Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO259G0015 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 7.2e-198 693.7 354 100.0
SMO259G0051 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 7.4e-195 683.7 358 98.3
SMO313G0001 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 7.0e-193 677.2 358 97.5
SMO108G0002 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 3.0e-143 512.3 361 78.9
SMO108G0004 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 6.2e-133 478.0 320 81.6
SMO108G0005 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 9.6e-118 427.6 324 75.0
SMO108G0001 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 2.8e-117 426.0 324 74.7
SMO108G0003 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 2.8e-117 426.0 324 74.7
SMO259G0055 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 4.5e-99 365.5 197 94.9
SMO259G0024 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 1.1e-89 334.3 182 94.5
SMO259G0021 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 7.2e-89 331.6 179 95.5
SMO259G0053 Selaginella moellendorffii HOM05D012679 ORTHO05D378244 1.5e-83 313.9 169 95.9
SMO229G0003 Selaginella moellendorffii HOM05D012679 ORTHO05D375076 4.5e-83 312.4 169 95.3
SMO229G0005 Selaginella moellendorffii HOM05D012679 ORTHO05D374820 4.5e-83 312.4 169 95.3
SMO229G0018 Selaginella moellendorffii HOM05D012679 ORTHO05D379110 4.5e-83 312.4 169 95.3
SMO229G0040 Selaginella moellendorffii HOM05D012679 ORTHO05D379409 4.5e-83 312.4 169 95.3
SMO259G0027 Selaginella moellendorffii HOM05D012679 ORTHO05D375777 1.2e-72 277.7 149 96.6
SMO174G0204 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 2.3e-63 246.9 223 65.9
SMO259G0038 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 3.1e-60 236.5 162 79.6
SMO248G0001 Selaginella moellendorffii HOM05D012679 ORTHO05D376469 4.6e-43 179.5 104 91.3
Lsat_1_v5_gn_8_89520 Lactuca sativa HOM05D005051 ORTHO05D005945 3.0e-26 123.6 145 48.3
SEGI_10192 Sequoiadendron giganteum HOM05D005051 ORTHO05D005945 9.5e-25 118.6 165 42.4
SEGI_29510 Sequoiadendron giganteum HOM05D005051 ORTHO05D005945 9.5e-25 118.6 165 42.4
CDE05G0682 Ceratophyllum demersum HOM05D005051 ORTHO05D005945 2.1e-24 117.5 165 43.0
Oeu018495.2 Olea europaea HOM05D005051 ORTHO05D005945 4.7e-24 116.3 162 42.6
Lj2A1128T45 Lonicera japonica HOM05D005051 ORTHO05D005945 6.2e-24 115.9 160 43.8
vmacro02772 Vaccinium macrocarpon HOM05D005051 ORTHO05D005945 6.2e-24 115.9 164 45.1
MELO3C021052.2 Cucumis melo HOM05D005051 ORTHO05D005945 1.4e-23 114.8 162 41.4
FAN15G1450 Fragaria x ananassa HOM05D005051 ORTHO05D005945 1.4e-23 114.8 170 43.5
QL09p052190 Quercus lobata HOM05D005051 ORTHO05D005945 1.4e-23 114.8 127 51.2
QL09p053053 Quercus lobata HOM05D005051 ORTHO05D005945 1.4e-23 114.8 127 51.2
Sc17g0002210 Simmondsia chinensis HOM05D005051 ORTHO05D005945 2.4e-23 114.0 158 44.3
Cc01_g16860 Coffea canephora HOM05D005051 ORTHO05D005945 3.1e-23 113.6 187 40.6
