Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO265G0003 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 7.4e-83 310.5 152 100.0
SMO143G0271 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 1.4e-73 279.6 154 90.9
Pp3c19_15880 Physcomitrium patens HOM05D007308 ORTHO05D009157 5.0e-47 191.4 156 60.3
Mapoly0021s0141 Marchantia polymorpha HOM05D007308 ORTHO05D009157 5.5e-46 188.0 151 60.3
Os01g0965900 Oryza sativa ssp. japonica HOM05D007308 ORTHO05D009157 6.1e-45 184.5 152 59.9
Nn2g14273 Nelumbo nucifera HOM05D007308 ORTHO05D009157 3.9e-44 181.8 153 59.5
AagrBONN_evm.TU.Sc2ySwM_344.2550 Anthoceros agrestis HOM05D007308 ORTHO05D009157 5.2e-44 181.4 156 59.0
CSS0004692 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 8.8e-44 180.6 154 59.1
Prupe.2G071800 Prunus persica HOM05D007308 ORTHO05D009157 1.1e-43 180.3 154 57.1
CANSAT56G1109 Cannabis sativa HOM05D007308 ORTHO05D009157 2.6e-43 179.1 152 61.2
Potri.010G241700 Populus trichocarpa HOM05D007308 ORTHO05D009157 3.3e-43 178.7 152 59.9
Pp3c14_20980 Physcomitrium patens HOM05D007308 ORTHO05D009157 4.4e-43 178.3 151 58.3
Lj5g0023307 Lotus japonicus HOM05D007308 ORTHO05D009157 7.4e-43 177.6 152 59.2
MBI17_g22148_MAGBIO Magnolia biondii HOM05D007308 ORTHO05D009157 7.4e-43 177.6 152 59.9
Medtr1g090630 Medicago truncatula HOM05D007308 ORTHO05D009157 7.4e-43 177.6 152 59.9
arahy.Tifrunner.gnm1.ann1.I1QH9V Arachis hypogaea HOM05D007308 ORTHO05D009157 9.7e-43 177.2 152 57.9
arahy.Tifrunner.gnm1.ann1.ZU0NEU Arachis hypogaea HOM05D007308 ORTHO05D009157 9.7e-43 177.2 152 57.9
HPP92_005473 Vanilla planifolia HOM05D007308 ORTHO05D009157 9.7e-43 177.2 152 57.2
Zm00001eb362380 Zea mays HOM05D007308 ORTHO05D009157 2.2e-42 176.0 152 56.6
Nitab4.5_0001047g0020 Nicotiana tabacum HOM05D007308 ORTHO05D009157 2.8e-42 175.6 153 58.2
THA.LOC104816471 Tarenaya hassleriana HOM05D007308 ORTHO05D009157 3.7e-42 175.3 152 58.6
CDE02G0914 Ceratophyllum demersum HOM05D007308 ORTHO05D009157 4.8e-42 174.9 152 59.2
SalBow3G3836 Salvia bowleyana HOM05D007308 ORTHO05D009157 4.8e-42 174.9 154 58.4
PGSC0003DMG400001980 Solanum tuberosum HOM05D007308 ORTHO05D009157 4.8e-42 174.9 153 58.8
Cc02_g09470 Coffea canephora HOM05D007308 ORTHO05D009157 6.3e-42 174.5 153 57.5
Lalb_Chr02g0150981 Lupinus albus HOM05D007308 ORTHO05D009157 6.3e-42 174.5 152 58.6
Eucgr.J00279 Eucalyptus grandis HOM05D007308 ORTHO05D009157 8.2e-42 174.1 152 60.5
Sabra08G0011300 Salix brachista HOM05D007308 ORTHO05D009157 8.2e-42 174.1 154 58.4
Thecc.10G116800 Theobroma cacao HOM05D007308 ORTHO05D009157 1.1e-41 173.7 152 59.9
Gorai.013G010700 Gossypium raimondii HOM05D007308 ORTHO05D009157 1.8e-41 172.9 154 55.8
Sabra10G0189200 Salix brachista HOM05D000139 ORTHO05D000103 1.8e-41 172.9 152 58.6
Gohir.D13G010000 Gossypium hirsutum HOM05D007308 ORTHO05D009157 3.1e-41 172.2 154 55.8
GSVIVG01034647001 Vitis vinifera HOM05D007308 ORTHO05D009157 4.1e-41 171.8 152 57.9
Duzib106G1839 Durio zibethinus HOM05D007308 ORTHO05D009157 5.3e-41 171.4 152 59.2
Glyma.20G194000 Glycine max HOM05D007308 ORTHO05D009157 5.3e-41 171.4 152 55.9
