Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO265G0021 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 1.1e-184 649.8 328 100.0
SMO143G0192 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 1.8e-62 243.8 127 96.9
SMO186G0008 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 1.2e-58 231.1 127 92.1
SMO143G0243 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 8.2e-55 218.4 127 87.4
SMO327G0007 Selaginella moellendorffii HOM05D003498 ORTHO05D379411 4.5e-53 212.6 121 95.0
SMO334G0059 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 4.1e-30 136.3 104 71.2
SMO327G0030 Selaginella moellendorffii HOM05D003498 ORTHO05D003393 3.8e-20 103.2 167 47.3
TAR622G1172 Trochodendron aralioides HOM05D006847 ORTHO05D008685 1.5e-19 101.3 109 45.0
Nn4g23574 Nelumbo nucifera HOM05D006847 ORTHO05D008685 5.6e-19 99.4 108 45.4
SEGI_24845 Sequoiadendron giganteum HOM05D006847 ORTHO05D008685 1.2e-18 98.2 110 45.5
Dinv33999 Davidia involucrata HOM05D006847 ORTHO05D008685 8.0e-18 95.5 110 41.8
TAR374G0132 Trochodendron aralioides HOM05D006847 ORTHO05D008685 1.0e-17 95.1 107 43.0
Ciclev10031661m.g Citrus clementina HOM05D006847 ORTHO05D008685 1.8e-17 94.4 109 42.2
Eucgr.G02408 Eucalyptus grandis HOM05D006847 ORTHO05D008685 3.0e-17 93.6 110 41.8
LjContig00408g0014580 Lotus japonicus HOM05D006847 ORTHO05D008685 4.0e-17 93.2 103 45.6
Pp3c6_17060 Physcomitrium patens HOM05D006847 ORTHO05D008685 4.0e-17 93.2 107 45.8
Potri.008G113000 Populus trichocarpa HOM05D006847 ORTHO05D008685 8.9e-17 92.0 114 40.4
Nitab4.5_0000259g0050 Nicotiana tabacum HOM05D006847 ORTHO05D008685 1.5e-16 91.3 107 42.1
RcHm_v2.0_Chr4g0437071 Rosa chinensis HOM05D006847 ORTHO05D008685 1.5e-16 91.3 106 42.5
CAN.G869.31 Capsicum annuum HOM05D006847 ORTHO05D008685 2.0e-16 90.9 112 39.3
Hma1.2p1_1348F.1_g277280 Hydrangea macrophylla HOM05D006847 ORTHO05D008685 2.6e-16 90.5 109 42.2
ATR0691G250 Amborella trichopoda HOM05D006847 ORTHO05D008685 3.4e-16 90.1 108 40.7
GSVIVG01010124001 Vitis vinifera HOM05D006847 ORTHO05D008685 3.4e-16 90.1 110 40.9
Actinidia24040 Actinidia chinensis HOM05D006847 ORTHO05D008685 4.4e-16 89.7 112 41.1
CSS0010285 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 4.4e-16 89.7 105 41.9
COL.COLO4_27774 Corchorus olitorius HOM05D006847 ORTHO05D008685 4.4e-16 89.7 116 39.7
FvH4_4g28930 Fragaria vesca HOM05D006847 ORTHO05D008685 4.4e-16 89.7 116 41.4
Potri.010G136300 Populus trichocarpa HOM05D006847 ORTHO05D008685 4.4e-16 89.7 114 39.5
Duzib268G0361 Durio zibethinus HOM05D006847 ORTHO05D008685 5.7e-16 89.4 110 40.9
CiPaw.06G095800 Carya illinoinensis HOM05D006847 ORTHO05D008685 7.5e-16 89.0 110 42.7
Cc11_g11380 Coffea canephora HOM05D006847 ORTHO05D008685 7.5e-16 89.0 106 42.5
Thecc.02G320200 Theobroma cacao HOM05D006847 ORTHO05D008685 9.8e-16 88.6 116 39.7