COL.COLO4_15648 Corchorus olitorius HOM05D005051 ORTHO05D005945 3.1e-23 113.6 164 45.1
FvH4_2g18730 Fragaria vesca HOM05D005051 ORTHO05D005945 3.1e-23 113.6 170 42.9
FAN24G2416 Fragaria x ananassa HOM05D005051 ORTHO05D005945 3.1e-23 113.6 170 42.9
Nitab4.5_0000045g0340 Nicotiana tabacum HOM05D005051 ORTHO05D005945 3.1e-23 113.6 186 40.3
FAN27G0551 Fragaria x ananassa HOM05D005051 ORTHO05D005945 4.0e-23 113.2 170 42.9
MD13G1217900 Malus domestica HOM05D005051 ORTHO05D005945 5.2e-23 112.8 160 42.5
Oeu035785.1 Olea europaea HOM05D005051 ORTHO05D005945 5.2e-23 112.8 162 41.4
Prupe.8G200800 Prunus persica HOM05D005051 ORTHO05D005945 5.2e-23 112.8 169 43.8
CsaV3_7G026000 Cucumis sativus L. HOM05D005051 ORTHO05D005945 6.8e-23 112.5 162 42.0
CSS0047345 Camellia sinensis var. sinensis HOM05D005051 ORTHO05D005945 8.9e-23 112.1 164 45.7
Dinv19188 Davidia involucrata HOM05D005051 ORTHO05D005945 8.9e-23 112.1 168 41.7
Migut.D02493 Erythranthe guttata HOM05D005051 ORTHO05D005945 1.2e-22 111.7 157 42.7
Sed0004391 Sechium edule HOM05D005051 ORTHO05D005945 1.5e-22 111.3 168 41.7
Sed0023522 Sechium edule HOM05D005051 ORTHO05D005945 1.5e-22 111.3 169 39.6
CiPaw.03G147700 Carya illinoinensis HOM05D005051 ORTHO05D005945 2.0e-22 110.9 168 42.3
AL3G18390 Arabidopsis lyrata HOM05D005051 ORTHO05D005945 2.6e-22 110.5 159 41.5
Ciclev10019161m.g Citrus clementina HOM05D005051 ORTHO05D005945 2.6e-22 110.5 165 41.2
Medtr8g013045 Medicago truncatula HOM05D005051 ORTHO05D005945 2.6e-22 110.5 163 42.9
ATR0564G162 Amborella trichopoda HOM05D005051 ORTHO05D005945 3.4e-22 110.2 128 49.2
Haze_24821 Corylus avellana HOM05D005051 ORTHO05D005945 3.4e-22 110.2 198 40.9
RcHm_v2.0_Chr6g0284351 Rosa chinensis HOM05D005051 ORTHO05D005945 3.4e-22 110.2 170 42.9
SalBow6G3716 Salvia bowleyana HOM05D005051 ORTHO05D005945 3.4e-22 110.2 167 44.3
Cfa002585 Carpinus fangiana HOM05D005051 ORTHO05D005945 4.4e-22 109.8 198 40.4
ClCG09G008890 Citrullus lanatus HOM05D005051 ORTHO05D005945 4.4e-22 109.8 162 40.1
Actinidia30063 Actinidia chinensis HOM05D005051 ORTHO05D005945 5.8e-22 109.4 178 42.7
AagrBONN_evm.TU.Sc2ySwM_368.938 Anthoceros agrestis HOM05D005051 ORTHO05D005945 5.8e-22 109.4 130 48.5
Gorai.001G188000 Gossypium raimondii HOM05D005051 ORTHO05D005945 5.8e-22 109.4 179 41.3
Cpa.g.sc8.135 Carica papaya HOM05D005051 ORTHO05D005945 7.6e-22 109.0 163 43.6
ECA236G0910 Erigeron canadensis HOM05D005051 ORTHO05D005945 7.6e-22 109.0 161 42.2
HanXRQChr04g0108251 Helianthus annuus HOM05D005051 ORTHO05D005945 7.6e-22 109.0 127 48.8
Peaxi162Scf00398g00089 Petunia axillaris HOM05D005051 ORTHO05D005945 7.6e-22 109.0 167 39.5
Sopen09g023140 Solanum pennellii HOM05D005051 ORTHO05D005945 7.6e-22 109.0 169 39.1
SGA_v2.0_scaffold171G38944 Striga asiatica HOM05D005051 ORTHO05D005945 7.6e-22 109.0 149 43.6
unitig_899.g15019 Utricularia gibba HOM05D005051 ORTHO05D005945 7.6e-22 109.0 186 39.2
Gohir.D07G164100 Gossypium hirsutum HOM05D005051 ORTHO05D005945 1.3e-21 108.2 179 40.8