Rhsim09G0141500 Rhododendron simsii HOM05D007308 ORTHO05D009157 5.3e-41 171.4 152 58.6
MD07G1062000 Malus domestica HOM05D007308 ORTHO05D009157 7.0e-41 171.0 152 57.9
Hund06794 Selenicereus undatus HOM05D007308 ORTHO05D009157 7.0e-41 171.0 153 57.5
Glyma.10G196200 Glycine max HOM05D007308 ORTHO05D009157 9.1e-41 170.6 152 55.9
PGR044G1814 Punica granatum HOM05D007308 ORTHO05D009157 9.1e-41 170.6 152 55.9
Gohir.A13G009300 Gossypium hirsutum HOM05D007308 ORTHO05D009157 1.6e-40 169.9 154 55.8
vmacro10315 Vaccinium macrocarpon HOM05D007308 ORTHO05D009157 1.6e-40 169.9 152 55.9
AT5G04830 Arabidopsis thaliana HOM05D007308 ORTHO05D009157 2.0e-40 169.5 152 57.2
AL6G14490 Arabidopsis lyrata HOM05D007308 ORTHO05D009157 2.6e-40 169.1 152 57.9
VMungo0720G2616 Vigna mungo HOM05D007308 ORTHO05D009157 2.6e-40 169.1 153 55.6
Sc20g0001110 Simmondsia chinensis HOM05D007308 ORTHO05D009157 3.5e-40 168.7 155 56.8
A03p01870 Brassica napus HOM05D007308 ORTHO05D009157 4.5e-40 168.3 152 57.9
BraA03t09557Z Brassica rapa HOM05D007308 ORTHO05D009157 4.5e-40 168.3 152 57.9
Aqoxy1G00692 Aquilegia oxysepala HOM05D007308 ORTHO05D009157 5.9e-40 167.9 153 56.9
Phvul.007G138800 Phaseolus vulgaris HOM05D007308 ORTHO05D009157 5.9e-40 167.9 154 56.5
Sp6g38000 Schrenkiella parvula HOM05D007308 ORTHO05D009157 5.9e-40 167.9 151 57.6
MSTRG.27555 Avicennia marina HOM05D007308 ORTHO05D009157 7.7e-40 167.5 152 57.2
Ciclev10016517m.g Citrus clementina HOM05D007308 ORTHO05D009157 7.7e-40 167.5 152 57.2
TWI15G0952 Tripterygium wilfordii HOM05D007308 ORTHO05D009157 7.7e-40 167.5 152 57.9
CiPaw.13G043100 Carya illinoinensis HOM05D007308 ORTHO05D009157 1.0e-39 167.2 152 57.9
Peaxi162Scf00725g00524 Petunia axillaris HOM05D007308 ORTHO05D009157 1.0e-39 167.2 152 55.9
QL04p047115 Quercus lobata HOM05D007308 ORTHO05D009157 1.0e-39 167.2 152 57.2
BcaB01g05916 Brassica carinata HOM05D007308 ORTHO05D009157 1.7e-39 166.4 152 57.2
C03p02230 Brassica napus HOM05D007308 ORTHO05D009157 1.7e-39 166.4 152 57.2
BolC3t12774H Brassica oleracea HOM05D007308 ORTHO05D009157 1.7e-39 166.4 152 57.2
Dinv08592 Davidia involucrata HOM05D007308 ORTHO05D009157 1.7e-39 166.4 152 57.2
PSO339G2601 Papaver somniferum HOM05D007308 ORTHO05D009157 2.2e-39 166.0 153 54.9
PGR044G1810 Punica granatum HOM05D007308 ORTHO05D009157 2.2e-39 166.0 152 55.3
TAR623G1715 Trochodendron aralioides HOM05D007308 ORTHO05D009157 3.8e-39 165.2 152 57.2
PSO384G3587 Papaver somniferum HOM05D007308 ORTHO05D009157 6.5e-39 164.5 153 54.9
ATR0772G202 Amborella trichopoda HOM05D007308 ORTHO05D009157 8.5e-39 164.1 152 53.9
A10p31380 Brassica napus HOM05D007308 ORTHO05D009157 8.5e-39 164.1 154 55.8
BcaC06g32190 Brassica carinata HOM05D007308 ORTHO05D009157 1.1e-38 163.7 154 55.8
SEGI_14438 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 1.1e-38 163.7 151 55.6
Sed0004755 Sechium edule HOM05D007308 ORTHO05D009157 1.9e-38 162.9 151 56.3
Aa31LG11G5650 Aethionema arabicum HOM05D007308 ORTHO05D009157 2.5e-38 162.5 151 55.6
ClCG05G021890 Citrullus lanatus HOM05D007308 ORTHO05D009157 2.5e-38 162.5 151 54.3
