Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO266G0004 Selaginella moellendorffii HOM05D004030 ORTHO05D004952 1.6e-164 582.8 316 100.0
SEGI_23147 Sequoiadendron giganteum HOM05D004030 ORTHO05D004952 6.7e-46 188.7 408 36.5
ATR0824G134 Amborella trichopoda HOM05D004030 ORTHO05D004952 2.0e-42 177.2 310 40.3
Dinv16793 Davidia involucrata HOM05D004030 ORTHO05D004952 7.7e-42 175.3 323 39.0
TAR627G0229 Trochodendron aralioides HOM05D004030 ORTHO05D004952 2.5e-40 170.2 329 38.3
HanXRQChr11g0350521 Helianthus annuus HOM05D004030 ORTHO05D004952 5.5e-40 169.1 308 39.6
GSVIVG01021235001 Vitis vinifera HOM05D004030 ORTHO05D004952 1.2e-39 167.9 319 39.8
Eucgr.E02762 Eucalyptus grandis HOM05D004030 ORTHO05D004952 2.7e-39 166.8 315 38.7
Sed0004310 Sechium edule HOM05D004030 ORTHO05D004952 4.7e-39 166.0 313 38.3
CAN.G411.88 Capsicum annuum HOM05D004030 ORTHO05D004952 6.1e-39 165.6 312 39.4
Solyc02g072510.3 Solanum lycopersicum HOM05D004030 ORTHO05D004952 1.0e-38 164.9 315 41.0
Sopen02g021480 Solanum pennellii HOM05D004030 ORTHO05D004952 1.0e-38 164.9 315 41.0
AagrBONN_evm.TU.Sc2ySwM_362.2754 Anthoceros agrestis HOM05D004030 ORTHO05D004952 1.4e-38 164.5 260 41.2
PGR031G0618 Punica granatum HOM05D004030 ORTHO05D004952 1.4e-38 164.5 329 37.4
CDE10G0195 Ceratophyllum demersum HOM05D004030 ORTHO05D004952 1.8e-38 164.1 214 44.9
AUR62027698 Chenopodium quinoa HOM05D004030 ORTHO05D004952 1.8e-38 164.1 211 46.0
AUR62031227 Chenopodium quinoa HOM05D004030 ORTHO05D004952 1.8e-38 164.1 191 48.2
Ciclev10015509m.g Citrus clementina HOM05D004030 ORTHO05D004952 1.8e-38 164.1 308 40.3
Thecc.06G168200 Theobroma cacao HOM05D004030 ORTHO05D004952 3.9e-38 162.9 307 39.4
CSS0010331 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 5.1e-38 162.5 323 37.8
Duzib235G1256 Durio zibethinus HOM05D004030 ORTHO05D004952 5.1e-38 162.5 308 39.0
MBI07_g09555_MAGBIO Magnolia biondii HOM05D004030 ORTHO05D004952 5.1e-38 162.5 215 45.6
AagrBONN_evm.TU.Sc2ySwM_344.2041 Anthoceros agrestis HOM05D004030 ORTHO05D004952 6.7e-38 162.2 309 39.5
CARHR028550 Cardamine hirsuta HOM05D004030 ORTHO05D004952 8.8e-38 161.8 333 38.1
PGSC0003DMG400028477 Solanum tuberosum HOM05D004030 ORTHO05D004952 8.8e-38 161.8 313 39.0
AL1G42980 Arabidopsis lyrata HOM05D004030 ORTHO05D004952 1.5e-37 161.0 343 40.5
BcaB07g32509 Brassica carinata HOM05D004030 ORTHO05D004952 1.5e-37 161.0 331 37.8
COL.COLO4_31267 Corchorus olitorius HOM05D004030 ORTHO05D004952 1.5e-37 161.0 317 36.9
CsaV3_1G033240 Cucumis sativus L. HOM05D004030 ORTHO05D004952 1.5e-37 161.0 313 37.1
PSO782G4674 Papaver somniferum HOM05D004030 ORTHO05D004952 1.5e-37 161.0 264 41.3
Gohir.A10G036100 Gossypium hirsutum HOM05D004030 ORTHO05D004952 2.0e-37 160.6 302 40.7
A09p37120 Brassica napus HOM05D004030 ORTHO05D004952 2.6e-37 160.2 317 39.1
Carub.0001s2743 Capsella rubella HOM05D004030 ORTHO05D004952 2.6e-37 160.2 337 38.6
MELO3C002663.2 Cucumis melo HOM05D004030 ORTHO05D004952 2.6e-37 160.2 313 38.7
Aqoxy1G02017 Aquilegia oxysepala HOM05D004030 ORTHO05D004952 3.3e-37 159.8 213 43.2