Ca_22680_v3 Cicer arietinum L. HOM05D006847 ORTHO05D008685 1.3e-15 88.2 116 43.1
Lj3C1026T6 Lonicera japonica HOM05D006847 ORTHO05D008685 1.3e-15 88.2 114 38.6
MD13G1054900 Malus domestica HOM05D006847 ORTHO05D008685 1.3e-15 88.2 109 40.4
Oeu001640.1 Olea europaea HOM05D006847 ORTHO05D008685 1.3e-15 88.2 108 41.7
Cfa008830 Carpinus fangiana HOM05D006847 ORTHO05D008685 1.7e-15 87.8 109 40.4
Migut.L01151 Erythranthe guttata HOM05D006847 ORTHO05D008685 1.7e-15 87.8 108 42.6
Manes.14G092000 Manihot esculenta HOM05D006847 ORTHO05D008685 1.7e-15 87.8 110 39.1
Medtr8g065720 Medicago truncatula HOM05D006847 ORTHO05D008685 2.2e-15 87.4 116 41.4
Pp3c5_12950 Physcomitrium patens HOM05D006847 ORTHO05D008685 2.2e-15 87.4 104 44.2
CANSAT64G2316 Cannabis sativa HOM05D006847 ORTHO05D008685 2.9e-15 87.0 110 40.0
Pp3c27_4530 Physcomitrium patens HOM05D006847 ORTHO05D008685 2.9e-15 87.0 101 46.5
SalBow2G2641 Salvia bowleyana HOM05D006847 ORTHO05D008685 2.9e-15 87.0 103 42.7
MD16G1053800 Malus domestica HOM05D006847 ORTHO05D008685 3.7e-15 86.7 109 39.4
Haze_11844 Corylus avellana HOM05D006847 ORTHO05D008685 4.9e-15 86.3 109 41.3
Migut.N00803 Erythranthe guttata HOM05D006847 ORTHO05D008685 4.9e-15 86.3 106 44.3
Solyc05g010640.3 Solanum lycopersicum HOM05D006847 ORTHO05D008685 4.9e-15 86.3 102 40.2
Atru.chr11.1527 Acer truncatum HOM05D006847 ORTHO05D008685 6.4e-15 85.9 110 38.2
Gohir.A03G107200 Gossypium hirsutum HOM05D006847 ORTHO05D008685 6.4e-15 85.9 116 38.8
Mapoly0024s0128 Marchantia polymorpha HOM05D006847 ORTHO05D008685 6.4e-15 85.9 108 41.7
Nitab4.5_0002309g0040 Nicotiana tabacum HOM05D006847 ORTHO05D008685 6.4e-15 85.9 107 39.3
PGR119G0337 Punica granatum HOM05D006847 ORTHO05D008685 8.3e-15 85.5 106 43.4
Gorai.005G148200 Gossypium raimondii HOM05D006847 ORTHO05D008685 1.4e-14 84.7 116 37.9
Psat4g123400 Pisum sativum HOM05D006847 ORTHO05D008685 1.4e-14 84.7 103 42.7
MELO3C012175.2 Cucumis melo HOM05D006847 ORTHO05D008685 1.8e-14 84.3 110 39.1
PGSC0003DMG400019650 Solanum tuberosum HOM05D006847 ORTHO05D008685 1.8e-14 84.3 102 39.2
TWI75G1304 Tripterygium wilfordii HOM05D006847 ORTHO05D008685 1.8e-14 84.3 115 37.4
ClCG05G023430 Citrullus lanatus HOM05D006847 ORTHO05D008685 2.4e-14 84.0 110 38.2
CsaV3_5G033580 Cucumis sativus L. HOM05D006847 ORTHO05D008685 2.4e-14 84.0 110 39.1
ECA233G1196 Erigeron canadensis HOM05D006847 ORTHO05D008685 2.4e-14 84.0 103 42.7
Sopen05g006440 Solanum pennellii HOM05D006847 ORTHO05D008685 2.4e-14 84.0 102 39.2
Peaxi162Scf00188g00923 Petunia axillaris HOM05D006847 ORTHO05D008685 3.2e-14 83.6 107 39.3
MBI14_g08222_MAGBIO Magnolia biondii HOM05D006847 ORTHO05D008685 4.1e-14 83.2 108 36.1
Aqoxy3G00572 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 5.4e-14 82.8 102 39.2
MSTRG.7721 Avicennia marina HOM05D006847 ORTHO05D008685 5.4e-14 82.8 100 42.0
