Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO252G0024 Selaginella moellendorffii HOM05D004011 ORTHO05D023129 4.7e-185 651.0 311 100.0
SMO331G0064 Selaginella moellendorffii HOM05D004739 ORTHO05D005784 1.1e-98 364.0 215 82.8
SMO203G0050 Selaginella moellendorffii HOM05D004011 ORTHO05D023129 1.1e-96 357.5 212 84.0
SMO110G0005 Selaginella moellendorffii HOM05D004011 ORTHO05D023129 2.7e-84 316.2 303 60.1
SMO331G0015 Selaginella moellendorffii HOM05D004011 ORTHO05D023129 4.8e-81 305.4 186 81.2
SMO331G0031 Selaginella moellendorffii HOM05D004011 ORTHO05D023129 6.5e-78 295.0 306 57.5
SMO331G0048 Selaginella moellendorffii HOM05D004011 ORTHO05D005290 1.3e-41 174.5 188 54.8
SMO331G0061 Selaginella moellendorffii HOM05D004011 ORTHO05D023129 2.9e-41 173.3 221 49.3
SMO110G0012 Selaginella moellendorffii HOM05D004739 ORTHO05D005784 1.5e-34 151.0 311 39.2
Peaxi162Scf00209g00842 Petunia axillaris HOM05D004011 ORTHO05D005290 3.9e-14 83.2 200 29.5
Sopen05g002700 Solanum pennellii HOM05D004011 ORTHO05D005290 6.7e-14 82.4 200 28.0
CAN.G27.36 Capsicum annuum HOM05D004011 ORTHO05D005290 1.1e-13 81.6 199 29.1
Solyc05g006760.4 Solanum lycopersicum HOM05D004011 ORTHO05D005290 1.5e-13 81.3 200 28.0
Cfa009061 Carpinus fangiana HOM05D004011 ORTHO05D005290 1.9e-13 80.9 201 30.8
Actinidia19850 Actinidia chinensis HOM05D004011 ORTHO05D005290 5.6e-13 79.3 177 30.5
RcHm_v2.0_Chr4g0445221 Rosa chinensis HOM05D004011 ORTHO05D005290 7.4e-13 79.0 176 30.7
Haze_12040 Corylus avellana HOM05D004011 ORTHO05D005290 9.6e-13 78.6 192 29.2
Medtr5g037400 Medicago truncatula HOM05D004011 ORTHO05D005290 9.6e-13 78.6 177 29.4
BcaB03g14114 Brassica carinata HOM05D004011 ORTHO05D005290 1.3e-12 78.2 178 30.9
Lj2g0011655 Lotus japonicus HOM05D004011 ORTHO05D005290 1.3e-12 78.2 177 29.4
Nitab4.5_0001726g0090 Nicotiana tabacum HOM05D004011 ORTHO05D005290 1.3e-12 78.2 200 28.5
Aqoxy3G03233 Aquilegia oxysepala HOM05D004011 ORTHO05D005290 1.6e-12 77.8 177 29.9
Lalb_Chr09g0326751 Lupinus albus HOM05D004011 ORTHO05D005290 1.6e-12 77.8 176 30.7
CANSAT01G0183 Cannabis sativa HOM05D004011 ORTHO05D005290 2.1e-12 77.4 176 28.4
Nitab4.5_0000408g0060 Nicotiana tabacum HOM05D004011 ORTHO05D005290 2.8e-12 77.0 200 28.5
Potri.010G035400 Populus trichocarpa HOM05D004011 ORTHO05D005290 2.8e-12 77.0 176 29.0
Prupe.1G265000 Prunus persica HOM05D004011 ORTHO05D005290 2.8e-12 77.0 176 29.5
AUR62026479 Chenopodium quinoa HOM05D004011 ORTHO05D005290 3.7e-12 76.6 177 31.1
FvH4_4g35610 Fragaria vesca HOM05D004011 ORTHO05D005290 3.7e-12 76.6 176 29.5
FAN12G0945 Fragaria x ananassa HOM05D004011 ORTHO05D005290 3.7e-12 76.6 176 29.5
FAN22G2312 Fragaria x ananassa HOM05D004011 ORTHO05D005290 3.7e-12 76.6 176 29.5