Thhalv10008084m.g Eutrema salsugineum HOM05D004030 ORTHO05D004952 3.3e-37 159.8 331 38.1
ECA248G1387 Erigeron canadensis HOM05D004030 ORTHO05D004952 5.7e-37 159.1 315 38.1
PSO063G1415 Papaver somniferum HOM05D004030 ORTHO05D004952 5.7e-37 159.1 264 41.3
CANSAT80G0365 Cannabis sativa HOM05D004030 ORTHO05D004952 7.4e-37 158.7 320 38.1
EL10Ac8g20580 Beta vulgaris HOM05D004030 ORTHO05D004952 9.7e-37 158.3 319 35.7
Rhsim13G0189000 Rhododendron simsii HOM05D004030 ORTHO05D004952 9.7e-37 158.3 294 39.1
Peaxi162Scf00302g00311 Petunia axillaris HOM05D004030 ORTHO05D004952 1.3e-36 157.9 320 38.1
Gohir.D10G036800 Gossypium hirsutum HOM05D004030 ORTHO05D004952 1.7e-36 157.5 302 39.4
Gorai.011G038700 Gossypium raimondii HOM05D004030 ORTHO05D004952 1.7e-36 157.5 306 40.2
Sp1g25170 Schrenkiella parvula HOM05D004030 ORTHO05D004952 1.7e-36 157.5 336 37.8
Ah.09g233420 Amaranthus hybridus HOM05D004030 ORTHO05D004952 2.8e-36 156.8 296 37.2
BcaC05g26946 Brassica carinata HOM05D004030 ORTHO05D004952 2.8e-36 156.8 329 40.1
C05p27930 Brassica napus HOM05D004030 ORTHO05D004952 2.8e-36 156.8 329 40.1
Mapoly0022s0014 Marchantia polymorpha HOM05D004030 ORTHO05D004952 2.8e-36 156.8 397 34.5
Aa31LG6G6290 Aethionema arabicum HOM05D004030 ORTHO05D004952 6.3e-36 155.6 343 37.0
THA.LOC104820602 Tarenaya hassleriana HOM05D004030 ORTHO05D004952 6.3e-36 155.6 319 39.8
Cfa013812 Carpinus fangiana HOM05D004030 ORTHO05D004952 1.1e-35 154.8 311 37.3
Glyma.04G063400 Glycine max HOM05D004030 ORTHO05D004952 1.1e-35 154.8 219 43.8
ClCG03G007580 Citrullus lanatus HOM05D004030 ORTHO05D004952 1.4e-35 154.5 314 36.9
Lalb_Chr18g0054631 Lupinus albus HOM05D004030 ORTHO05D004952 1.8e-35 154.1 292 37.7
AT1G29220 Arabidopsis thaliana HOM05D004030 ORTHO05D004952 2.4e-35 153.7 350 37.7
BraA09t39228Z Brassica rapa HOM05D004030 ORTHO05D004952 3.1e-35 153.3 323 38.4
DCAR_005202 Daucus carota HOM05D004030 ORTHO05D004952 3.1e-35 153.3 266 38.7
Prupe.4G063800 Prunus persica HOM05D004030 ORTHO05D004952 5.3e-35 152.5 312 37.5
Hund21166 Selenicereus undatus HOM05D004030 ORTHO05D004952 5.3e-35 152.5 218 41.7
Actinidia16784 Actinidia chinensis HOM05D004030 ORTHO05D004952 7.0e-35 152.1 318 36.5
Nn3g19533 Nelumbo nucifera HOM05D004030 ORTHO05D004952 7.0e-35 152.1 318 36.5
Cc02_g15190 Coffea canephora HOM05D004030 ORTHO05D004952 9.1e-35 151.8 327 36.7
Manes.16G041300 Manihot esculenta HOM05D004030 ORTHO05D004952 9.1e-35 151.8 290 37.6
Lj6g0006857 Lotus japonicus HOM05D004030 ORTHO05D004952 1.2e-34 151.4 307 37.1
Ca_10308_v3 Cicer arietinum L. HOM05D004030 ORTHO05D004952 1.5e-34 151.0 219 43.4
arahy.Tifrunner.gnm1.ann1.6TT57W Arachis hypogaea HOM05D004030 ORTHO05D004952 2.6e-34 150.2 299 36.8
DCAR_020881 Daucus carota HOM05D004030 ORTHO05D004952 2.6e-34 150.2 268 39.9
Dinv40699 Davidia involucrata HOM05D004030 ORTHO05D004952 2.6e-34 150.2 257 40.5
FvH4_3g07540 Fragaria vesca HOM05D004030 ORTHO05D004952 2.6e-34 150.2 272 37.1
FAN11G3556 Fragaria x ananassa HOM05D004030 ORTHO05D004952 2.6e-34 150.2 272 37.1
arahy.Tifrunner.gnm1.ann1.M207AG Arachis hypogaea HOM05D004030 ORTHO05D004952 3.5e-34 149.8 220 42.3