CSS0043445 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D000152 5.4e-14 82.8 102 41.2
HanXRQChr08g0215061 Helianthus annuus HOM05D006847 ORTHO05D008685 7.0e-14 82.4 103 41.7
Glyma.02G124600 Glycine max HOM05D006847 ORTHO05D008685 9.2e-14 82.0 103 40.8
Lj6C772T8 Lonicera japonica HOM05D006847 ORTHO05D008685 9.2e-14 82.0 103 40.8
Sed0008138 Sechium edule HOM05D006847 ORTHO05D008685 1.6e-13 81.3 110 37.3
Sopen01g032850 Solanum pennellii HOM05D006847 ORTHO05D008685 1.6e-13 81.3 102 39.2
HPP92_020537 Vanilla planifolia HOM05D006847 ORTHO05D008685 1.6e-13 81.3 103 42.7
SMO203G0194 Selaginella moellendorffii HOM05D003498 ORTHO05D378116 2.0e-13 80.9 131 49.6
DCAR_023729 Daucus carota HOM05D006847 ORTHO05D008685 2.7e-13 80.5 103 40.8
Aqoxy3G03766 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 3.5e-13 80.1 108 36.1
arahy.Tifrunner.gnm1.ann1.B51XMH Arachis hypogaea HOM05D006847 ORTHO05D008685 4.6e-13 79.7 103 38.8
Lj2g0006896 Lotus japonicus HOM05D006847 ORTHO05D008685 4.6e-13 79.7 103 38.8
Lsat_1_v5_gn_8_36700 Lactuca sativa HOM05D006847 ORTHO05D008685 5.9e-13 79.3 103 39.8
PGSC0003DMG400001803 Solanum tuberosum HOM05D006847 ORTHO05D008685 5.9e-13 79.3 107 39.3
arahy.Tifrunner.gnm1.ann1.9XA9EY Arachis hypogaea HOM05D006847 ORTHO05D008685 1.0e-12 78.6 103 38.8
FAN12G2539 Fragaria x ananassa HOM05D006847 ORTHO05D008685 1.3e-12 78.2 135 35.6
FAN17G2474 Fragaria x ananassa HOM05D006847 ORTHO05D008685 1.3e-12 78.2 135 35.6
Medtr0328s0040 Medicago truncatula HOM05D006847 ORTHO05D008685 1.3e-12 78.2 119 37.8
Sed0007808 Sechium edule HOM05D006847 ORTHO05D008685 1.7e-12 77.8 109 35.8
Oeu021813.1 Olea europaea HOM05D006847 ORTHO05D008685 3.9e-12 76.6 102 39.2
AagrBONN_evm.TU.Sc2ySwM_368.2780 Anthoceros agrestis HOM05D006847 ORTHO05D008685 8.6e-12 75.5 102 38.2
FAN22G0943 Fragaria x ananassa HOM05D006847 ORTHO05D008685 8.6e-12 75.5 126 35.7
HPP92_020469 Vanilla planifolia HOM05D006847 ORTHO05D008685 8.6e-12 75.5 103 39.8
Pp3c3_23290 Physcomitrium patens HOM05D006847 ORTHO05D008685 1.9e-11 74.3 108 38.0
TPR.G29773 Trifolium pratense HOM05D006847 ORTHO05D008685 7.3e-11 72.4 121 35.5
Pp3c4_7760 Physcomitrium patens HOM05D006847 ORTHO05D008685 1.6e-10 71.2 102 39.2
TPR.G20006 Trifolium pratense HOM05D006847 ORTHO05D008685 1.6e-10 71.2 103 37.9
Ca_05192_v3 Cicer arietinum L. HOM05D006847 ORTHO05D008685 3.6e-10 70.1 100 38.0
Psat2g097480 Pisum sativum HOM05D006847 ORTHO05D008685 4.7e-10 69.7 103 35.9
CSS0029748 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 1.3e-07 61.6 136 29.4
Gohir.D02G132300 Gossypium hirsutum HOM05D006847 ORTHO05D008685 1.3e-07 61.6 75 38.7
HPP92_026164 Vanilla planifolia HOM05D006847 ORTHO05D008685 8.3e-07 58.9 84 36.9


User provided reference genes

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