Gorai.002G165100 Gossypium raimondii HOM05D004011 ORTHO05D005290 3.7e-12 76.6 182 29.7
Manes.01G192600 Manihot esculenta HOM05D004011 ORTHO05D005290 3.7e-12 76.6 177 30.5
Aa31LG7G8050 Aethionema arabicum HOM05D004011 ORTHO05D005290 4.8e-12 76.3 177 29.9
arahy.Tifrunner.gnm1.ann1.SQ07EG Arachis hypogaea HOM05D004011 ORTHO05D005290 4.8e-12 76.3 141 30.5
CiPaw.05G142000 Carya illinoinensis HOM05D004011 ORTHO05D005290 4.8e-12 76.3 176 30.7
Cc11_g13670 Coffea canephora HOM05D004011 ORTHO05D005290 4.8e-12 76.3 177 29.4
Gohir.A01G142100 Gossypium hirsutum HOM05D004011 ORTHO05D005290 4.8e-12 76.3 182 29.1
Gohir.D01G133600 Gossypium hirsutum HOM05D004011 ORTHO05D005290 4.8e-12 76.3 182 29.1
THA.LOC104822089 Tarenaya hassleriana HOM05D004011 ORTHO05D005290 6.2e-12 75.9 181 29.8
GSVIVG01020097001 Vitis vinifera HOM05D004011 ORTHO05D005290 6.2e-12 75.9 176 31.2
Ciclev10031073m.g Citrus clementina HOM05D004011 ORTHO05D005290 8.1e-12 75.5 194 28.4
MD16G1081000 Malus domestica HOM05D004011 ORTHO05D005290 8.1e-12 75.5 176 29.5
Cc11_g13690 Coffea canephora HOM05D004011 ORTHO05D005290 1.1e-11 75.1 176 29.5
FAN07G2799 Fragaria x ananassa HOM05D004011 ORTHO05D005290 1.1e-11 75.1 176 29.0
Hund05926 Selenicereus undatus HOM05D004011 ORTHO05D005290 1.1e-11 75.1 207 28.5
TAR622G0281 Trochodendron aralioides HOM05D004011 ORTHO05D005290 1.1e-11 75.1 176 30.1
arahy.Tifrunner.gnm1.ann1.XM7912 Arachis hypogaea HOM05D004011 ORTHO05D005290 1.4e-11 74.7 176 27.8
Lj3C1043T17 Lonicera japonica HOM05D004011 ORTHO05D005290 1.4e-11 74.7 177 28.8
Sp1g21620 Schrenkiella parvula HOM05D004011 ORTHO05D005290 1.4e-11 74.7 177 31.1
A07p13510 Brassica napus HOM05D004011 ORTHO05D005290 1.8e-11 74.3 178 30.9
Lsat_1_v5_gn_8_163421 Lactuca sativa HOM05D004011 ORTHO05D005290 1.8e-11 74.3 177 29.4
PGSC0003DMG400022621 Solanum tuberosum HOM05D004011 ORTHO05D005290 1.8e-11 74.3 170 29.4
TPR.G26722 Trifolium pratense HOM05D004011 ORTHO05D005290 1.8e-11 74.3 176 29.0
CSS0048676 Camellia sinensis var. sinensis HOM05D004011 ORTHO05D005290 2.4e-11 73.9 193 26.9
Nn3g17098 Nelumbo nucifera HOM05D004011 ORTHO05D005290 2.4e-11 73.9 183 27.9
QL03p066429 Quercus lobata HOM05D004011 ORTHO05D005290 2.4e-11 73.9 182 30.8
Ca_04688_v3 Cicer arietinum L. HOM05D004011 ORTHO05D005290 3.1e-11 73.6 177 30.5
PSO423G0236 Papaver somniferum HOM05D004011 ORTHO05D005290 3.1e-11 73.6 176 29.5
Thecc.02G234800 Theobroma cacao HOM05D004011 ORTHO05D005290 3.1e-11 73.6 176 30.7
ATR0001G025 Amborella trichopoda HOM05D004011 ORTHO05D005290 4.0e-11 73.2 183 27.9
BcaC05g26340 Brassica carinata HOM05D004011 ORTHO05D005290 4.0e-11 73.2 178 29.2
A07p13370 Brassica napus HOM05D004011 ORTHO05D005290 4.0e-11 73.2 178 30.3
Atru.chr11.1880 Acer truncatum HOM05D004011 ORTHO05D005290 5.3e-11 72.8 178 28.7