MSTRG.18843 Avicennia marina HOM05D005051 ORTHO05D005945 1.7e-21 107.8 163 39.3
PGSC0003DMG400023098 Solanum tuberosum HOM05D005051 ORTHO05D005945 1.7e-21 107.8 166 39.2
Atru.chr6.1506 Acer truncatum HOM05D005051 ORTHO05D005945 2.2e-21 107.5 162 40.7
Carub.0003s0666 Capsella rubella HOM05D005051 ORTHO05D005945 2.2e-21 107.5 178 39.9
CARHR081740 Cardamine hirsuta HOM05D005051 ORTHO05D005945 2.2e-21 107.5 159 40.9
DCAR_012658 Daucus carota HOM05D005051 ORTHO05D005945 2.2e-21 107.5 164 41.5
Solyc09g059960.3 Solanum lycopersicum HOM05D005051 ORTHO05D005945 2.2e-21 107.5 169 39.1
THA.LOC104818965 Tarenaya hassleriana HOM05D005051 ORTHO05D005945 2.2e-21 107.5 170 40.0
Ah.02g115620 Amaranthus hybridus HOM05D005051 ORTHO05D005945 2.9e-21 107.1 158 43.0
Ca_23237_v3 Cicer arietinum L. HOM05D005051 ORTHO05D005945 2.9e-21 107.1 155 43.2
GSVIVG01011065001 Vitis vinifera HOM05D005051 ORTHO05D005945 2.9e-21 107.1 157 42.0
Lalb_Chr13g0291091 Lupinus albus HOM05D005051 ORTHO05D005945 3.8e-21 106.7 161 45.3
TPR.G17135 Trifolium pratense HOM05D005051 ORTHO05D005945 3.8e-21 106.7 162 42.0
MD16G1223000 Malus domestica HOM05D005051 ORTHO05D005945 4.9e-21 106.3 187 39.0
PSO339G3208 Papaver somniferum HOM05D005051 ORTHO05D005945 4.9e-21 106.3 130 45.4
TAR365G1079 Trochodendron aralioides HOM05D005051 ORTHO05D005945 4.9e-21 106.3 193 39.4
Gohir.A07G158000 Gossypium hirsutum HOM05D005051 ORTHO05D005945 6.4e-21 105.9 173 42.2
Potri.014G190600 Populus trichocarpa HOM05D005051 ORTHO05D005945 6.4e-21 105.9 187 40.6
Aa31LG5G17700 Aethionema arabicum HOM05D005051 ORTHO05D005945 8.4e-21 105.5 159 40.3
Manes.13G046400 Manihot esculenta HOM05D005051 ORTHO05D005945 8.4e-21 105.5 168 41.7
Mapoly0173s0012 Marchantia polymorpha HOM05D005051 ORTHO05D005945 8.4e-21 105.5 223 35.0
PSO384G3368 Papaver somniferum HOM05D005051 ORTHO05D005945 1.1e-20 105.1 174 40.2
VMungo1309G1922 Vigna mungo HOM05D005051 ORTHO05D005945 1.1e-20 105.1 164 43.9
Glyma.16G101100 Glycine max HOM05D005051 ORTHO05D005945 1.4e-20 104.8 173 41.6
THA.LOC104802665 Tarenaya hassleriana HOM05D005051 ORTHO05D005945 1.4e-20 104.8 158 44.3
Phvul.010G020500 Phaseolus vulgaris HOM05D005051 ORTHO05D005945 1.9e-20 104.4 162 42.0
Psat4g199920 Pisum sativum HOM05D005051 ORTHO05D005945 1.9e-20 104.4 162 41.4
AT3G07140 Arabidopsis thaliana HOM05D005051 ORTHO05D005945 2.4e-20 104.0 159 39.6
Gohir.A11G139100 Gossypium hirsutum HOM05D005051 ORTHO05D005945 2.4e-20 104.0 194 38.7
Sabra14G0142400 Salix brachista HOM05D005051 ORTHO05D005945 2.4e-20 104.0 193 38.9
A05p41070 Brassica napus HOM05D005051 ORTHO05D005945 3.2e-20 103.6 184 41.3
C05p60240 Brassica napus HOM05D005051 ORTHO05D005945 3.2e-20 103.6 157 40.8
BolC5t34674H Brassica oleracea HOM05D005051 ORTHO05D005945 3.2e-20 103.6 157 40.8
CAN.G3.1 Capsicum annuum HOM05D005051 ORTHO05D005945 3.2e-20 103.6 167 37.7
Duzib138G1384 Durio zibethinus HOM05D005051 ORTHO05D005945 3.2e-20 103.6 162 42.0