C09p72050 Brassica napus HOM05D007308 ORTHO05D009157 4.2e-38 161.8 154 55.2
CARHR208450 Cardamine hirsuta HOM05D007308 ORTHO05D009157 4.2e-38 161.8 150 56.7
Thhalv10014751m.g Eutrema salsugineum HOM05D007308 ORTHO05D009157 4.2e-38 161.8 150 56.7
Migut.F00856 Erythranthe guttata HOM05D007308 ORTHO05D009157 5.5e-38 161.4 153 54.9
Lalb_Chr21g0312841 Lupinus albus HOM05D007308 ORTHO05D009157 5.5e-38 161.4 152 53.3
HanXRQChr05g0147281 Helianthus annuus HOM05D007308 ORTHO05D009157 9.4e-38 160.6 154 55.2
Carub.0006s0371 Capsella rubella HOM05D007308 ORTHO05D009157 1.2e-37 160.2 151 54.3
CsaV3_5G035250 Cucumis sativus L. HOM05D007308 ORTHO05D009157 1.2e-37 160.2 151 55.0
Lsat_1_v5_gn_3_53161 Lactuca sativa HOM05D007308 ORTHO05D009157 1.2e-37 160.2 154 55.8
ECA232G3668 Erigeron canadensis HOM05D007308 ORTHO05D009157 1.6e-37 159.8 154 55.2
CSS0017788 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 2.1e-37 159.5 151 53.6
BraA10t45184Z Brassica rapa HOM05D007308 ORTHO05D009157 2.7e-37 159.1 161 54.0
BolC9t59950H Brassica oleracea HOM05D007308 ORTHO05D009157 3.6e-37 158.7 161 54.0
Sed0002245 Sechium edule HOM05D007308 ORTHO05D009157 1.4e-36 156.8 150 54.0
Hma1.2p1_0457F.1_g156910 Hydrangea macrophylla HOM05D007308 ORTHO05D009157 1.8e-36 156.4 151 52.3
Lj3C924T9 Lonicera japonica HOM05D007308 ORTHO05D009157 1.2e-35 153.7 185 49.7
unitig_32.g11899 Utricularia gibba HOM05D007308 ORTHO05D009157 9.7e-35 150.6 152 50.7
Solyc11g006505.1 Solanum lycopersicum HOM05D007308 ORTHO05D009157 1.1e-33 147.1 135 58.5
Sopen11g002410 Solanum pennellii HOM05D007308 ORTHO05D009157 1.4e-33 146.7 135 57.8
Pp3c1_28520 Physcomitrium patens HOM05D007308 ORTHO05D009157 3.1e-33 145.6 120 62.5
SGA_v2.0_scaffold272G46352 Striga asiatica HOM05D007308 ORTHO05D009157 9.1e-33 144.1 157 51.6
Haze_03470 Corylus avellana HOM05D007308 ORTHO05D009157 1.6e-32 143.3 162 50.0
SEGI_29808 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 1.5e-30 136.7 124 57.3
MELO3C012339.2 Cucumis melo HOM05D007308 ORTHO05D009157 1.9e-30 136.3 152 48.0
CiPaw.14G034600 Carya illinoinensis HOM05D007308 ORTHO05D009157 2.3e-28 129.4 132 53.8
Actinidia34730 Actinidia chinensis HOM05D000139 ORTHO05D000103 8.3e-26 120.9 109 59.6
RcHm_v2.0_Chr1g0331851 Rosa chinensis HOM05D007308 ORTHO05D009157 4.5e-24 115.2 109 56.9
Manes.10G060700 Manihot esculenta HOM05D007308 ORTHO05D009157 5.0e-23 111.7 121 51.2
Potri.008G017701 Populus trichocarpa HOM05D007308 ORTHO05D009157 1.5e-19 100.1 82 54.9
Atru.BG.262.p Acer truncatum HOM05D007308 ORTHO05D009157 2.4e-17 92.8 79 58.2
BcaNung05151 Brassica carinata HOM05D007308 ORTHO05D009157 2.0e-16 89.7 142 41.5
Pp3c2_31450 Physcomitrium patens HOM05D007308 ORTHO05D009157 2.0e-16 89.7 85 56.5
CBR_g30213 Chara braunii HOM05D007308 ORTHO05D009157 4.5e-16 88.6 142 36.6
PGSC0003DMG400007605 Solanum tuberosum HOM05D000011 ORTHO05D000018 1.0e-07 60.8 45 55.6
Sopen11g002430 Solanum pennellii HOM05D000011 ORTHO05D000018 9.5e-06 54.3 48 47.9


User provided reference genes

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