AT1G27150 Arabidopsis thaliana HOM05D004011 ORTHO05D005290 5.3e-11 72.8 177 28.8
BcaC06g35087 Brassica carinata HOM05D004011 ORTHO05D005290 5.3e-11 72.8 179 29.6
A09p40530 Brassica napus HOM05D004011 ORTHO05D005290 5.3e-11 72.8 194 27.8
C07p20000 Brassica napus HOM05D004011 ORTHO05D005290 5.3e-11 72.8 179 29.6
BolC7t42519H Brassica oleracea HOM05D004011 ORTHO05D005290 5.3e-11 72.8 179 29.6
BraA07t29109Z Brassica rapa HOM05D004011 ORTHO05D005290 5.3e-11 72.8 180 30.6
BraA09t39549Z Brassica rapa HOM05D004011 ORTHO05D005290 5.3e-11 72.8 194 27.8
COL.COLO4_36215 Corchorus olitorius HOM05D004011 ORTHO05D005290 5.3e-11 72.8 176 30.7
HanXRQChr12g0371081 Helianthus annuus HOM05D004011 ORTHO05D005290 5.3e-11 72.8 177 27.7
unitig_22.g6920 Utricularia gibba HOM05D004011 ORTHO05D005290 5.3e-11 72.8 188 29.3
EL10Ac6g13125 Beta vulgaris HOM05D004011 ORTHO05D005290 6.9e-11 72.4 177 29.9
Eucgr.B03399 Eucalyptus grandis HOM05D004011 ORTHO05D005290 6.9e-11 72.4 176 29.0
Pp3c17_17430 Physcomitrium patens HOM05D004011 ORTHO05D005290 6.9e-11 72.4 182 32.4
C05p23640 Brassica napus HOM05D004011 ORTHO05D005290 9.0e-11 72.0 178 28.7
CARHR024720 Cardamine hirsuta HOM05D004011 ORTHO05D005290 9.0e-11 72.0 177 29.4
ECA248G0235 Erigeron canadensis HOM05D004011 ORTHO05D005290 9.0e-11 72.0 177 28.2
Oeu028543.1 Olea europaea HOM05D004011 ORTHO05D005290 9.0e-11 72.0 178 28.1
TWI36G1736 Tripterygium wilfordii HOM05D004011 ORTHO05D005290 9.0e-11 72.0 172 32.0
Sc11g0001560 Simmondsia chinensis HOM05D004011 ORTHO05D005290 1.2e-10 71.6 177 29.4
Os03g0689900 Oryza sativa ssp. japonica HOM05D004011 ORTHO05D005290 1.5e-10 71.2 182 28.6
arahy.Tifrunner.gnm1.ann1.DHW1RD Arachis hypogaea HOM05D004011 ORTHO05D005290 2.0e-10 70.9 171 31.0
Carub.0001s2380 Capsella rubella HOM05D004011 ORTHO05D005290 2.0e-10 70.9 177 28.8
DCAR_031068 Daucus carota HOM05D004011 ORTHO05D005290 2.0e-10 70.9 192 28.1
Psat2g115960 Pisum sativum HOM05D004011 ORTHO05D005290 2.0e-10 70.9 176 29.0
BcaB07g32390 Brassica carinata HOM05D004011 ORTHO05D005290 3.4e-10 70.1 194 28.4
CsaV3_5G032130 Cucumis sativus L. HOM05D004011 ORTHO05D005290 3.4e-10 70.1 186 28.5
FAN17G1440 Fragaria x ananassa HOM05D004011 ORTHO05D005290 3.4e-10 70.1 176 28.4
Sed0020834 Sechium edule HOM05D004011 ORTHO05D005290 3.4e-10 70.1 176 29.0
Duzib251G0283 Durio zibethinus HOM05D004011 ORTHO05D005290 4.5e-10 69.7 176 29.0
PSO782G5642 Papaver somniferum HOM05D004011 ORTHO05D005290 4.5e-10 69.7 170 27.1
CDE06G1386 Ceratophyllum demersum HOM05D004011 ORTHO05D005290 5.8e-10 69.3 183 27.9
VMungo1215G2281 Vigna mungo HOM05D004011 ORTHO05D005290 5.8e-10 69.3 177 28.8
AL1G38330 Arabidopsis lyrata HOM05D004011 ORTHO05D005290 7.6e-10 68.9 177 27.7