Haze_22485 Corylus avellana HOM05D004030 ORTHO05D004952 3.5e-34 149.8 295 38.6
Os01g0759700 Oryza sativa ssp. japonica HOM05D004030 ORTHO05D004952 3.5e-34 149.8 320 35.9
HPP92_021480 Vanilla planifolia HOM05D004030 ORTHO05D004952 3.5e-34 149.8 224 39.3
Potri.011G068100 Populus trichocarpa HOM05D004030 ORTHO05D004952 4.5e-34 149.4 310 39.7
BolC5t31519H Brassica oleracea HOM05D004030 ORTHO05D004952 1.3e-33 147.9 345 38.3
RcHm_v2.0_Chr5g0011231 Rosa chinensis HOM05D004030 ORTHO05D004952 1.3e-33 147.9 273 37.4
CiPaw.09G071100 Carya illinoinensis HOM05D004030 ORTHO05D004952 1.7e-33 147.5 322 37.3
Medtr1g087790 Medicago truncatula HOM05D004030 ORTHO05D004952 2.2e-33 147.1 225 43.1
Phvul.009G089700 Phaseolus vulgaris HOM05D004030 ORTHO05D004952 3.8e-33 146.4 320 35.6
FAN25G0294 Fragaria x ananassa HOM05D004030 ORTHO05D004952 8.5e-33 145.2 274 36.5
Manes.17G057500 Manihot esculenta HOM05D004030 ORTHO05D004952 8.5e-33 145.2 302 37.7
VMungo1309G1983 Vigna mungo HOM05D004030 ORTHO05D004952 8.5e-33 145.2 336 33.9
Atru.chr10.1642 Acer truncatum HOM05D004030 ORTHO05D004952 1.5e-32 144.4 197 44.7
Glyma.06G064600 Glycine max HOM05D004030 ORTHO05D004952 1.5e-32 144.4 275 35.6
FAN21G1198 Fragaria x ananassa HOM05D004030 ORTHO05D004952 1.9e-32 144.1 270 37.0
Migut.M01023 Erythranthe guttata HOM05D004030 ORTHO05D004952 2.5e-32 143.7 239 39.7
SGA_v2.0_scaffold1G00064 Striga asiatica HOM05D004030 ORTHO05D004952 2.5e-32 143.7 352 33.5
Potri.004G058700 Populus trichocarpa HOM05D004030 ORTHO05D004952 5.5e-32 142.5 313 38.3
QL05p048142 Quercus lobata HOM05D004030 ORTHO05D004952 5.5e-32 142.5 292 38.4
Duzib160G0274 Durio zibethinus HOM05D004030 ORTHO05D004952 7.2e-32 142.1 312 36.9
Psat6g163160 Pisum sativum HOM05D004030 ORTHO05D004952 7.2e-32 142.1 162 48.8
FAN16G1462 Fragaria x ananassa HOM05D004030 ORTHO05D004952 9.4e-32 141.7 181 43.1
Sabra11G0049100 Salix brachista HOM05D004030 ORTHO05D004952 9.4e-32 141.7 219 43.4
MD05G1298600 Malus domestica HOM05D004030 ORTHO05D004952 1.2e-31 141.4 307 36.8
FvH4_3g37800 Fragaria vesca HOM05D004030 ORTHO05D004952 1.6e-31 141.0 265 37.0
Lsat_1_v5_gn_1_111240 Lactuca sativa HOM05D004030 ORTHO05D004952 2.1e-31 140.6 315 36.2
FAN11G0126 Fragaria x ananassa HOM05D004030 ORTHO05D004952 2.7e-31 140.2 265 37.0
Zm00001eb370530 Zea mays HOM05D004030 ORTHO05D004952 2.7e-31 140.2 323 36.2
MD10G1277900 Malus domestica HOM05D004030 ORTHO05D004952 4.7e-31 139.4 301 37.2
Nn1g02598 Nelumbo nucifera HOM05D004030 ORTHO05D004952 6.1e-31 139.0 263 38.8
Nitab4.5_0005171g0040 Nicotiana tabacum HOM05D004030 ORTHO05D004952 8.0e-31 138.7 322 34.8
Oeu043115.1 Olea europaea HOM05D004030 ORTHO05D004952 1.8e-30 137.5 308 35.7
Sc07g0007700 Simmondsia chinensis HOM05D004030 ORTHO05D004952 1.8e-30 137.5 225 38.7
Haze_06204 Corylus avellana HOM05D004030 ORTHO05D004952 2.3e-30 137.1 320 37.2
Nitab4.5_0007465g0050 Nicotiana tabacum HOM05D004030 ORTHO05D004952 4.0e-30 136.3 320 34.7
Cfa000628 Carpinus fangiana HOM05D004030 ORTHO05D004952 6.7e-30 135.6 330 37.3