Gohir.D11G145300 Gossypium hirsutum HOM05D005051 ORTHO05D005945 3.2e-20 103.6 170 41.8
BcaC05g29842 Brassica carinata HOM05D005051 ORTHO05D005945 4.2e-20 103.2 157 40.8
Nn2g14125 Nelumbo nucifera HOM05D005051 ORTHO05D005945 4.2e-20 103.2 129 46.5
TWI36G0473 Tripterygium wilfordii HOM05D005051 ORTHO05D005945 4.2e-20 103.2 162 40.7
Gorai.007G155800 Gossypium raimondii HOM05D005051 ORTHO05D005945 5.4e-20 102.8 170 41.2
Thecc.01G222800 Theobroma cacao HOM05D005051 ORTHO05D005945 5.4e-20 102.8 200 39.5
BraA05t22834Z Brassica rapa HOM05D005051 ORTHO05D005945 7.1e-20 102.4 184 40.8
AUR62008933 Chenopodium quinoa HOM05D005051 ORTHO05D005945 7.1e-20 102.4 162 41.4
Glyma.03G064400 Glycine max HOM05D005051 ORTHO05D005945 7.1e-20 102.4 173 41.6
Lj3g0013392 Lotus japonicus HOM05D005051 ORTHO05D005945 7.1e-20 102.4 162 42.6
arahy.Tifrunner.gnm1.ann1.8DP3DE Arachis hypogaea HOM05D005051 ORTHO05D005945 9.2e-20 102.1 173 41.6
Ca_23236_v3 Cicer arietinum L. HOM05D005051 ORTHO05D005945 9.2e-20 102.1 162 40.7
Duzib211G0096 Durio zibethinus HOM05D005051 ORTHO05D005945 9.2e-20 102.1 180 41.1
Eucgr.E03305 Eucalyptus grandis HOM05D005051 ORTHO05D005945 9.2e-20 102.1 183 39.3
Aqoxy4G00040 Aquilegia oxysepala HOM05D005051 ORTHO05D005945 1.2e-19 101.7 189 38.1
EL10Ac7g17867 Beta vulgaris HOM05D005051 ORTHO05D005945 1.2e-19 101.7 158 39.2
Sp3g06080 Schrenkiella parvula HOM05D005051 ORTHO05D005945 1.2e-19 101.7 198 35.9
Hund18405 Selenicereus undatus HOM05D005051 ORTHO05D005945 1.2e-19 101.7 162 40.1
BcaC05g29752 Brassica carinata HOM05D005051 ORTHO05D005945 1.6e-19 101.3 194 37.1
Thhalv10020265m.g Eutrema salsugineum HOM05D005051 ORTHO05D005945 1.6e-19 101.3 160 38.1
arahy.Tifrunner.gnm1.ann1.SK15G6 Arachis hypogaea HOM05D005051 ORTHO05D005945 3.5e-19 100.1 173 41.0
AUR62001109 Chenopodium quinoa HOM05D005051 ORTHO05D005945 4.6e-19 99.8 163 39.9
PGR083G2429 Punica granatum HOM05D005051 ORTHO05D005945 1.0e-18 98.6 184 37.0
Medtr8g013050 Medicago truncatula HOM05D005051 ORTHO05D005945 8.7e-18 95.5 120 44.2
SMO229G0017 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 3.3e-17 93.6 54 87.0
Pp3c21_19350 Physcomitrium patens HOM05D005051 ORTHO05D005945 9.6e-17 92.0 131 41.2
CBR_g44939 Chara braunii HOM05D005051 ORTHO05D005945 1.2e-16 91.7 183 34.4
Zm00001eb269850 Zea mays HOM05D005051 ORTHO05D005945 3.6e-16 90.1 187 33.7
SHI23570 Sapria himalayana HOM05D005051 ORTHO05D005945 4.7e-16 89.7 167 35.9
Actinidia31469 Actinidia chinensis HOM05D005051 ORTHO05D005945 5.3e-15 86.3 118 45.8
SMO259G0028 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 2.4e-12 77.4 45 86.7
COL.COLO4_36899 Corchorus olitorius HOM05D005051 ORTHO05D005945 9.3e-12 75.5 50 72.0
Medtr6g061260 Medicago truncatula HOM05D005051 ORTHO05D005945 2.3e-10 70.9 100 44.0
PRCOL_00003451 Prasinoderma coloniale HOM05D002267 ORTHO05D005902 8.7e-10 68.9 202 33.7


User provided reference genes

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