006909 1.2e-221 773.9 827 51.5
HPP92_002195 Vanilla planifolia HOM05D005394 ORTHO05D006909 1.6e-221 773.5 785 51.7
Duzib212G0967 Durio zibethinus HOM05D005394 ORTHO05D006909 6.8e-220 768.1 790 52.4
ATR0605G001 Amborella trichopoda HOM05D005394 ORTHO05D006909 8.9e-220 767.7 765 52.7
ECA233G4606 Erigeron canadensis HOM05D005394 ORTHO05D006909 1.5e-219 766.9 757 53.9
Sabra02G0047500 Salix brachista HOM05D005394 ORTHO05D006909 3.4e-219 765.8 787 53.0
BraA07t31074Z Brassica rapa HOM05D005394 ORTHO05D006909 5.8e-219 765.0 732 53.8
SHI02103 Sapria himalayana HOM05D005394 ORTHO05D006909 1.7e-215 753.4 792 51.4
Eucgr.A02013 Eucalyptus grandis HOM05D005394 ORTHO05D006909 2.2e-210 736.5 670 57.3
AUR62015139 Chenopodium quinoa HOM05D005394 ORTHO05D006909 4.9e-210 735.3 647 58.0
AUR62017599 Chenopodium quinoa HOM05D005394 ORTHO05D006909 3.5e-208 729.2 647 57.7
BcaB03g15148 Brassica carinata HOM05D005394 ORTHO05D006909 3.0e-207 726.1 669 55.2
Zm00001eb286850 Zea mays HOM05D005394 ORTHO05D006909 1.7e-199 700.3 807 48.5
Lj1A601G23 Lonicera japonica HOM05D005394 ORTHO05D006909 8.7e-199 698.0 637 56.2
Thhalv10018283m.g Eutrema salsugineum HOM05D005394 ORTHO05D006909 1.1e-198 697.6 621 55.7
vmacro00998 Vaccinium macrocarpon HOM05D005394 ORTHO05D006909 6.9e-196 688.3 867 45.9
CAN.G2018.3 Capsicum annuum HOM05D005394 ORTHO05D006909 9.6e-190 667.9 572 58.2
Rhsim12G0008000 Rhododendron simsii HOM05D005394 ORTHO05D006909 1.1e-161 574.7 781 43.8
Actinidia25071 Actinidia chinensis HOM05D005394 ORTHO05D006909 4.0e-143 513.1 800 42.0
Cpa.g.sc2.203 Carica papaya HOM05D005394 ORTHO05D006909 2.0e-142 510.8 426 60.1
Cre17.g721900 Chlamydomonas reinhardtii HOM05D005394 ORTHO05D006909 7.0e-132 475.7 785 37.6
PRCOL_00001583 Prasinoderma coloniale HOM05D005394 ORTHO05D006909 1.6e-131 474.6 794 36.9
Actinidia12539 Actinidia chinensis HOM05D005394 ORTHO05D006909 2.1e-112 411.0 435 52.0
Oeu033979.1 Olea europaea HOM05D005394 ORTHO05D006909 2.9e-109 400.6 476 46.8
MCO08G047 Micromonas commoda HOM05D005394 ORTHO05D006909 2.1e-104 384.4 853 33.3
MBI10_g36386_MAGBIO Magnolia biondii HOM05D005394 ORTHO05D006909 2.4e-100 370.9 377 52.8
Atru.chr6.2063 Acer truncatum HOM05D005394 ORTHO05D006909 4.0e-95 353.6 321 57.0
CDE09G0652 Ceratophyllum demersum HOM05D005394 ORTHO05D006909 1.9e-92 344.7 302 57.0
MBI10_g36389_MAGBIO Magnolia biondii HOM05D005394 ORTHO05D006909 2.0e-86 324.7 259 62.2
Cpa.g.sc2.200 Carica papaya HOM05D005394 ORTHO05D006909 2.6e-70 271.2 329 48.0
Actinidia12538 Actinidia chinensis HOM05D005394 ORTHO05D006909 2.2e-69 268.1 283 55.1
CSS0027861 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 6.3e-48 196.8 309 43.7
DCAR_032393 Daucus carota HOM05D005394 ORTHO05D011132 7.0e-39 166.8 143 58.7
Haze_13526 Corylus avellana HOM05D005394 ORTHO05D006909 1.5e-36 159.1 309 36.9
HanXRQChr14g0428721 Helianthus annuus HOM05D005394 ORTHO05D006909 1.3e-32 146.0 129 56.6
BcaB01g03482 Brassica carinata HOM05D005394 ORTHO05D006909 2.9e-29 134.8 135 48.1
CSS0047075 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 6.8e-26 123.6 147 46.9
CSS0003150 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 8.8e-26 123.2 147 45.6
CSS0006481 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 7.0e-23 113.6 142 43.7
CSS0027532 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 8.0e-19 100.1 158 38.6
unitig_748.g8066 Utricularia gibba HOM05D005394 ORTHO05D006909 1.0e-13 83.2 121 44.6
Actinidia12535 Actinidia chinensis HOM05D005394 ORTHO05D055987 1.6e-06 59.3 62 48.4
BcaB01g03481 Brassica carinata HOM05D005394 ORTHO05D006909 3.5e-06 58.2 110 40.0


User provided reference genes

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