MELO3C012048.2 Cucumis melo HOM05D004011 ORTHO05D005290 7.6e-10 68.9 176 28.4
BolC5t31078H Brassica oleracea HOM05D004011 ORTHO05D005290 1.0e-09 68.6 154 31.8
BraA08t34710Z Brassica rapa HOM05D004011 ORTHO05D005290 1.0e-09 68.6 177 29.4
Thhalv10007555m.g Eutrema salsugineum HOM05D004011 ORTHO05D005290 1.0e-09 68.6 176 30.1
Migut.L01360 Erythranthe guttata HOM05D004011 ORTHO05D005290 1.7e-09 67.8 179 29.1
Glyma.01G040300 Glycine max HOM05D004011 ORTHO05D005290 1.7e-09 67.8 176 28.4
Glyma.02G024500 Glycine max HOM05D004011 ORTHO05D005290 1.7e-09 67.8 183 27.9
BcaC07g39250 Brassica carinata HOM05D004011 ORTHO05D005290 2.2e-09 67.4 177 27.7
C08p22550 Brassica napus HOM05D004011 ORTHO05D005290 2.2e-09 67.4 177 27.7
BolC8t49891H Brassica oleracea HOM05D004011 ORTHO05D005290 2.2e-09 67.4 177 27.7
ClCG05G024760 Citrullus lanatus HOM05D004011 ORTHO05D005290 2.2e-09 67.4 176 29.0
THA.LOC104822935 Tarenaya hassleriana HOM05D004011 ORTHO05D005290 2.9e-09 67.0 176 31.2
BcaC07g37560 Brassica carinata HOM05D004011 ORTHO05D005290 3.8e-09 66.6 177 27.7
A08p27740 Brassica napus HOM05D004011 ORTHO05D005290 3.8e-09 66.6 177 28.8
Zm00001eb053520 Zea mays HOM05D004011 ORTHO05D005290 3.8e-09 66.6 182 28.6
BcaB03g14111 Brassica carinata HOM05D004011 ORTHO05D005290 6.5e-09 65.9 178 28.1
BolC8t47901H Brassica oleracea HOM05D004011 ORTHO05D005290 6.5e-09 65.9 178 27.5
AT1G27110 Arabidopsis thaliana HOM05D004011 ORTHO05D005290 8.4e-09 65.5 177 28.8
Thhalv10007979m.g Eutrema salsugineum HOM05D004011 ORTHO05D005290 8.4e-09 65.5 177 27.7
Phvul.002G080300 Phaseolus vulgaris HOM05D004011 ORTHO05D005290 8.4e-09 65.5 177 28.2
Sp1g21670 Schrenkiella parvula HOM05D004011 ORTHO05D005290 8.4e-09 65.5 177 28.2
arahy.Tifrunner.gnm1.ann1.NNWV08 Arachis hypogaea HOM05D004011 ORTHO05D005290 1.1e-08 65.1 134 33.6
CARHR024790 Cardamine hirsuta HOM05D004011 ORTHO05D005290 1.1e-08 65.1 177 28.2
BcaB03g11978 Brassica carinata HOM05D004011 ORTHO05D005290 1.4e-08 64.7 176 28.4
BolC5t31073H Brassica oleracea HOM05D004011 ORTHO05D005290 1.4e-08 64.7 179 27.9
Mapoly0042s0014 Marchantia polymorpha HOM05D004011 ORTHO05D005290 1.9e-08 64.3 182 29.1
Sabra10G0029400 Salix brachista HOM05D004011 ORTHO05D005290 4.2e-08 63.2 195 26.2
Medtr5g037420 Medicago truncatula HOM05D004011 ORTHO05D005290 1.2e-07 61.6 76 39.5
SGA_v2.0_scaffold166G38295 Striga asiatica HOM05D004011 ORTHO05D005290 1.6e-07 61.2 116 33.6
A08p08630 Brassica napus HOM05D004011 ORTHO05D005290 1.3e-06 58.2 173 26.6
vmacro01220 Vaccinium macrocarpon HOM05D004011 ORTHO05D005290 5.1e-06 56.2 82 36.6
Hma1.2p1_1045F.1_g251340 Hydrangea macrophylla HOM05D004011 ORTHO05D005290 8.7e-06 55.5 169 27.8


User provided reference genes

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