TPR.G40724 Trifolium pratense HOM05D004030 ORTHO05D004952 3.3e-29 133.3 181 46.4
HPP92_010042 Vanilla planifolia HOM05D004030 ORTHO05D004952 4.4e-29 132.9 158 42.4
TWI39G0053 Tripterygium wilfordii HOM05D004030 ORTHO05D004952 9.7e-29 131.7 323 33.1
TWI63G1163 Tripterygium wilfordii HOM05D004030 ORTHO05D004952 3.7e-28 129.8 293 37.2
arahy.Tifrunner.gnm1.ann1.HYDG6Q Arachis hypogaea HOM05D004030 ORTHO05D004952 3.1e-27 126.7 356 32.0
arahy.Tifrunner.gnm1.ann1.G7P63M Arachis hypogaea HOM05D004030 ORTHO05D004952 4.1e-27 126.3 352 32.4
SalBow8G0896 Salvia bowleyana HOM05D004030 ORTHO05D004952 1.2e-26 124.8 371 31.3
arahy.Tifrunner.gnm1.ann1.JIP48Q Arachis hypogaea HOM05D004030 ORTHO05D004952 2.0e-26 124.0 193 39.4
SHI28530 Sapria himalayana HOM05D004030 ORTHO05D004952 5.9e-26 122.5 160 40.6
Lalb_Chr15g0086161 Lupinus albus HOM05D004030 ORTHO05D004952 1.9e-24 117.5 176 42.0
vmacro03922 Vaccinium macrocarpon HOM05D004030 ORTHO05D004952 1.9e-24 117.5 307 30.9
Ah.16g107150 Amaranthus hybridus HOM05D004030 ORTHO05D004952 2.5e-24 117.1 187 38.5
Sabra04G0038000 Salix brachista HOM05D004030 ORTHO05D004952 2.5e-24 117.1 196 41.3
arahy.Tifrunner.gnm1.ann1.LWKQ47 Arachis hypogaea HOM05D004030 ORTHO05D004952 1.6e-23 114.4 106 51.9
Peaxi162Scf00912g00019 Petunia axillaris HOM05D004030 ORTHO05D004952 4.7e-23 112.8 111 52.3
COL.COLO4_06310 Corchorus olitorius HOM05D004030 ORTHO05D004952 6.1e-23 112.5 280 33.9
SalBow5G1441 Salvia bowleyana HOM05D004030 ORTHO05D004952 1.8e-22 110.9 201 38.3
Pp3c22_6900 Physcomitrium patens HOM05D004030 ORTHO05D004952 2.3e-22 110.5 88 52.3
Zm00001eb152490 Zea mays HOM05D004030 ORTHO05D004952 2.0e-21 107.5 85 55.3
Lj1A1189T62 Lonicera japonica HOM05D004030 ORTHO05D004952 2.2e-20 104.0 183 40.4
Pp3c21_660 Physcomitrium patens HOM05D004030 ORTHO05D004952 6.3e-20 102.4 290 33.1
SalBow5G5223 Salvia bowleyana HOM05D004030 ORTHO05D004952 1.4e-19 101.3 72 62.5
CBR_g31948 Chara braunii HOM05D004030 ORTHO05D004952 2.4e-19 100.5 119 45.4
Nitab4.5_0004602g0020 Nicotiana tabacum HOM05D004030 ORTHO05D004952 5.4e-19 99.4 110 50.9
Lsat_1_v5_gn_6_74880 Lactuca sativa HOM05D004030 ORTHO05D004952 9.1e-19 98.6 266 30.1
CAN.G566.51 Capsicum annuum HOM05D004030 ORTHO05D004952 1.6e-18 97.8 160 38.8
Nitab4.5_0000271g0330 Nicotiana tabacum HOM05D004030 ORTHO05D004952 4.5e-18 96.3 184 41.8
Ah.16g108320 Amaranthus hybridus HOM05D004030 ORTHO05D004952 1.0e-17 95.1 69 56.5
CSS0023477 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 1.7e-17 94.4 69 56.5
CSS0003365 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 6.5e-17 92.4 69 55.1
BcaB03g13895 Brassica carinata HOM05D004030 ORTHO05D004952 9.4e-16 88.6 164 37.2
Aqoxy2G00428 Aquilegia oxysepala HOM05D004030 ORTHO05D004952 8.8e-14 82.0 157 36.3
MCO08G144 Micromonas commoda HOM05D004030 ORTHO05D004952 4.4e-13 79.7 99 39.4
Actinidia35586 Actinidia chinensis HOM05D004030 ORTHO05D004952 7.5e-13 79.0 293 31.1
SGA_v2.0_scaffold16G07708 Striga asiatica HOM05D004030 ORTHO05D004952 1.1e-11 75.1 62 56.5


User provided reference genes

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